RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
CCS-205ENST00000530384 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
CCS-205ENST00000530384 A8MUN3 132 aa7.79□□□□□ -1.16
CCS-205ENST00000530384 K7ERU9 68 aa7.78□□□□□ -1.16
CCS-205ENST00000530384 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
CCS-205ENST00000530384 H3BPC8 53 aa7.75□□□□□ -1.17
CCS-205ENST00000530384 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
CCS-205ENST00000530384 NDUFC1O43677 76 aa7.74□□□□□ -1.17
CCS-205ENST00000530384 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
CCS-205ENST00000530384 IMUPQ9GZP8 106 aa7.71□□□□□ -1.18
CCS-205ENST00000530384 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
CCS-205ENST00000530384 H0YAA0 97 aa7.65□□□□□ -1.18
CCS-205ENST00000530384 Q5VV11 94 aa7.65□□□□□ -1.18
CCS-205ENST00000530384 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
CCS-205ENST00000530384 MT-ATP8P03928 68 aa7.63□□□□□ -1.19
CCS-205ENST00000530384 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
CCS-205ENST00000530384 MT1BP07438 61 aa7.61□□□□□ -1.19
CCS-205ENST00000530384 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
CCS-205ENST00000530384 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
CCS-205ENST00000530384 SYNE2Q8WXH0 6885 aaKnown RBP7.58□□□□□ -1.2
CCS-205ENST00000530384 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
CCS-205ENST00000530384 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
CCS-205ENST00000530384 A6NN06 94 aa7.51□□□□□ -1.21
CCS-205ENST00000530384 PCP4P48539 62 aa7.51□□□□□ -1.21
CCS-205ENST00000530384 ACYP2P14621 99 aa7.43□□□□□ -1.22
CCS-205ENST00000530384 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
CCS-205ENST00000530384 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
CCS-205ENST00000530384 P0C880 135 aa7.37□□□□□ -1.23
CCS-205ENST00000530384 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
CCS-205ENST00000530384 R4GN34 69 aa7.37□□□□□ -1.23
CCS-205ENST00000530384 SNURFQ9Y675 71 aa7.36□□□□□ -1.23
CCS-205ENST00000530384 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
CCS-205ENST00000530384 SERP2Q8N6R1 65 aa7.33□□□□□ -1.24
CCS-205ENST00000530384 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
CCS-205ENST00000530384 M0QZ58 72 aa7.3□□□□□ -1.24
CCS-205ENST00000530384 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
CCS-205ENST00000530384 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
CCS-205ENST00000530384 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
CCS-205ENST00000530384 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
CCS-205ENST00000530384 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
CCS-205ENST00000530384 MT1XP80297 61 aa7.16□□□□□ -1.26
CCS-205ENST00000530384 NEBP20929 6669 aa7.13□□□□□ -1.27
CCS-205ENST00000530384 COX7CP15954 63 aa7.13□□□□□ -1.27
CCS-205ENST00000530384 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
CCS-205ENST00000530384 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
CCS-205ENST00000530384 COA5Q86WW8 74 aa7.06□□□□□ -1.28
CCS-205ENST00000530384 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
CCS-205ENST00000530384 KRTAP12-2P59991 146 aa7□□□□□ -1.29
CCS-205ENST00000530384 H7BZZ5 65 aa6.98□□□□□ -1.29
CCS-205ENST00000530384 SVIPQ8NHG7 77 aa6.96□□□□□ -1.3
CCS-205ENST00000530384 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
CCS-205ENST00000530384 KMT2DO14686 5537 aa6.94□□□□□ -1.3
CCS-205ENST00000530384 SEC61GP60059 68 aa6.93□□□□□ -1.3
CCS-205ENST00000530384 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
CCS-205ENST00000530384 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
CCS-205ENST00000530384 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
CCS-205ENST00000530384 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.3
CCS-205ENST00000530384 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
CCS-205ENST00000530384 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
CCS-205ENST00000530384 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
CCS-205ENST00000530384 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
CCS-205ENST00000530384 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
CCS-205ENST00000530384 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
CCS-205ENST00000530384 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
CCS-205ENST00000530384 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
CCS-205ENST00000530384 A0A1B0GU33 70 aa6.78□□□□□ -1.32
CCS-205ENST00000530384 SPRR2EP22531 72 aa6.75□□□□□ -1.33
CCS-205ENST00000530384 SPRR2BP35325 72 aa6.75□□□□□ -1.33
CCS-205ENST00000530384 SPRR2AP35326 72 aa6.75□□□□□ -1.33
CCS-205ENST00000530384 A0A0D9SG42 100 aa6.74□□□□□ -1.33
CCS-205ENST00000530384 ATP5EP56381 51 aaPredicted RBP6.74□□□□□ -1.33
CCS-205ENST00000530384 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
CCS-205ENST00000530384 A0A1B0GU69 56 aa6.71□□□□□ -1.34
CCS-205ENST00000530384 TMEM258P61165 79 aa6.67□□□□□ -1.34
CCS-205ENST00000530384 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
CCS-205ENST00000530384 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
CCS-205ENST00000530384 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
CCS-205ENST00000530384 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
CCS-205ENST00000530384 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
CCS-205ENST00000530384 RPS28P62857 69 aaKnown RBP6.61□□□□□ -1.35
CCS-205ENST00000530384 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
CCS-205ENST00000530384 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
CCS-205ENST00000530384 SPRR2DP22532 72 aa6.53□□□□□ -1.36
CCS-205ENST00000530384 A8MU10 97 aa6.5□□□□□ -1.37
CCS-205ENST00000530384 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
CCS-205ENST00000530384 KRTAP2-2Q9BYT5 123 aa6.44□□□□□ -1.38
CCS-205ENST00000530384 KRTAP2-1Q9BYU5 128 aa6.44□□□□□ -1.38
CCS-205ENST00000530384 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
CCS-205ENST00000530384 UQCR11O14957 56 aa6.34□□□□□ -1.39
CCS-205ENST00000530384 MT1EP04732 61 aa6.34□□□□□ -1.39
CCS-205ENST00000530384 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
CCS-205ENST00000530384 TNP1P09430 55 aa6.3□□□□□ -1.4
CCS-205ENST00000530384 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
CCS-205ENST00000530384 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
CCS-205ENST00000530384 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
CCS-205ENST00000530384 V9GYY9 64 aa6.28□□□□□ -1.4
CCS-205ENST00000530384 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CCS-205ENST00000530384 Q1T7F1 81 aa6.23□□□□□ -1.41
CCS-205ENST00000530384 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
CCS-205ENST00000530384 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms