RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
COPB1-207ENST00000529866 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
COPB1-207ENST00000529866 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
COPB1-207ENST00000529866 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
COPB1-207ENST00000529866 SPCS1Q9Y6A9 102 aa4.6□□□□□ -1.67
COPB1-207ENST00000529866 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
COPB1-207ENST00000529866 CXCL6P80162 114 aa4.57□□□□□ -1.68
COPB1-207ENST00000529866 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
COPB1-207ENST00000529866 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
COPB1-207ENST00000529866 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
COPB1-207ENST00000529866 LCA10Q71F78 164 aa4.55□□□□□ -1.68
COPB1-207ENST00000529866 S4R3F8 94 aa4.55□□□□□ -1.68
COPB1-207ENST00000529866 C1orf64Q8NEQ6 169 aa4.53□□□□□ -1.68
COPB1-207ENST00000529866 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
COPB1-207ENST00000529866 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
COPB1-207ENST00000529866 K7EP34 96 aa4.51□□□□□ -1.69
COPB1-207ENST00000529866 A0A087WVE0 104 aa4.5□□□□□ -1.69
COPB1-207ENST00000529866 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
COPB1-207ENST00000529866 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
COPB1-207ENST00000529866 SPRR2DP22532 72 aa4.49□□□□□ -1.69
COPB1-207ENST00000529866 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
COPB1-207ENST00000529866 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
COPB1-207ENST00000529866 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
COPB1-207ENST00000529866 COL5A1-AS1Q5SY13 56 aa4.47□□□□□ -1.69
COPB1-207ENST00000529866 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
COPB1-207ENST00000529866 PCP4L1A6NKN8 68 aa4.45□□□□□ -1.7
COPB1-207ENST00000529866 TP53AIP1Q9HCN2 124 aa4.43□□□□□ -1.7
COPB1-207ENST00000529866 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
COPB1-207ENST00000529866 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
COPB1-207ENST00000529866 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
COPB1-207ENST00000529866 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
COPB1-207ENST00000529866 GTF2H5Q6ZYL4 71 aa4.37□□□□□ -1.71
COPB1-207ENST00000529866 F8W1H4 67 aa4.36□□□□□ -1.71
COPB1-207ENST00000529866 MT1XP80297 61 aa4.36□□□□□ -1.71
COPB1-207ENST00000529866 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
COPB1-207ENST00000529866 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
COPB1-207ENST00000529866 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
COPB1-207ENST00000529866 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
COPB1-207ENST00000529866 A8MUN3 132 aa4.32□□□□□ -1.72
COPB1-207ENST00000529866 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
COPB1-207ENST00000529866 H0Y9P7 68 aa4.31□□□□□ -1.72
COPB1-207ENST00000529866 H0YAA0 97 aa4.29□□□□□ -1.72
COPB1-207ENST00000529866 UQCRQO14949 82 aa4.28□□□□□ -1.72
COPB1-207ENST00000529866 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
COPB1-207ENST00000529866 NDUFC1O43677 76 aa4.27□□□□□ -1.73
COPB1-207ENST00000529866 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
COPB1-207ENST00000529866 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
COPB1-207ENST00000529866 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
COPB1-207ENST00000529866 ATP5EP2Q5VTU8 51 aa4.26□□□□□ -1.73
COPB1-207ENST00000529866 A0A1B0GV90 55 aa4.25□□□□□ -1.73
COPB1-207ENST00000529866 ACYP1P07311 99 aa4.25□□□□□ -1.73
COPB1-207ENST00000529866 ATOX1O00244 68 aa4.24□□□□□ -1.73
COPB1-207ENST00000529866 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
COPB1-207ENST00000529866 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
COPB1-207ENST00000529866 P0C880 135 aa4.21□□□□□ -1.74
COPB1-207ENST00000529866 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
COPB1-207ENST00000529866 OCR1Q9BZK8 76 aa4.19□□□□□ -1.74
COPB1-207ENST00000529866 R4GN34 69 aa4.18□□□□□ -1.74
COPB1-207ENST00000529866 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
COPB1-207ENST00000529866 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
COPB1-207ENST00000529866 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
COPB1-207ENST00000529866 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
COPB1-207ENST00000529866 M0QZ58 72 aa4.13□□□□□ -1.75
COPB1-207ENST00000529866 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
COPB1-207ENST00000529866 MP68P56378 58 aa4.12□□□□□ -1.75
COPB1-207ENST00000529866 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
COPB1-207ENST00000529866 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
COPB1-207ENST00000529866 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
COPB1-207ENST00000529866 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
COPB1-207ENST00000529866 H3BPC8 53 aa4.05□□□□□ -1.76
COPB1-207ENST00000529866 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
COPB1-207ENST00000529866 TRAV7A0A075B6U4 112 aa3.98□□□□□ -1.77
COPB1-207ENST00000529866 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
COPB1-207ENST00000529866 PCP4P48539 62 aa3.97□□□□□ -1.77
COPB1-207ENST00000529866 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
COPB1-207ENST00000529866 MT4P47944 62 aa3.95□□□□□ -1.78
COPB1-207ENST00000529866 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
COPB1-207ENST00000529866 MT-ATP8P03928 68 aa3.94□□□□□ -1.78
COPB1-207ENST00000529866 ACYP2P14621 99 aa3.93□□□□□ -1.78
COPB1-207ENST00000529866 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
COPB1-207ENST00000529866 J3QR89 54 aa3.92□□□□□ -1.78
COPB1-207ENST00000529866 K7ERU9 68 aa3.92□□□□□ -1.78
COPB1-207ENST00000529866 CYSTM1Q9H1C7 97 aa3.92□□□□□ -1.78
COPB1-207ENST00000529866 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
COPB1-207ENST00000529866 MT1EP04732 61 aa3.9□□□□□ -1.79
COPB1-207ENST00000529866 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
COPB1-207ENST00000529866 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
COPB1-207ENST00000529866 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
COPB1-207ENST00000529866 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
COPB1-207ENST00000529866 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
COPB1-207ENST00000529866 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
COPB1-207ENST00000529866 MT1GP13640 62 aa3.82□□□□□ -1.8
COPB1-207ENST00000529866 SMIM20Q8N5G0 67 aa3.82□□□□□ -1.8
COPB1-207ENST00000529866 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
COPB1-207ENST00000529866 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
COPB1-207ENST00000529866 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.8
COPB1-207ENST00000529866 MT1MQ8N339 61 aa3.74□□□□□ -1.81
COPB1-207ENST00000529866 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
COPB1-207ENST00000529866 COA5Q86WW8 74 aa3.73□□□□□ -1.81
COPB1-207ENST00000529866 A0A0D9SG42 100 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms