RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
PUF60-213ENST00000528999 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
PUF60-213ENST00000528999 A0A1B0GU33 70 aa5.5□□□□□ -1.53
PUF60-213ENST00000528999 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
PUF60-213ENST00000528999 S4R3F8 94 aa5.45□□□□□ -1.54
PUF60-213ENST00000528999 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
PUF60-213ENST00000528999 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
PUF60-213ENST00000528999 DMBT1Q9UGM3 2413 aaPredicted RBP5.43□□□□□ -1.54
PUF60-213ENST00000528999 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
PUF60-213ENST00000528999 HERC2O95714 4834 aa5.41□□□□□ -1.54
PUF60-213ENST00000528999 H0YAA0 97 aa5.41□□□□□ -1.54
PUF60-213ENST00000528999 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
PUF60-213ENST00000528999 K7ERS5 55 aa5.36□□□□□ -1.55
PUF60-213ENST00000528999 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
PUF60-213ENST00000528999 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
PUF60-213ENST00000528999 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
PUF60-213ENST00000528999 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
PUF60-213ENST00000528999 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
PUF60-213ENST00000528999 J3QL48 77 aa5.31□□□□□ -1.56
PUF60-213ENST00000528999 ABCA13Q86UQ4 5058 aa5.26□□□□□ -1.57
PUF60-213ENST00000528999 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
PUF60-213ENST00000528999 M0QZ58 72 aa5.24□□□□□ -1.57
PUF60-213ENST00000528999 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
PUF60-213ENST00000528999 LRP2P98164 4655 aa5.21□□□□□ -1.58
PUF60-213ENST00000528999 P0C880 135 aa5.21□□□□□ -1.58
PUF60-213ENST00000528999 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
PUF60-213ENST00000528999 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
PUF60-213ENST00000528999 ROMO1P60602 79 aa5.15□□□□□ -1.59
PUF60-213ENST00000528999 A0A0D9SG42 100 aa5.11□□□□□ -1.59
PUF60-213ENST00000528999 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
PUF60-213ENST00000528999 LPAP08519 4548 aa5.11□□□□□ -1.59
PUF60-213ENST00000528999 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
PUF60-213ENST00000528999 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
PUF60-213ENST00000528999 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
PUF60-213ENST00000528999 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
PUF60-213ENST00000528999 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
PUF60-213ENST00000528999 R4GN34 69 aa5.04□□□□□ -1.6
PUF60-213ENST00000528999 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
PUF60-213ENST00000528999 HERC1Q15751 4861 aa5.03□□□□□ -1.6
PUF60-213ENST00000528999 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
PUF60-213ENST00000528999 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
PUF60-213ENST00000528999 HMCN2Q8NDA2 5059 aa4.89□□□□□ -1.63
PUF60-213ENST00000528999 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
PUF60-213ENST00000528999 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
PUF60-213ENST00000528999 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
PUF60-213ENST00000528999 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
PUF60-213ENST00000528999 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
PUF60-213ENST00000528999 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
PUF60-213ENST00000528999 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
PUF60-213ENST00000528999 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
PUF60-213ENST00000528999 MT1HP80294 61 aa4.7□□□□□ -1.66
PUF60-213ENST00000528999 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
PUF60-213ENST00000528999 M0R2T5 61 aa4.68□□□□□ -1.66
PUF60-213ENST00000528999 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
PUF60-213ENST00000528999 MUC2Q02817 5179 aa4.63□□□□□ -1.67
PUF60-213ENST00000528999 TNP1P09430 55 aa4.62□□□□□ -1.67
PUF60-213ENST00000528999 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
PUF60-213ENST00000528999 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
PUF60-213ENST00000528999 MT2AP02795 61 aa4.59□□□□□ -1.67
PUF60-213ENST00000528999 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
PUF60-213ENST00000528999 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
PUF60-213ENST00000528999 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
PUF60-213ENST00000528999 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
PUF60-213ENST00000528999 MT1FP04733 61 aa4.55□□□□□ -1.68
PUF60-213ENST00000528999 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
PUF60-213ENST00000528999 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
PUF60-213ENST00000528999 MT1BP07438 61 aa4.4□□□□□ -1.71
PUF60-213ENST00000528999 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
PUF60-213ENST00000528999 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
PUF60-213ENST00000528999 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
PUF60-213ENST00000528999 MT1XP80297 61 aa4.33□□□□□ -1.72
PUF60-213ENST00000528999 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
PUF60-213ENST00000528999 H3BS24 57 aa4.31□□□□□ -1.72
PUF60-213ENST00000528999 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
PUF60-213ENST00000528999 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
PUF60-213ENST00000528999 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
PUF60-213ENST00000528999 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
PUF60-213ENST00000528999 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
PUF60-213ENST00000528999 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
PUF60-213ENST00000528999 LCE2BO14633 110 aa4.2□□□□□ -1.74
PUF60-213ENST00000528999 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
PUF60-213ENST00000528999 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
PUF60-213ENST00000528999 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
PUF60-213ENST00000528999 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
PUF60-213ENST00000528999 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
PUF60-213ENST00000528999 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
PUF60-213ENST00000528999 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
PUF60-213ENST00000528999 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
PUF60-213ENST00000528999 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
PUF60-213ENST00000528999 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
PUF60-213ENST00000528999 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
PUF60-213ENST00000528999 USH2AO75445 5202 aa3.9□□□□□ -1.78
PUF60-213ENST00000528999 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
PUF60-213ENST00000528999 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
PUF60-213ENST00000528999 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
PUF60-213ENST00000528999 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
PUF60-213ENST00000528999 MT1EP04732 61 aa3.78□□□□□ -1.8
PUF60-213ENST00000528999 MT1LQ93083 61 aa3.75□□□□□ -1.81
PUF60-213ENST00000528999 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
PUF60-213ENST00000528999 INE1O15225 51 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms