RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
AMBRA1-206ENST00000528950 RYR2Q92736 4967 aa4.64□□□□□ -1.67
AMBRA1-206ENST00000528950 RYR3Q15413 4870 aa4.64□□□□□ -1.67
AMBRA1-206ENST00000528950 DNAH11Q96DT5 4516 aa4.63□□□□□ -1.67
AMBRA1-206ENST00000528950 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
AMBRA1-206ENST00000528950 J3QL48 77 aa4.63□□□□□ -1.67
AMBRA1-206ENST00000528950 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
AMBRA1-206ENST00000528950 VPS13BQ7Z7G8 4022 aa4.61□□□□□ -1.67
AMBRA1-206ENST00000528950 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
AMBRA1-206ENST00000528950 DNAH5Q8TE73 4624 aa4.57□□□□□ -1.68
AMBRA1-206ENST00000528950 PKD1P98161 4303 aa4.57□□□□□ -1.68
AMBRA1-206ENST00000528950 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
AMBRA1-206ENST00000528950 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
AMBRA1-206ENST00000528950 SEC61BP60468 96 aaKnown RBP4.53□□□□□ -1.68
AMBRA1-206ENST00000528950 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.69
AMBRA1-206ENST00000528950 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
AMBRA1-206ENST00000528950 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
AMBRA1-206ENST00000528950 Q5VSD8 79 aa4.49□□□□□ -1.69
AMBRA1-206ENST00000528950 M0R2T5 61 aa4.48□□□□□ -1.69
AMBRA1-206ENST00000528950 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
AMBRA1-206ENST00000528950 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
AMBRA1-206ENST00000528950 TNP1P09430 55 aa4.46□□□□□ -1.69
AMBRA1-206ENST00000528950 DYNC1H1Q14204 4646 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-206ENST00000528950 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
AMBRA1-206ENST00000528950 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-206ENST00000528950 KIAA1109Q2LD37 5005 aa4.45□□□□□ -1.7
AMBRA1-206ENST00000528950 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
AMBRA1-206ENST00000528950 TNXBP22105 4242 aa4.42□□□□□ -1.7
AMBRA1-206ENST00000528950 FAT1Q14517 4588 aa4.37□□□□□ -1.71
AMBRA1-206ENST00000528950 XP32Q5T750 250 aa4.36□□□□□ -1.71
AMBRA1-206ENST00000528950 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
AMBRA1-206ENST00000528950 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
AMBRA1-206ENST00000528950 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
AMBRA1-206ENST00000528950 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
AMBRA1-206ENST00000528950 RYR1P21817 5038 aa4.35□□□□□ -1.71
AMBRA1-206ENST00000528950 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.71
AMBRA1-206ENST00000528950 HSPG2P98160 4391 aa4.31□□□□□ -1.72
AMBRA1-206ENST00000528950 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
AMBRA1-206ENST00000528950 HERC2O95714 4834 aa4.28□□□□□ -1.72
AMBRA1-206ENST00000528950 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
AMBRA1-206ENST00000528950 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-206ENST00000528950 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
AMBRA1-206ENST00000528950 LPAP08519 4548 aa4.22□□□□□ -1.73
AMBRA1-206ENST00000528950 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
AMBRA1-206ENST00000528950 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
AMBRA1-206ENST00000528950 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
AMBRA1-206ENST00000528950 HERC1Q15751 4861 aa4.05□□□□□ -1.76
AMBRA1-206ENST00000528950 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-206ENST00000528950 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
AMBRA1-206ENST00000528950 INE1O15225 51 aa3.97□□□□□ -1.77
AMBRA1-206ENST00000528950 LRP2P98164 4655 aa3.97□□□□□ -1.77
AMBRA1-206ENST00000528950 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
AMBRA1-206ENST00000528950 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
AMBRA1-206ENST00000528950 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.79
AMBRA1-206ENST00000528950 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
AMBRA1-206ENST00000528950 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
AMBRA1-206ENST00000528950 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
AMBRA1-206ENST00000528950 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
AMBRA1-206ENST00000528950 MUC2Q02817 5179 aa3.75□□□□□ -1.81
AMBRA1-206ENST00000528950 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
AMBRA1-206ENST00000528950 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
AMBRA1-206ENST00000528950 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
AMBRA1-206ENST00000528950 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
AMBRA1-206ENST00000528950 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
AMBRA1-206ENST00000528950 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.84
AMBRA1-206ENST00000528950 MT1HP80294 61 aa3.5□□□□□ -1.85
AMBRA1-206ENST00000528950 LCE2CQ5TA81 110 aa3.5□□□□□ -1.85
AMBRA1-206ENST00000528950 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
AMBRA1-206ENST00000528950 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.85
AMBRA1-206ENST00000528950 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
AMBRA1-206ENST00000528950 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
AMBRA1-206ENST00000528950 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
AMBRA1-206ENST00000528950 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
AMBRA1-206ENST00000528950 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
AMBRA1-206ENST00000528950 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
AMBRA1-206ENST00000528950 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
AMBRA1-206ENST00000528950 MT2AP02795 61 aa3.31□□□□□ -1.88
AMBRA1-206ENST00000528950 MT1FP04733 61 aa3.31□□□□□ -1.88
AMBRA1-206ENST00000528950 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
AMBRA1-206ENST00000528950 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
AMBRA1-206ENST00000528950 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
AMBRA1-206ENST00000528950 MT1XP80297 61 aa3.24□□□□□ -1.89
AMBRA1-206ENST00000528950 LCE2DQ5TA82 110 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-206ENST00000528950 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
AMBRA1-206ENST00000528950 KMT2DO14686 5537 aa3.2□□□□□ -1.9
AMBRA1-206ENST00000528950 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
AMBRA1-206ENST00000528950 MT1BP07438 61 aa3.18□□□□□ -1.9
AMBRA1-206ENST00000528950 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
AMBRA1-206ENST00000528950 LCE2BO14633 110 aa3.16□□□□□ -1.9
AMBRA1-206ENST00000528950 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
AMBRA1-206ENST00000528950 USH2AO75445 5202 aa3.15□□□□□ -1.9
AMBRA1-206ENST00000528950 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.9
AMBRA1-206ENST00000528950 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
AMBRA1-206ENST00000528950 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
AMBRA1-206ENST00000528950 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.92
AMBRA1-206ENST00000528950 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
AMBRA1-206ENST00000528950 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
AMBRA1-206ENST00000528950 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
AMBRA1-206ENST00000528950 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
AMBRA1-206ENST00000528950 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms