RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
ITGB1-218ENST00000528877 COL5A1-AS1Q5SY13 56 aa3.38□□□□□ -1.87
ITGB1-218ENST00000528877 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
ITGB1-218ENST00000528877 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
ITGB1-218ENST00000528877 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 K7EP34 96 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 NDUFS5O43920 106 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 CXCL6P80162 114 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 H1FX-AS1Q4G0G2 97 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 Q5W150 140 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 CASC2Q6XLA1 102 aa3.36□□□□□ -1.87
ITGB1-218ENST00000528877 Q8N9L7 120 aa3.35□□□□□ -1.87
ITGB1-218ENST00000528877 UBL5Q9BZL1 73 aa3.35□□□□□ -1.87
ITGB1-218ENST00000528877 LINC00846Q9NV44 126 aa3.34□□□□□ -1.87
ITGB1-218ENST00000528877 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
ITGB1-218ENST00000528877 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
ITGB1-218ENST00000528877 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
ITGB1-218ENST00000528877 F8W1H4 67 aa3.3□□□□□ -1.88
ITGB1-218ENST00000528877 GTF2H5Q6ZYL4 71 aa3.3□□□□□ -1.88
ITGB1-218ENST00000528877 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
ITGB1-218ENST00000528877 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
ITGB1-218ENST00000528877 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
ITGB1-218ENST00000528877 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
ITGB1-218ENST00000528877 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
ITGB1-218ENST00000528877 NEBP20929 6669 aa3.26□□□□□ -1.89
ITGB1-218ENST00000528877 ETDBQ3ZM63 59 aa3.26□□□□□ -1.89
ITGB1-218ENST00000528877 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
ITGB1-218ENST00000528877 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
ITGB1-218ENST00000528877 S4R3F8 94 aa3.24□□□□□ -1.89
ITGB1-218ENST00000528877 ACYP1P07311 99 aa3.23□□□□□ -1.89
ITGB1-218ENST00000528877 ATP5EP2Q5VTU8 51 aa3.23□□□□□ -1.89
ITGB1-218ENST00000528877 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
ITGB1-218ENST00000528877 LCA10Q71F78 164 aa3.22□□□□□ -1.89
ITGB1-218ENST00000528877 C1orf64Q8NEQ6 169 aa3.22□□□□□ -1.89
ITGB1-218ENST00000528877 TRAV22A0A0B4J277 110 aa3.21□□□□□ -1.9
ITGB1-218ENST00000528877 LOC101927531A0A1B0GV80 90 aa3.21□□□□□ -1.9
ITGB1-218ENST00000528877 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
ITGB1-218ENST00000528877 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
ITGB1-218ENST00000528877 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
ITGB1-218ENST00000528877 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
ITGB1-218ENST00000528877 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
ITGB1-218ENST00000528877 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
ITGB1-218ENST00000528877 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
ITGB1-218ENST00000528877 ATOX1O00244 68 aa3.17□□□□□ -1.9
ITGB1-218ENST00000528877 MT1BP07438 61 aa3.17□□□□□ -1.9
ITGB1-218ENST00000528877 UQCRQO14949 82 aa3.16□□□□□ -1.9
ITGB1-218ENST00000528877 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
ITGB1-218ENST00000528877 Q5VV11 94 aa3.15□□□□□ -1.91
ITGB1-218ENST00000528877 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
ITGB1-218ENST00000528877 H0YAA0 97 aa3.14□□□□□ -1.91
ITGB1-218ENST00000528877 A0A087WVE0 104 aa3.13□□□□□ -1.91
ITGB1-218ENST00000528877 A8MUN3 132 aa3.13□□□□□ -1.91
ITGB1-218ENST00000528877 H0Y9P7 68 aa3.13□□□□□ -1.91
ITGB1-218ENST00000528877 HIST1H4AP62805 103 aaKnown RBP3.13□□□□□ -1.91
ITGB1-218ENST00000528877 LINC00643Q86TS7 51 aa3.13□□□□□ -1.91
ITGB1-218ENST00000528877 A6NN06 94 aa3.11□□□□□ -1.91
ITGB1-218ENST00000528877 A8MU10 97 aa3.1□□□□□ -1.91
ITGB1-218ENST00000528877 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
ITGB1-218ENST00000528877 IMUPQ9GZP8 106 aa3.1□□□□□ -1.91
ITGB1-218ENST00000528877 NDUFC1O43677 76 aa3.09□□□□□ -1.91
ITGB1-218ENST00000528877 H3BPC8 53 aa3.06□□□□□ -1.92
ITGB1-218ENST00000528877 MP68P56378 58 aa3.06□□□□□ -1.92
ITGB1-218ENST00000528877 LINC00208Q96KT6 92 aa3.06□□□□□ -1.92
ITGB1-218ENST00000528877 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
ITGB1-218ENST00000528877 A0A1B0GV90 55 aa3.05□□□□□ -1.92
ITGB1-218ENST00000528877 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
ITGB1-218ENST00000528877 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
ITGB1-218ENST00000528877 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
ITGB1-218ENST00000528877 J3QR89 54 aa3.03□□□□□ -1.92
ITGB1-218ENST00000528877 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
ITGB1-218ENST00000528877 KMT2DO14686 5537 aa3.02□□□□□ -1.93
ITGB1-218ENST00000528877 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
ITGB1-218ENST00000528877 MDN1Q9NU22 5596 aa3□□□□□ -1.93
ITGB1-218ENST00000528877 KRTAP5-8O75690 187 aa3□□□□□ -1.93
ITGB1-218ENST00000528877 C20orf197Q8N268 126 aa3□□□□□ -1.93
ITGB1-218ENST00000528877 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
ITGB1-218ENST00000528877 MT1XP80297 61 aa2.98□□□□□ -1.93
ITGB1-218ENST00000528877 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
ITGB1-218ENST00000528877 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
ITGB1-218ENST00000528877 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
ITGB1-218ENST00000528877 P0C880 135 aa2.96□□□□□ -1.94
ITGB1-218ENST00000528877 SCGB1A1P11684 91 aa2.96□□□□□ -1.94
ITGB1-218ENST00000528877 R4GN34 69 aa2.96□□□□□ -1.94
ITGB1-218ENST00000528877 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
ITGB1-218ENST00000528877 M0QZ58 72 aa2.93□□□□□ -1.94
ITGB1-218ENST00000528877 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
ITGB1-218ENST00000528877 K7ERU9 68 aa2.91□□□□□ -1.94
ITGB1-218ENST00000528877 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
ITGB1-218ENST00000528877 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
ITGB1-218ENST00000528877 ACYP2P14621 99 aa2.9□□□□□ -1.95
ITGB1-218ENST00000528877 SPTSSBQ8NFR3 76 aa2.89□□□□□ -1.95
ITGB1-218ENST00000528877 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
ITGB1-218ENST00000528877 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
ITGB1-218ENST00000528877 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
ITGB1-218ENST00000528877 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
ITGB1-218ENST00000528877 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
ITGB1-218ENST00000528877 CHKB-CPT1BH3BT56 60 aa2.83□□□□□ -1.96
ITGB1-218ENST00000528877 SPRR2EP22531 72 aa2.83□□□□□ -1.96
ITGB1-218ENST00000528877 SPRR2BP35325 72 aa2.83□□□□□ -1.96
ITGB1-218ENST00000528877 SPRR2AP35326 72 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms