RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 BPY2O14599 106 aa6.76□□□□□ -1.33
CHRDL2-205ENST00000528471 A0A087WVE0 104 aa6.75□□□□□ -1.33
CHRDL2-205ENST00000528471 CXCL6P80162 114 aa6.74□□□□□ -1.33
CHRDL2-205ENST00000528471 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
CHRDL2-205ENST00000528471 LCE2BO14633 110 aa6.72□□□□□ -1.33
CHRDL2-205ENST00000528471 Q1T7F1 81 aa6.72□□□□□ -1.33
CHRDL2-205ENST00000528471 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
CHRDL2-205ENST00000528471 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
CHRDL2-205ENST00000528471 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
CHRDL2-205ENST00000528471 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
CHRDL2-205ENST00000528471 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
CHRDL2-205ENST00000528471 Q8N9L7 120 aa6.68□□□□□ -1.34
CHRDL2-205ENST00000528471 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
CHRDL2-205ENST00000528471 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
CHRDL2-205ENST00000528471 HCG22E2RYF7 251 aa6.65□□□□□ -1.35
CHRDL2-205ENST00000528471 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
CHRDL2-205ENST00000528471 Q5W150 140 aa6.64□□□□□ -1.35
CHRDL2-205ENST00000528471 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
CHRDL2-205ENST00000528471 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
CHRDL2-205ENST00000528471 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
CHRDL2-205ENST00000528471 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
CHRDL2-205ENST00000528471 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
CHRDL2-205ENST00000528471 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
CHRDL2-205ENST00000528471 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
CHRDL2-205ENST00000528471 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
CHRDL2-205ENST00000528471 LCA10Q71F78 164 aa6.47□□□□□ -1.37
CHRDL2-205ENST00000528471 TP53AIP1Q9HCN2 124 aa6.46□□□□□ -1.38
CHRDL2-205ENST00000528471 S4R3F8 94 aa6.45□□□□□ -1.38
CHRDL2-205ENST00000528471 C1orf64Q8NEQ6 169 aa6.44□□□□□ -1.38
CHRDL2-205ENST00000528471 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
CHRDL2-205ENST00000528471 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
CHRDL2-205ENST00000528471 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.39
CHRDL2-205ENST00000528471 A6NN06 94 aa6.39□□□□□ -1.39
CHRDL2-205ENST00000528471 H3BPC8 53 aa6.39□□□□□ -1.39
CHRDL2-205ENST00000528471 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
CHRDL2-205ENST00000528471 Q5VV11 94 aa6.38□□□□□ -1.39
CHRDL2-205ENST00000528471 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
CHRDL2-205ENST00000528471 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
CHRDL2-205ENST00000528471 PSPHP1O15172 72 aa6.35□□□□□ -1.39
CHRDL2-205ENST00000528471 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
CHRDL2-205ENST00000528471 A8MUN3 132 aa6.33□□□□□ -1.4
CHRDL2-205ENST00000528471 MP68P56378 58 aa6.28□□□□□ -1.4
CHRDL2-205ENST00000528471 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
CHRDL2-205ENST00000528471 A6NED7 52 aa6.27□□□□□ -1.41
CHRDL2-205ENST00000528471 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
CHRDL2-205ENST00000528471 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
CHRDL2-205ENST00000528471 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
CHRDL2-205ENST00000528471 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
CHRDL2-205ENST00000528471 H0Y9P7 68 aa6.24□□□□□ -1.41
CHRDL2-205ENST00000528471 MT1BP07438 61 aa6.23□□□□□ -1.41
CHRDL2-205ENST00000528471 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
CHRDL2-205ENST00000528471 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
CHRDL2-205ENST00000528471 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
CHRDL2-205ENST00000528471 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
CHRDL2-205ENST00000528471 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
CHRDL2-205ENST00000528471 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
CHRDL2-205ENST00000528471 COA5Q86WW8 74 aa6.1□□□□□ -1.43
CHRDL2-205ENST00000528471 A8MU10 97 aa6.08□□□□□ -1.44
CHRDL2-205ENST00000528471 H0YAA0 97 aa6.08□□□□□ -1.44
CHRDL2-205ENST00000528471 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
CHRDL2-205ENST00000528471 NEBP20929 6669 aa6.04□□□□□ -1.44
CHRDL2-205ENST00000528471 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
CHRDL2-205ENST00000528471 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
CHRDL2-205ENST00000528471 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
CHRDL2-205ENST00000528471 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
CHRDL2-205ENST00000528471 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
CHRDL2-205ENST00000528471 R4GN34 69 aa5.92□□□□□ -1.46
CHRDL2-205ENST00000528471 KRTAP5-9P26371 169 aa5.9□□□□□ -1.47
CHRDL2-205ENST00000528471 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
CHRDL2-205ENST00000528471 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
CHRDL2-205ENST00000528471 P0C880 135 aa5.87□□□□□ -1.47
CHRDL2-205ENST00000528471 KMT2DO14686 5537 aa5.87□□□□□ -1.47
CHRDL2-205ENST00000528471 M0QZ58 72 aa5.86□□□□□ -1.47
CHRDL2-205ENST00000528471 UQCR11O14957 56 aa5.83□□□□□ -1.48
CHRDL2-205ENST00000528471 MT1XP80297 61 aa5.83□□□□□ -1.48
CHRDL2-205ENST00000528471 MDN1Q9NU22 5596 aa5.83□□□□□ -1.48
CHRDL2-205ENST00000528471 ACYP2P14621 99 aa5.82□□□□□ -1.48
CHRDL2-205ENST00000528471 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
CHRDL2-205ENST00000528471 A0A1B0GU69 56 aa5.79□□□□□ -1.48
CHRDL2-205ENST00000528471 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
CHRDL2-205ENST00000528471 ROMO1P60602 79 aa5.76□□□□□ -1.49
CHRDL2-205ENST00000528471 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
CHRDL2-205ENST00000528471 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
CHRDL2-205ENST00000528471 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
CHRDL2-205ENST00000528471 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
CHRDL2-205ENST00000528471 SPRR2EP22531 72 aa5.69□□□□□ -1.5
CHRDL2-205ENST00000528471 SPRR2BP35325 72 aa5.69□□□□□ -1.5
CHRDL2-205ENST00000528471 SPRR2AP35326 72 aa5.69□□□□□ -1.5
CHRDL2-205ENST00000528471 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
CHRDL2-205ENST00000528471 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
CHRDL2-205ENST00000528471 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
CHRDL2-205ENST00000528471 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
CHRDL2-205ENST00000528471 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
CHRDL2-205ENST00000528471 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
CHRDL2-205ENST00000528471 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
CHRDL2-205ENST00000528471 K7ERS5 55 aa5.51□□□□□ -1.53
CHRDL2-205ENST00000528471 SPRR2DP22532 72 aa5.5□□□□□ -1.53
CHRDL2-205ENST00000528471 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
CHRDL2-205ENST00000528471 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CHRDL2-205ENST00000528471 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms