RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 A8MUN3 132 aa5.21□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 MT-ATP8P03928 68 aa5.18□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 FAM236AA0A1B0GUQ0 79 aa5.17□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 FAM236BA0A1B0GV22 79 aa5.17□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 NDUFC1O43677 76 aa5.16□□□□□ -1.58
TMX2-CTNND1-201ENST00000528395 SMIM20Q8N5G0 67 aa5.15□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 H0YAA0 97 aa5.09□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
TMX2-CTNND1-201ENST00000528395 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
TMX2-CTNND1-201ENST00000528395 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
TMX2-CTNND1-201ENST00000528395 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
TMX2-CTNND1-201ENST00000528395 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
TMX2-CTNND1-201ENST00000528395 Q5VV11 94 aa5.02□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 ACYP2P14621 99 aa5□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 MT1BP07438 61 aa4.99□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
TMX2-CTNND1-201ENST00000528395 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
TMX2-CTNND1-201ENST00000528395 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
TMX2-CTNND1-201ENST00000528395 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
TMX2-CTNND1-201ENST00000528395 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
TMX2-CTNND1-201ENST00000528395 SPTSSBQ8NFR3 76 aa4.93□□□□□ -1.62
TMX2-CTNND1-201ENST00000528395 A6NN06 94 aa4.9□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 P0C880 135 aa4.89□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 PCP4P48539 62 aa4.88□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 R4GN34 69 aa4.88□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 COX7CP15954 63 aa4.85□□□□□ -1.63
TMX2-CTNND1-201ENST00000528395 M0QZ58 72 aa4.83□□□□□ -1.64
TMX2-CTNND1-201ENST00000528395 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
TMX2-CTNND1-201ENST00000528395 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 H7BZZ5 65 aa4.75□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 COA5Q86WW8 74 aa4.75□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
TMX2-CTNND1-201ENST00000528395 MT1XP80297 61 aa4.71□□□□□ -1.66
TMX2-CTNND1-201ENST00000528395 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
TMX2-CTNND1-201ENST00000528395 SEC61GP60059 68 aa4.66□□□□□ -1.66
TMX2-CTNND1-201ENST00000528395 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
TMX2-CTNND1-201ENST00000528395 CCDC179H3BU77 68 aa4.61□□□□□ -1.67
TMX2-CTNND1-201ENST00000528395 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
TMX2-CTNND1-201ENST00000528395 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
TMX2-CTNND1-201ENST00000528395 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
TMX2-CTNND1-201ENST00000528395 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
TMX2-CTNND1-201ENST00000528395 NEBP20929 6669 aa4.56□□□□□ -1.68
TMX2-CTNND1-201ENST00000528395 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
TMX2-CTNND1-201ENST00000528395 A0A1B0GU33 70 aa4.55□□□□□ -1.68
TMX2-CTNND1-201ENST00000528395 KMT2DO14686 5537 aa4.53□□□□□ -1.68
TMX2-CTNND1-201ENST00000528395 A0A1B0GU69 56 aa4.52□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 TMEM258P61165 79 aa4.48□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 A0A0D9SG42 100 aa4.47□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
TMX2-CTNND1-201ENST00000528395 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
TMX2-CTNND1-201ENST00000528395 SPRR2EP22531 72 aa4.37□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 SPRR2BP35325 72 aa4.37□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 SPRR2AP35326 72 aa4.37□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 A8MU10 97 aa4.34□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
TMX2-CTNND1-201ENST00000528395 UQCR11O14957 56 aa4.29□□□□□ -1.72
TMX2-CTNND1-201ENST00000528395 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
TMX2-CTNND1-201ENST00000528395 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
TMX2-CTNND1-201ENST00000528395 V9GYY9 64 aa4.25□□□□□ -1.73
TMX2-CTNND1-201ENST00000528395 SPRR2DP22532 72 aa4.23□□□□□ -1.73
TMX2-CTNND1-201ENST00000528395 Q1T7F1 81 aa4.21□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 TNP1P09430 55 aa4.2□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 MT1EP04732 61 aa4.17□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
TMX2-CTNND1-201ENST00000528395 PSPHP1O15172 72 aa4.15□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 K7ERS5 55 aa4.11□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
TMX2-CTNND1-201ENST00000528395 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms