RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 KRTAP10-1P60331 282 aa3.48□□□□□ -1.85
RDX-203ENST00000527537 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
RDX-203ENST00000527537 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
RDX-203ENST00000527537 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
RDX-203ENST00000527537 KRTAP21-3Q3LHN1 58 aa3.44□□□□□ -1.86
RDX-203ENST00000527537 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
RDX-203ENST00000527537 PKD1P98161 4303 aa3.43□□□□□ -1.86
RDX-203ENST00000527537 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
RDX-203ENST00000527537 FAT2Q9NYQ8 4349 aa3.42□□□□□ -1.86
RDX-203ENST00000527537 KRTAP12-1P59990 96 aa3.4□□□□□ -1.86
RDX-203ENST00000527537 PKHD1P08F94 4074 aa3.4□□□□□ -1.87
RDX-203ENST00000527537 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.87
RDX-203ENST00000527537 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
RDX-203ENST00000527537 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
RDX-203ENST00000527537 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
RDX-203ENST00000527537 FAT1Q14517 4588 aa3.33□□□□□ -1.88
RDX-203ENST00000527537 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
RDX-203ENST00000527537 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
RDX-203ENST00000527537 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
RDX-203ENST00000527537 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
RDX-203ENST00000527537 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
RDX-203ENST00000527537 M0QZ58 72 aa3.25□□□□□ -1.89
RDX-203ENST00000527537 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
RDX-203ENST00000527537 APOBP04114 4563 aaKnown RBP3.24□□□□□ -1.89
RDX-203ENST00000527537 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
RDX-203ENST00000527537 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
RDX-203ENST00000527537 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.89
RDX-203ENST00000527537 A0A1B0GVY2 172 aa3.21□□□□□ -1.9
RDX-203ENST00000527537 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
RDX-203ENST00000527537 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
RDX-203ENST00000527537 LCE2CQ5TA81 110 aa3.19□□□□□ -1.9
RDX-203ENST00000527537 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
RDX-203ENST00000527537 RYR2Q92736 4967 aa3.18□□□□□ -1.9
RDX-203ENST00000527537 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
RDX-203ENST00000527537 J3QL48 77 aa3.16□□□□□ -1.9
RDX-203ENST00000527537 HSPG2P98160 4391 aa3.16□□□□□ -1.9
RDX-203ENST00000527537 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.9
RDX-203ENST00000527537 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
RDX-203ENST00000527537 Q5VSD8 79 aa3.14□□□□□ -1.91
RDX-203ENST00000527537 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
RDX-203ENST00000527537 TNXBP22105 4242 aa3.13□□□□□ -1.91
RDX-203ENST00000527537 R4GN34 69 aa3.1□□□□□ -1.91
RDX-203ENST00000527537 INE1O15225 51 aa3.09□□□□□ -1.91
RDX-203ENST00000527537 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
RDX-203ENST00000527537 RYR3Q15413 4870 aa3.07□□□□□ -1.92
RDX-203ENST00000527537 LPAP08519 4548 aa3.07□□□□□ -1.92
RDX-203ENST00000527537 RYR1P21817 5038 aa3.06□□□□□ -1.92
RDX-203ENST00000527537 KRTAP17-1Q9BYP8 105 aa3.06□□□□□ -1.92
RDX-203ENST00000527537 LRP2P98164 4655 aa3.04□□□□□ -1.92
RDX-203ENST00000527537 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
RDX-203ENST00000527537 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
RDX-203ENST00000527537 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
RDX-203ENST00000527537 KRTAP23-1A1A580 65 aa2.97□□□□□ -1.93
RDX-203ENST00000527537 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
RDX-203ENST00000527537 KRTAP4-5Q9BYR2 181 aa2.92□□□□□ -1.94
RDX-203ENST00000527537 TNP1P09430 55 aa2.92□□□□□ -1.94
RDX-203ENST00000527537 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
RDX-203ENST00000527537 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
RDX-203ENST00000527537 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
RDX-203ENST00000527537 MUC2Q02817 5179 aa2.86□□□□□ -1.95
RDX-203ENST00000527537 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
RDX-203ENST00000527537 MUC17Q685J3 4493 aa2.84□□□□□ -1.96
RDX-203ENST00000527537 HERC2O95714 4834 aa2.81□□□□□ -1.96
RDX-203ENST00000527537 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
RDX-203ENST00000527537 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
RDX-203ENST00000527537 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
RDX-203ENST00000527537 LCE3BQ5TA77 95 aa2.74□□□□□ -1.97
RDX-203ENST00000527537 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
RDX-203ENST00000527537 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
RDX-203ENST00000527537 HERC1Q15751 4861 aa2.72□□□□□ -1.97
RDX-203ENST00000527537 LCE3AQ5TA76 89 aa2.71□□□□□ -1.97
RDX-203ENST00000527537 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
RDX-203ENST00000527537 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
RDX-203ENST00000527537 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
RDX-203ENST00000527537 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
RDX-203ENST00000527537 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
RDX-203ENST00000527537 BIRC6Q9NR09 4857 aa2.67□□□□□ -1.98
RDX-203ENST00000527537 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
RDX-203ENST00000527537 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
RDX-203ENST00000527537 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
RDX-203ENST00000527537 KRTAP4-7Q9BYR0 210 aa2.64□□□□□ -1.99
RDX-203ENST00000527537 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
RDX-203ENST00000527537 M0R2T5 61 aa2.63□□□□□ -1.99
RDX-203ENST00000527537 UBR4Q5T4S7 5183 aa2.6□□□□□ -1.99
RDX-203ENST00000527537 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
RDX-203ENST00000527537 KRTAP12-3P60328 96 aa2.57□□□□□ -2
RDX-203ENST00000527537 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
RDX-203ENST00000527537 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
RDX-203ENST00000527537 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
RDX-203ENST00000527537 MT1HP80294 61 aa2.52□□□□□ -2.01
RDX-203ENST00000527537 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
RDX-203ENST00000527537 MT1FP04733 61 aa2.51□□□□□ -2.01
RDX-203ENST00000527537 MT2AP02795 61 aa2.5□□□□□ -2.01
RDX-203ENST00000527537 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
RDX-203ENST00000527537 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
RDX-203ENST00000527537 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
RDX-203ENST00000527537 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
RDX-203ENST00000527537 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
RDX-203ENST00000527537 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
RDX-203ENST00000527537 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms