RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
CAPN1-207ENST00000527189 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
CAPN1-207ENST00000527189 MT1FP04733 61 aa6.56□□□□□ -1.36
CAPN1-207ENST00000527189 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
CAPN1-207ENST00000527189 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
CAPN1-207ENST00000527189 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
CAPN1-207ENST00000527189 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
CAPN1-207ENST00000527189 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
CAPN1-207ENST00000527189 H7BZZ5 65 aa6.5□□□□□ -1.37
CAPN1-207ENST00000527189 LCE2BO14633 110 aa6.5□□□□□ -1.37
CAPN1-207ENST00000527189 NEBP20929 6669 aa6.49□□□□□ -1.37
CAPN1-207ENST00000527189 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
CAPN1-207ENST00000527189 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
CAPN1-207ENST00000527189 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
CAPN1-207ENST00000527189 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
CAPN1-207ENST00000527189 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
CAPN1-207ENST00000527189 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
CAPN1-207ENST00000527189 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
CAPN1-207ENST00000527189 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
CAPN1-207ENST00000527189 Q5W150 140 aa6.37□□□□□ -1.39
CAPN1-207ENST00000527189 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
CAPN1-207ENST00000527189 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
CAPN1-207ENST00000527189 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
CAPN1-207ENST00000527189 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
CAPN1-207ENST00000527189 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
CAPN1-207ENST00000527189 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
CAPN1-207ENST00000527189 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
CAPN1-207ENST00000527189 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
CAPN1-207ENST00000527189 ACYP2P14621 99 aa6.25□□□□□ -1.41
CAPN1-207ENST00000527189 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
CAPN1-207ENST00000527189 V9GYY9 64 aa6.22□□□□□ -1.41
CAPN1-207ENST00000527189 A8MUN3 132 aa6.21□□□□□ -1.42
CAPN1-207ENST00000527189 COA5Q86WW8 74 aa6.21□□□□□ -1.42
CAPN1-207ENST00000527189 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
CAPN1-207ENST00000527189 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
CAPN1-207ENST00000527189 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
CAPN1-207ENST00000527189 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
CAPN1-207ENST00000527189 S4R3F8 94 aa6.14□□□□□ -1.43
CAPN1-207ENST00000527189 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
CAPN1-207ENST00000527189 LCA10Q71F78 164 aa6.1□□□□□ -1.43
CAPN1-207ENST00000527189 Q1T7F1 81 aa6.07□□□□□ -1.44
CAPN1-207ENST00000527189 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
CAPN1-207ENST00000527189 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CAPN1-207ENST00000527189 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
CAPN1-207ENST00000527189 Q5VV11 94 aa6.03□□□□□ -1.44
CAPN1-207ENST00000527189 KMT2DO14686 5537 aa6.02□□□□□ -1.45
CAPN1-207ENST00000527189 MT1BP07438 61 aa6.01□□□□□ -1.45
CAPN1-207ENST00000527189 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
CAPN1-207ENST00000527189 A6NN06 94 aa6□□□□□ -1.45
CAPN1-207ENST00000527189 SEC61GP60059 68 aa6□□□□□ -1.45
CAPN1-207ENST00000527189 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
CAPN1-207ENST00000527189 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
CAPN1-207ENST00000527189 A0A1B0GU69 56 aa5.95□□□□□ -1.46
CAPN1-207ENST00000527189 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
CAPN1-207ENST00000527189 PSPHP1O15172 72 aa5.94□□□□□ -1.46
CAPN1-207ENST00000527189 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CAPN1-207ENST00000527189 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
CAPN1-207ENST00000527189 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
CAPN1-207ENST00000527189 H0YAA0 97 aa5.89□□□□□ -1.47
CAPN1-207ENST00000527189 A6NED7 52 aa5.87□□□□□ -1.47
CAPN1-207ENST00000527189 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
CAPN1-207ENST00000527189 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
CAPN1-207ENST00000527189 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
CAPN1-207ENST00000527189 UQCR11O14957 56 aa5.79□□□□□ -1.48
CAPN1-207ENST00000527189 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
CAPN1-207ENST00000527189 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
CAPN1-207ENST00000527189 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
CAPN1-207ENST00000527189 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
CAPN1-207ENST00000527189 A0A1B0GU33 70 aa5.68□□□□□ -1.5
CAPN1-207ENST00000527189 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
CAPN1-207ENST00000527189 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
CAPN1-207ENST00000527189 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
CAPN1-207ENST00000527189 R4GN34 69 aa5.65□□□□□ -1.5
CAPN1-207ENST00000527189 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
CAPN1-207ENST00000527189 K7ERS5 55 aa5.62□□□□□ -1.51
CAPN1-207ENST00000527189 MT1XP80297 61 aa5.62□□□□□ -1.51
CAPN1-207ENST00000527189 P0C880 135 aa5.61□□□□□ -1.51
CAPN1-207ENST00000527189 SPRR2EP22531 72 aa5.59□□□□□ -1.51
CAPN1-207ENST00000527189 SPRR2BP35325 72 aa5.59□□□□□ -1.51
CAPN1-207ENST00000527189 SPRR2AP35326 72 aa5.59□□□□□ -1.51
CAPN1-207ENST00000527189 M0QZ58 72 aa5.57□□□□□ -1.52
CAPN1-207ENST00000527189 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
CAPN1-207ENST00000527189 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
CAPN1-207ENST00000527189 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
CAPN1-207ENST00000527189 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
CAPN1-207ENST00000527189 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
CAPN1-207ENST00000527189 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
CAPN1-207ENST00000527189 A8MU10 97 aa5.46□□□□□ -1.54
CAPN1-207ENST00000527189 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
CAPN1-207ENST00000527189 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
CAPN1-207ENST00000527189 A0A0D9SG42 100 aa5.41□□□□□ -1.54
CAPN1-207ENST00000527189 SPRR2DP22532 72 aa5.4□□□□□ -1.54
CAPN1-207ENST00000527189 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
CAPN1-207ENST00000527189 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
CAPN1-207ENST00000527189 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
CAPN1-207ENST00000527189 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CAPN1-207ENST00000527189 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
CAPN1-207ENST00000527189 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
CAPN1-207ENST00000527189 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
CAPN1-207ENST00000527189 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms