RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
CCDC90B-208ENST00000527025 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
CCDC90B-208ENST00000527025 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
CCDC90B-208ENST00000527025 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.71
CCDC90B-208ENST00000527025 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
CCDC90B-208ENST00000527025 PCP4P48539 62 aa4.33□□□□□ -1.72
CCDC90B-208ENST00000527025 UQCRQO14949 82 aa4.32□□□□□ -1.72
CCDC90B-208ENST00000527025 MT1FP04733 61 aa4.32□□□□□ -1.72
CCDC90B-208ENST00000527025 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
CCDC90B-208ENST00000527025 H0Y9P7 68 aa4.29□□□□□ -1.72
CCDC90B-208ENST00000527025 CYP4F30PQ9H0H9 118 aa4.29□□□□□ -1.72
CCDC90B-208ENST00000527025 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
CCDC90B-208ENST00000527025 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
CCDC90B-208ENST00000527025 ATOX1O00244 68 aa4.27□□□□□ -1.73
CCDC90B-208ENST00000527025 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
CCDC90B-208ENST00000527025 USH2AO75445 5202 aa4.26□□□□□ -1.73
CCDC90B-208ENST00000527025 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
CCDC90B-208ENST00000527025 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
CCDC90B-208ENST00000527025 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
CCDC90B-208ENST00000527025 C1orf64Q8NEQ6 169 aa4.24□□□□□ -1.73
CCDC90B-208ENST00000527025 LINC00208Q96KT6 92 aa4.24□□□□□ -1.73
CCDC90B-208ENST00000527025 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
CCDC90B-208ENST00000527025 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
CCDC90B-208ENST00000527025 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
CCDC90B-208ENST00000527025 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
CCDC90B-208ENST00000527025 MP68P56378 58 aa4.22□□□□□ -1.73
CCDC90B-208ENST00000527025 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
CCDC90B-208ENST00000527025 H3BPC8 53 aa4.21□□□□□ -1.74
CCDC90B-208ENST00000527025 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
CCDC90B-208ENST00000527025 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
CCDC90B-208ENST00000527025 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
CCDC90B-208ENST00000527025 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
CCDC90B-208ENST00000527025 LCA10Q71F78 164 aa4.13□□□□□ -1.75
CCDC90B-208ENST00000527025 S4R3F8 94 aa4.13□□□□□ -1.75
CCDC90B-208ENST00000527025 A8MUN3 132 aa4.12□□□□□ -1.75
CCDC90B-208ENST00000527025 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
CCDC90B-208ENST00000527025 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
CCDC90B-208ENST00000527025 DMAC1Q96GE9 116 aa4.1□□□□□ -1.75
CCDC90B-208ENST00000527025 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
CCDC90B-208ENST00000527025 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
CCDC90B-208ENST00000527025 COX7CP15954 63 aa4.08□□□□□ -1.76
CCDC90B-208ENST00000527025 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
CCDC90B-208ENST00000527025 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
CCDC90B-208ENST00000527025 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
CCDC90B-208ENST00000527025 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
CCDC90B-208ENST00000527025 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
CCDC90B-208ENST00000527025 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
CCDC90B-208ENST00000527025 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
CCDC90B-208ENST00000527025 NDUFC1O43677 76 aa4.01□□□□□ -1.77
CCDC90B-208ENST00000527025 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
CCDC90B-208ENST00000527025 H7BZZ5 65 aa4□□□□□ -1.77
CCDC90B-208ENST00000527025 H0YAA0 97 aa3.99□□□□□ -1.77
CCDC90B-208ENST00000527025 MT1BP07438 61 aa3.99□□□□□ -1.77
CCDC90B-208ENST00000527025 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CCDC90B-208ENST00000527025 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
CCDC90B-208ENST00000527025 ACYP2P14621 99 aa3.98□□□□□ -1.77
CCDC90B-208ENST00000527025 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
CCDC90B-208ENST00000527025 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
CCDC90B-208ENST00000527025 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
CCDC90B-208ENST00000527025 COA5Q86WW8 74 aa3.91□□□□□ -1.78
CCDC90B-208ENST00000527025 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
CCDC90B-208ENST00000527025 P0C880 135 aa3.89□□□□□ -1.79
CCDC90B-208ENST00000527025 Q5VV11 94 aa3.89□□□□□ -1.79
CCDC90B-208ENST00000527025 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
CCDC90B-208ENST00000527025 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
CCDC90B-208ENST00000527025 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
CCDC90B-208ENST00000527025 A6NN06 94 aa3.83□□□□□ -1.8
CCDC90B-208ENST00000527025 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
CCDC90B-208ENST00000527025 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CCDC90B-208ENST00000527025 TMEM258P61165 79 aa3.82□□□□□ -1.8
CCDC90B-208ENST00000527025 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
CCDC90B-208ENST00000527025 M0QZ58 72 aa3.78□□□□□ -1.8
CCDC90B-208ENST00000527025 R4GN34 69 aa3.78□□□□□ -1.8
CCDC90B-208ENST00000527025 MT1XP80297 61 aa3.74□□□□□ -1.81
CCDC90B-208ENST00000527025 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
CCDC90B-208ENST00000527025 NEBP20929 6669 aa3.71□□□□□ -1.82
CCDC90B-208ENST00000527025 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
CCDC90B-208ENST00000527025 SERP1Q9Y6X1 66 aa3.69□□□□□ -1.82
CCDC90B-208ENST00000527025 SEC61GP60059 68 aa3.68□□□□□ -1.82
CCDC90B-208ENST00000527025 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
CCDC90B-208ENST00000527025 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
CCDC90B-208ENST00000527025 KMT2DO14686 5537 aa3.66□□□□□ -1.82
CCDC90B-208ENST00000527025 A0A1B0GU69 56 aa3.66□□□□□ -1.82
CCDC90B-208ENST00000527025 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
CCDC90B-208ENST00000527025 A0A1B0GU33 70 aa3.65□□□□□ -1.83
CCDC90B-208ENST00000527025 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
CCDC90B-208ENST00000527025 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
CCDC90B-208ENST00000527025 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CCDC90B-208ENST00000527025 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
CCDC90B-208ENST00000527025 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
CCDC90B-208ENST00000527025 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
CCDC90B-208ENST00000527025 A0A0D9SG42 100 aa3.57□□□□□ -1.84
CCDC90B-208ENST00000527025 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
CCDC90B-208ENST00000527025 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
CCDC90B-208ENST00000527025 Q1T7F1 81 aa3.56□□□□□ -1.84
CCDC90B-208ENST00000527025 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
CCDC90B-208ENST00000527025 A8MU10 97 aa3.55□□□□□ -1.84
CCDC90B-208ENST00000527025 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
CCDC90B-208ENST00000527025 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
CCDC90B-208ENST00000527025 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms