RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
VPS11-202ENST00000526829 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
VPS11-202ENST00000526829 Q5W150 140 aa6.48□□□□□ -1.37
VPS11-202ENST00000526829 A0A1B0GU69 56 aa6.46□□□□□ -1.37
VPS11-202ENST00000526829 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
VPS11-202ENST00000526829 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
VPS11-202ENST00000526829 Q96NJ1 140 aa6.42□□□□□ -1.38
VPS11-202ENST00000526829 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
VPS11-202ENST00000526829 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
VPS11-202ENST00000526829 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.39
VPS11-202ENST00000526829 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
VPS11-202ENST00000526829 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
VPS11-202ENST00000526829 LPAP08519 4548 aa6.37□□□□□ -1.39
VPS11-202ENST00000526829 KRTAP11-1Q8IUC1 163 aa6.37□□□□□ -1.39
VPS11-202ENST00000526829 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
VPS11-202ENST00000526829 ACYP2P14621 99 aa6.35□□□□□ -1.39
VPS11-202ENST00000526829 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
VPS11-202ENST00000526829 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
VPS11-202ENST00000526829 LINC00304Q8N9R0 145 aa6.3□□□□□ -1.4
VPS11-202ENST00000526829 KRTAP1-4P0C5Y4 121 aa6.29□□□□□ -1.4
VPS11-202ENST00000526829 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.4
VPS11-202ENST00000526829 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.4
VPS11-202ENST00000526829 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
VPS11-202ENST00000526829 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
VPS11-202ENST00000526829 MUC2Q02817 5179 aa6.22□□□□□ -1.41
VPS11-202ENST00000526829 SSBP3-AS1Q7Z2R9 100 aa6.17□□□□□ -1.42
VPS11-202ENST00000526829 ANAPC11Q9NYG5 84 aa6.15□□□□□ -1.42
VPS11-202ENST00000526829 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
VPS11-202ENST00000526829 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
VPS11-202ENST00000526829 FAT4Q6V0I7 4981 aa6.11□□□□□ -1.43
VPS11-202ENST00000526829 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
VPS11-202ENST00000526829 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
VPS11-202ENST00000526829 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
VPS11-202ENST00000526829 A0A1B0GU33 70 aa6.06□□□□□ -1.44
VPS11-202ENST00000526829 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
VPS11-202ENST00000526829 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
VPS11-202ENST00000526829 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
VPS11-202ENST00000526829 H0YAA0 97 aa5.98□□□□□ -1.45
VPS11-202ENST00000526829 SPINK1P00995 79 aa5.98□□□□□ -1.45
VPS11-202ENST00000526829 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
VPS11-202ENST00000526829 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
VPS11-202ENST00000526829 KRTAP4-1Q9BYQ7 146 aa5.86□□□□□ -1.47
VPS11-202ENST00000526829 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
VPS11-202ENST00000526829 H1FX-AS1Q4G0G2 97 aa5.82□□□□□ -1.48
VPS11-202ENST00000526829 XP32Q5T750 250 aa5.81□□□□□ -1.48
VPS11-202ENST00000526829 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
VPS11-202ENST00000526829 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
VPS11-202ENST00000526829 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
VPS11-202ENST00000526829 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
VPS11-202ENST00000526829 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
VPS11-202ENST00000526829 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
VPS11-202ENST00000526829 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
VPS11-202ENST00000526829 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
VPS11-202ENST00000526829 MT1HP80294 61 aa5.68□□□□□ -1.5
VPS11-202ENST00000526829 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
VPS11-202ENST00000526829 R4GN34 69 aa5.67□□□□□ -1.5
VPS11-202ENST00000526829 M0R2T5 61 aa5.63□□□□□ -1.51
VPS11-202ENST00000526829 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
VPS11-202ENST00000526829 LORP23490 312 aaPredicted RBP5.62□□□□□ -1.51
VPS11-202ENST00000526829 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
VPS11-202ENST00000526829 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
VPS11-202ENST00000526829 INE1O15225 51 aa5.5□□□□□ -1.53
VPS11-202ENST00000526829 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
VPS11-202ENST00000526829 A0A0D9SG42 100 aa5.44□□□□□ -1.54
VPS11-202ENST00000526829 S4R3F8 94 aa5.4□□□□□ -1.54
VPS11-202ENST00000526829 LCE2BO14633 110 aa5.38□□□□□ -1.55
VPS11-202ENST00000526829 USH2AO75445 5202 aa5.38□□□□□ -1.55
VPS11-202ENST00000526829 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
VPS11-202ENST00000526829 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
VPS11-202ENST00000526829 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
VPS11-202ENST00000526829 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
VPS11-202ENST00000526829 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
VPS11-202ENST00000526829 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
VPS11-202ENST00000526829 MT2AP02795 61 aa5.26□□□□□ -1.57
VPS11-202ENST00000526829 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
VPS11-202ENST00000526829 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
VPS11-202ENST00000526829 M0QZ58 72 aa5.22□□□□□ -1.57
VPS11-202ENST00000526829 MT1FP04733 61 aa5.21□□□□□ -1.58
VPS11-202ENST00000526829 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
VPS11-202ENST00000526829 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
VPS11-202ENST00000526829 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
VPS11-202ENST00000526829 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
VPS11-202ENST00000526829 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
VPS11-202ENST00000526829 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
VPS11-202ENST00000526829 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
VPS11-202ENST00000526829 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
VPS11-202ENST00000526829 NEBP20929 6669 aa4.83□□□□□ -1.64
VPS11-202ENST00000526829 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
VPS11-202ENST00000526829 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
VPS11-202ENST00000526829 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
VPS11-202ENST00000526829 MT1BP07438 61 aa4.74□□□□□ -1.65
VPS11-202ENST00000526829 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
VPS11-202ENST00000526829 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
VPS11-202ENST00000526829 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
VPS11-202ENST00000526829 TNP1P09430 55 aa4.65□□□□□ -1.67
VPS11-202ENST00000526829 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
VPS11-202ENST00000526829 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
VPS11-202ENST00000526829 KMT2DO14686 5537 aa4.61□□□□□ -1.67
VPS11-202ENST00000526829 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
VPS11-202ENST00000526829 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms