RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
HIF3A-210ENST00000526506 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
HIF3A-210ENST00000526506 FAM236AA0A1B0GUQ0 79 aa6.96□□□□□ -1.3
HIF3A-210ENST00000526506 FAM236BA0A1B0GV22 79 aa6.96□□□□□ -1.3
HIF3A-210ENST00000526506 H3BPC8 53 aa6.96□□□□□ -1.3
HIF3A-210ENST00000526506 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
HIF3A-210ENST00000526506 A8MUN3 132 aa6.95□□□□□ -1.3
HIF3A-210ENST00000526506 NDUFC1O43677 76 aa6.9□□□□□ -1.3
HIF3A-210ENST00000526506 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
HIF3A-210ENST00000526506 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
HIF3A-210ENST00000526506 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
HIF3A-210ENST00000526506 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
HIF3A-210ENST00000526506 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
HIF3A-210ENST00000526506 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
HIF3A-210ENST00000526506 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
HIF3A-210ENST00000526506 H0YAA0 97 aa6.79□□□□□ -1.32
HIF3A-210ENST00000526506 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
HIF3A-210ENST00000526506 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
HIF3A-210ENST00000526506 Q5VV11 94 aa6.73□□□□□ -1.33
HIF3A-210ENST00000526506 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
HIF3A-210ENST00000526506 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
HIF3A-210ENST00000526506 MT1BP07438 61 aa6.7□□□□□ -1.34
HIF3A-210ENST00000526506 ACYP2P14621 99 aa6.67□□□□□ -1.34
HIF3A-210ENST00000526506 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
HIF3A-210ENST00000526506 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
HIF3A-210ENST00000526506 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
HIF3A-210ENST00000526506 A6NN06 94 aa6.58□□□□□ -1.36
HIF3A-210ENST00000526506 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
HIF3A-210ENST00000526506 P0C880 135 aa6.57□□□□□ -1.36
HIF3A-210ENST00000526506 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
HIF3A-210ENST00000526506 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
HIF3A-210ENST00000526506 KRTAP6-3Q3LI67 103 aa6.56□□□□□ -1.36
HIF3A-210ENST00000526506 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
HIF3A-210ENST00000526506 R4GN34 69 aa6.54□□□□□ -1.36
HIF3A-210ENST00000526506 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
HIF3A-210ENST00000526506 COX7CP15954 63 aa6.5□□□□□ -1.37
HIF3A-210ENST00000526506 M0QZ58 72 aa6.49□□□□□ -1.37
HIF3A-210ENST00000526506 NEBP20929 6669 aa6.43□□□□□ -1.38
HIF3A-210ENST00000526506 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
HIF3A-210ENST00000526506 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
HIF3A-210ENST00000526506 COA5Q86WW8 74 aa6.38□□□□□ -1.39
HIF3A-210ENST00000526506 H7BZZ5 65 aa6.36□□□□□ -1.39
HIF3A-210ENST00000526506 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
HIF3A-210ENST00000526506 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
HIF3A-210ENST00000526506 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
HIF3A-210ENST00000526506 MT1XP80297 61 aa6.32□□□□□ -1.4
HIF3A-210ENST00000526506 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
HIF3A-210ENST00000526506 KRTAP20-1Q3LI63 56 aa6.29□□□□□ -1.4
HIF3A-210ENST00000526506 SEC61GP60059 68 aa6.23□□□□□ -1.41
HIF3A-210ENST00000526506 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
HIF3A-210ENST00000526506 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
HIF3A-210ENST00000526506 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
HIF3A-210ENST00000526506 KRTAP5-9P26371 169 aa6.15□□□□□ -1.42
HIF3A-210ENST00000526506 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
HIF3A-210ENST00000526506 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
HIF3A-210ENST00000526506 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
HIF3A-210ENST00000526506 KMT2DO14686 5537 aa6.1□□□□□ -1.43
HIF3A-210ENST00000526506 A0A1B0GU33 70 aa6.09□□□□□ -1.43
HIF3A-210ENST00000526506 A0A1B0GU69 56 aa6.06□□□□□ -1.44
HIF3A-210ENST00000526506 A0A0D9SG42 100 aa6.05□□□□□ -1.44
HIF3A-210ENST00000526506 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
HIF3A-210ENST00000526506 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
HIF3A-210ENST00000526506 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
HIF3A-210ENST00000526506 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
HIF3A-210ENST00000526506 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
HIF3A-210ENST00000526506 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
HIF3A-210ENST00000526506 TMEM258P61165 79 aa6.01□□□□□ -1.45
HIF3A-210ENST00000526506 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
HIF3A-210ENST00000526506 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
HIF3A-210ENST00000526506 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
HIF3A-210ENST00000526506 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
HIF3A-210ENST00000526506 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
HIF3A-210ENST00000526506 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
HIF3A-210ENST00000526506 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
HIF3A-210ENST00000526506 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
HIF3A-210ENST00000526506 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
HIF3A-210ENST00000526506 SPRR2EP22531 72 aa5.88□□□□□ -1.47
HIF3A-210ENST00000526506 SPRR2BP35325 72 aa5.88□□□□□ -1.47
HIF3A-210ENST00000526506 SPRR2AP35326 72 aa5.88□□□□□ -1.47
HIF3A-210ENST00000526506 A8MU10 97 aa5.86□□□□□ -1.47
HIF3A-210ENST00000526506 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
HIF3A-210ENST00000526506 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
HIF3A-210ENST00000526506 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
HIF3A-210ENST00000526506 UQCR11O14957 56 aa5.73□□□□□ -1.49
HIF3A-210ENST00000526506 SPRR2DP22532 72 aa5.68□□□□□ -1.5
HIF3A-210ENST00000526506 V9GYY9 64 aa5.66□□□□□ -1.5
HIF3A-210ENST00000526506 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.5
HIF3A-210ENST00000526506 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
HIF3A-210ENST00000526506 TNP1P09430 55 aa5.61□□□□□ -1.51
HIF3A-210ENST00000526506 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
HIF3A-210ENST00000526506 Q1T7F1 81 aa5.61□□□□□ -1.51
HIF3A-210ENST00000526506 MT1EP04732 61 aa5.6□□□□□ -1.51
HIF3A-210ENST00000526506 PSPHP1O15172 72 aa5.59□□□□□ -1.51
HIF3A-210ENST00000526506 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
HIF3A-210ENST00000526506 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
HIF3A-210ENST00000526506 PCP4P48539 62 aa5.53□□□□□ -1.52
HIF3A-210ENST00000526506 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
HIF3A-210ENST00000526506 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
HIF3A-210ENST00000526506 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
HIF3A-210ENST00000526506 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms