RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
TRAPPC4-205ENST00000525079 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
TRAPPC4-205ENST00000525079 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
TRAPPC4-205ENST00000525079 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
TRAPPC4-205ENST00000525079 H0Y9P7 68 aa5.88□□□□□ -1.47
TRAPPC4-205ENST00000525079 UQCRQO14949 82 aa5.88□□□□□ -1.47
TRAPPC4-205ENST00000525079 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
TRAPPC4-205ENST00000525079 ATOX1O00244 68 aa5.82□□□□□ -1.48
TRAPPC4-205ENST00000525079 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
TRAPPC4-205ENST00000525079 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
TRAPPC4-205ENST00000525079 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
TRAPPC4-205ENST00000525079 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
TRAPPC4-205ENST00000525079 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
TRAPPC4-205ENST00000525079 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
TRAPPC4-205ENST00000525079 MT1BP07438 61 aa5.75□□□□□ -1.49
TRAPPC4-205ENST00000525079 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
TRAPPC4-205ENST00000525079 MP68P56378 58 aa5.74□□□□□ -1.49
TRAPPC4-205ENST00000525079 Q5VV11 94 aa5.74□□□□□ -1.49
TRAPPC4-205ENST00000525079 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
TRAPPC4-205ENST00000525079 NDUFC1O43677 76 aa5.73□□□□□ -1.49
TRAPPC4-205ENST00000525079 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
TRAPPC4-205ENST00000525079 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
TRAPPC4-205ENST00000525079 IMUPQ9GZP8 106 aa5.7□□□□□ -1.5
TRAPPC4-205ENST00000525079 A8MUN3 132 aa5.69□□□□□ -1.5
TRAPPC4-205ENST00000525079 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
TRAPPC4-205ENST00000525079 A6NN06 94 aa5.67□□□□□ -1.5
TRAPPC4-205ENST00000525079 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
TRAPPC4-205ENST00000525079 H0YAA0 97 aa5.64□□□□□ -1.51
TRAPPC4-205ENST00000525079 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
TRAPPC4-205ENST00000525079 H3BPC8 53 aa5.63□□□□□ -1.51
TRAPPC4-205ENST00000525079 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
TRAPPC4-205ENST00000525079 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
TRAPPC4-205ENST00000525079 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
TRAPPC4-205ENST00000525079 COX7CP15954 63 aa5.54□□□□□ -1.52
TRAPPC4-205ENST00000525079 TMEM258P61165 79 aa5.54□□□□□ -1.52
TRAPPC4-205ENST00000525079 P0C880 135 aa5.52□□□□□ -1.53
TRAPPC4-205ENST00000525079 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
TRAPPC4-205ENST00000525079 R4GN34 69 aa5.47□□□□□ -1.53
TRAPPC4-205ENST00000525079 M0QZ58 72 aa5.45□□□□□ -1.54
TRAPPC4-205ENST00000525079 ACYP2P14621 99 aa5.45□□□□□ -1.54
TRAPPC4-205ENST00000525079 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
TRAPPC4-205ENST00000525079 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
TRAPPC4-205ENST00000525079 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
TRAPPC4-205ENST00000525079 SERP2Q8N6R1 65 aa5.43□□□□□ -1.54
TRAPPC4-205ENST00000525079 SNURFQ9Y675 71 aa5.43□□□□□ -1.54
TRAPPC4-205ENST00000525079 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
TRAPPC4-205ENST00000525079 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
TRAPPC4-205ENST00000525079 MT1XP80297 61 aa5.39□□□□□ -1.55
TRAPPC4-205ENST00000525079 NEBP20929 6669 aa5.38□□□□□ -1.55
TRAPPC4-205ENST00000525079 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
TRAPPC4-205ENST00000525079 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
TRAPPC4-205ENST00000525079 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
TRAPPC4-205ENST00000525079 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
TRAPPC4-205ENST00000525079 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
TRAPPC4-205ENST00000525079 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
TRAPPC4-205ENST00000525079 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
TRAPPC4-205ENST00000525079 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC4-205ENST00000525079 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
TRAPPC4-205ENST00000525079 V9GYY9 64 aa5.3□□□□□ -1.56
TRAPPC4-205ENST00000525079 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
TRAPPC4-205ENST00000525079 SEC61GP60059 68 aa5.29□□□□□ -1.56
TRAPPC4-205ENST00000525079 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
TRAPPC4-205ENST00000525079 KMT2DO14686 5537 aa5.24□□□□□ -1.57
TRAPPC4-205ENST00000525079 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
TRAPPC4-205ENST00000525079 H7BZZ5 65 aa5.24□□□□□ -1.57
TRAPPC4-205ENST00000525079 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
TRAPPC4-205ENST00000525079 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
TRAPPC4-205ENST00000525079 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
TRAPPC4-205ENST00000525079 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
TRAPPC4-205ENST00000525079 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
TRAPPC4-205ENST00000525079 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
TRAPPC4-205ENST00000525079 COA5Q86WW8 74 aa5.18□□□□□ -1.58
TRAPPC4-205ENST00000525079 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
TRAPPC4-205ENST00000525079 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC4-205ENST00000525079 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
TRAPPC4-205ENST00000525079 SPRR2EP22531 72 aa5.15□□□□□ -1.59
TRAPPC4-205ENST00000525079 SPRR2BP35325 72 aa5.15□□□□□ -1.59
TRAPPC4-205ENST00000525079 SPRR2AP35326 72 aa5.15□□□□□ -1.59
TRAPPC4-205ENST00000525079 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
TRAPPC4-205ENST00000525079 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
TRAPPC4-205ENST00000525079 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
TRAPPC4-205ENST00000525079 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
TRAPPC4-205ENST00000525079 Q1T7F1 81 aa5.07□□□□□ -1.6
TRAPPC4-205ENST00000525079 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
TRAPPC4-205ENST00000525079 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
TRAPPC4-205ENST00000525079 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
TRAPPC4-205ENST00000525079 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
TRAPPC4-205ENST00000525079 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
TRAPPC4-205ENST00000525079 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
TRAPPC4-205ENST00000525079 A0A0D9SG42 100 aa5.04□□□□□ -1.6
TRAPPC4-205ENST00000525079 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
TRAPPC4-205ENST00000525079 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
TRAPPC4-205ENST00000525079 A0A1B0GU33 70 aa4.99□□□□□ -1.61
TRAPPC4-205ENST00000525079 SPRR2DP22532 72 aa4.97□□□□□ -1.61
TRAPPC4-205ENST00000525079 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
TRAPPC4-205ENST00000525079 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
TRAPPC4-205ENST00000525079 A0A1B0GU69 56 aa4.91□□□□□ -1.62
TRAPPC4-205ENST00000525079 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
TRAPPC4-205ENST00000525079 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
TRAPPC4-205ENST00000525079 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms