RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
SHPRH-210ENST00000523276 ACYP2P14621 99 aa3.67□□□□□ -1.82
SHPRH-210ENST00000523276 Q5VV11 94 aa3.67□□□□□ -1.82
SHPRH-210ENST00000523276 IGKV2D-30A0A075B6S6 120 aa3.66□□□□□ -1.82
SHPRH-210ENST00000523276 RYR3Q15413 4870 aa3.66□□□□□ -1.82
SHPRH-210ENST00000523276 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
SHPRH-210ENST00000523276 HSPG2P98160 4391 aa3.66□□□□□ -1.82
SHPRH-210ENST00000523276 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.82
SHPRH-210ENST00000523276 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
SHPRH-210ENST00000523276 RYR1P21817 5038 aa3.64□□□□□ -1.83
SHPRH-210ENST00000523276 C9orf92A6NGG3 77 aa3.64□□□□□ -1.83
SHPRH-210ENST00000523276 A8MUU9 505 aa3.64□□□□□ -1.83
SHPRH-210ENST00000523276 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
SHPRH-210ENST00000523276 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
SHPRH-210ENST00000523276 TNXBP22105 4242 aa3.63□□□□□ -1.83
SHPRH-210ENST00000523276 Q5VSD8 79 aa3.63□□□□□ -1.83
SHPRH-210ENST00000523276 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
SHPRH-210ENST00000523276 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
SHPRH-210ENST00000523276 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
SHPRH-210ENST00000523276 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
SHPRH-210ENST00000523276 A6NED7 52 aa3.57□□□□□ -1.84
SHPRH-210ENST00000523276 A8MU10 97 aa3.56□□□□□ -1.84
SHPRH-210ENST00000523276 FLG2Q5D862 2391 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-210ENST00000523276 LCA10Q71F78 164 aa3.55□□□□□ -1.84
SHPRH-210ENST00000523276 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
SHPRH-210ENST00000523276 SPINK7P58062 85 aa3.54□□□□□ -1.84
SHPRH-210ENST00000523276 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
SHPRH-210ENST00000523276 A0A1B0GU69 56 aa3.53□□□□□ -1.84
SHPRH-210ENST00000523276 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
SHPRH-210ENST00000523276 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
SHPRH-210ENST00000523276 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
SHPRH-210ENST00000523276 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
SHPRH-210ENST00000523276 ATP11AUNQ6ZP68 121 aa3.51□□□□□ -1.85
SHPRH-210ENST00000523276 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
SHPRH-210ENST00000523276 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
SHPRH-210ENST00000523276 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
SHPRH-210ENST00000523276 UQCR11O14957 56 aa3.46□□□□□ -1.86
SHPRH-210ENST00000523276 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
SHPRH-210ENST00000523276 A6NN06 94 aa3.44□□□□□ -1.86
SHPRH-210ENST00000523276 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
SHPRH-210ENST00000523276 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
SHPRH-210ENST00000523276 TPRXLQ17RH7 258 aa3.43□□□□□ -1.86
SHPRH-210ENST00000523276 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-210ENST00000523276 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
SHPRH-210ENST00000523276 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
SHPRH-210ENST00000523276 S4R3F8 94 aa3.37□□□□□ -1.87
SHPRH-210ENST00000523276 A0A1B0GU33 70 aa3.37□□□□□ -1.87
SHPRH-210ENST00000523276 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
SHPRH-210ENST00000523276 LRP2P98164 4655 aa3.37□□□□□ -1.87
SHPRH-210ENST00000523276 H0YAA0 97 aa3.36□□□□□ -1.87
SHPRH-210ENST00000523276 LPAP08519 4548 aa3.35□□□□□ -1.87
SHPRH-210ENST00000523276 HERC2O95714 4834 aa3.35□□□□□ -1.87
SHPRH-210ENST00000523276 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
SHPRH-210ENST00000523276 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
SHPRH-210ENST00000523276 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
SHPRH-210ENST00000523276 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
SHPRH-210ENST00000523276 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
SHPRH-210ENST00000523276 P0C880 135 aa3.26□□□□□ -1.89
SHPRH-210ENST00000523276 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
SHPRH-210ENST00000523276 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
SHPRH-210ENST00000523276 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
SHPRH-210ENST00000523276 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
SHPRH-210ENST00000523276 K7ERS5 55 aa3.24□□□□□ -1.89
SHPRH-210ENST00000523276 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
SHPRH-210ENST00000523276 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SHPRH-210ENST00000523276 A0A0D9SG42 100 aa3.2□□□□□ -1.9
SHPRH-210ENST00000523276 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
SHPRH-210ENST00000523276 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
SHPRH-210ENST00000523276 M0QZ58 72 aa3.17□□□□□ -1.9
SHPRH-210ENST00000523276 HERC1Q15751 4861 aa3.16□□□□□ -1.9
SHPRH-210ENST00000523276 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
SHPRH-210ENST00000523276 ROMO1P60602 79 aa3.15□□□□□ -1.91
SHPRH-210ENST00000523276 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
SHPRH-210ENST00000523276 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SHPRH-210ENST00000523276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SHPRH-210ENST00000523276 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
SHPRH-210ENST00000523276 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
SHPRH-210ENST00000523276 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-210ENST00000523276 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
SHPRH-210ENST00000523276 R4GN34 69 aa3.1□□□□□ -1.91
SHPRH-210ENST00000523276 MUC2Q02817 5179 aa3.09□□□□□ -1.92
SHPRH-210ENST00000523276 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
SHPRH-210ENST00000523276 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
SHPRH-210ENST00000523276 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
SHPRH-210ENST00000523276 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
SHPRH-210ENST00000523276 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
SHPRH-210ENST00000523276 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.94
SHPRH-210ENST00000523276 FAT4Q6V0I7 4981 aa2.96□□□□□ -1.94
SHPRH-210ENST00000523276 MT1HP80294 61 aa2.95□□□□□ -1.94
SHPRH-210ENST00000523276 M0R2T5 61 aa2.92□□□□□ -1.94
SHPRH-210ENST00000523276 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
SHPRH-210ENST00000523276 MT2AP02795 61 aa2.88□□□□□ -1.95
SHPRH-210ENST00000523276 MT1FP04733 61 aa2.87□□□□□ -1.95
SHPRH-210ENST00000523276 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
SHPRH-210ENST00000523276 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
SHPRH-210ENST00000523276 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
SHPRH-210ENST00000523276 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
SHPRH-210ENST00000523276 TNP1P09430 55 aa2.82□□□□□ -1.96
SHPRH-210ENST00000523276 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
SHPRH-210ENST00000523276 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms