RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
CSMD1-211ENST00000523062 RETNLBQ9BQ08 111 aa3.78□□□□□ -1.8
CSMD1-211ENST00000523062 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
CSMD1-211ENST00000523062 OXTP01178 125 aa3.76□□□□□ -1.81
CSMD1-211ENST00000523062 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 C9orf92A6NGG3 77 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 A8MUU9 505 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 PRR4Q16378 134 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
CSMD1-211ENST00000523062 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
CSMD1-211ENST00000523062 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
CSMD1-211ENST00000523062 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
CSMD1-211ENST00000523062 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
CSMD1-211ENST00000523062 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CSMD1-211ENST00000523062 MT3P25713 68 aa3.72□□□□□ -1.81
CSMD1-211ENST00000523062 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
CSMD1-211ENST00000523062 TNXBP22105 4242 aa3.71□□□□□ -1.81
CSMD1-211ENST00000523062 Q75L30 129 aa3.71□□□□□ -1.82
CSMD1-211ENST00000523062 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
CSMD1-211ENST00000523062 DMBT1Q9UGM3 2413 aaPredicted RBP3.7□□□□□ -1.82
CSMD1-211ENST00000523062 HRES1P13985 223 aa3.7□□□□□ -1.82
CSMD1-211ENST00000523062 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
CSMD1-211ENST00000523062 COA5Q86WW8 74 aa3.69□□□□□ -1.82
CSMD1-211ENST00000523062 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
CSMD1-211ENST00000523062 ACYP2P14621 99 aa3.66□□□□□ -1.82
CSMD1-211ENST00000523062 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
CSMD1-211ENST00000523062 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
CSMD1-211ENST00000523062 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.83
CSMD1-211ENST00000523062 HERC1Q15751 4861 aa3.65□□□□□ -1.83
CSMD1-211ENST00000523062 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
CSMD1-211ENST00000523062 V9GYY9 64 aa3.64□□□□□ -1.83
CSMD1-211ENST00000523062 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
CSMD1-211ENST00000523062 A8MUN3 132 aa3.63□□□□□ -1.83
CSMD1-211ENST00000523062 SPINK7P58062 85 aa3.63□□□□□ -1.83
CSMD1-211ENST00000523062 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
CSMD1-211ENST00000523062 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
CSMD1-211ENST00000523062 Q1T7F1 81 aa3.62□□□□□ -1.83
CSMD1-211ENST00000523062 C4orf26Q17RF5 130 aa3.61□□□□□ -1.83
CSMD1-211ENST00000523062 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
CSMD1-211ENST00000523062 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
CSMD1-211ENST00000523062 COX6B2Q6YFQ2 88 aa3.56□□□□□ -1.84
CSMD1-211ENST00000523062 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CSMD1-211ENST00000523062 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
CSMD1-211ENST00000523062 SPTSSBQ8NFR3 76 aa3.54□□□□□ -1.84
CSMD1-211ENST00000523062 SEC61BP60468 96 aaKnown RBP3.52□□□□□ -1.85
CSMD1-211ENST00000523062 Q5VV11 94 aa3.52□□□□□ -1.85
CSMD1-211ENST00000523062 A0A1B0GU69 56 aa3.49□□□□□ -1.85
CSMD1-211ENST00000523062 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
CSMD1-211ENST00000523062 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
CSMD1-211ENST00000523062 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
CSMD1-211ENST00000523062 S4R3F8 94 aa3.46□□□□□ -1.86
CSMD1-211ENST00000523062 A6NED7 52 aa3.45□□□□□ -1.86
CSMD1-211ENST00000523062 SEC61GP60059 68 aa3.45□□□□□ -1.86
CSMD1-211ENST00000523062 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
CSMD1-211ENST00000523062 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
CSMD1-211ENST00000523062 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
CSMD1-211ENST00000523062 LCA10Q71F78 164 aa3.43□□□□□ -1.86
CSMD1-211ENST00000523062 LRP2P98164 4655 aa3.43□□□□□ -1.86
CSMD1-211ENST00000523062 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
CSMD1-211ENST00000523062 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
CSMD1-211ENST00000523062 LPAP08519 4548 aa3.39□□□□□ -1.87
CSMD1-211ENST00000523062 UQCR11O14957 56 aa3.39□□□□□ -1.87
CSMD1-211ENST00000523062 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
CSMD1-211ENST00000523062 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
CSMD1-211ENST00000523062 CSAG1Q6PB30 78 aa3.36□□□□□ -1.87
CSMD1-211ENST00000523062 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
CSMD1-211ENST00000523062 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
CSMD1-211ENST00000523062 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
CSMD1-211ENST00000523062 A0A1B0GU33 70 aa3.35□□□□□ -1.87
CSMD1-211ENST00000523062 A8MU10 97 aa3.35□□□□□ -1.87
CSMD1-211ENST00000523062 SVIPQ8NHG7 77 aa3.33□□□□□ -1.88
CSMD1-211ENST00000523062 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
CSMD1-211ENST00000523062 H0YAA0 97 aa3.3□□□□□ -1.88
CSMD1-211ENST00000523062 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
CSMD1-211ENST00000523062 P0C880 135 aa3.28□□□□□ -1.88
CSMD1-211ENST00000523062 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
CSMD1-211ENST00000523062 A6NN06 94 aa3.25□□□□□ -1.89
CSMD1-211ENST00000523062 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CSMD1-211ENST00000523062 M0QZ58 72 aa3.23□□□□□ -1.89
CSMD1-211ENST00000523062 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
CSMD1-211ENST00000523062 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
CSMD1-211ENST00000523062 K7ERS5 55 aa3.22□□□□□ -1.89
CSMD1-211ENST00000523062 A0A0D9SG42 100 aa3.2□□□□□ -1.9
CSMD1-211ENST00000523062 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
CSMD1-211ENST00000523062 R4GN34 69 aa3.18□□□□□ -1.9
CSMD1-211ENST00000523062 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
CSMD1-211ENST00000523062 MUC2Q02817 5179 aa3.16□□□□□ -1.9
CSMD1-211ENST00000523062 MT1HP80294 61 aa3.15□□□□□ -1.91
CSMD1-211ENST00000523062 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
CSMD1-211ENST00000523062 M0R2T5 61 aa3.14□□□□□ -1.91
CSMD1-211ENST00000523062 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
CSMD1-211ENST00000523062 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
CSMD1-211ENST00000523062 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
CSMD1-211ENST00000523062 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
CSMD1-211ENST00000523062 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
CSMD1-211ENST00000523062 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
CSMD1-211ENST00000523062 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
CSMD1-211ENST00000523062 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms