RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 A0A1B0GU69 56 aa8.53□□□□□ -1.04
SREK1-212ENST00000522912 A8MU10 97 aa8.52□□□□□ -1.05
SREK1-212ENST00000522912 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
SREK1-212ENST00000522912 LCA10Q71F78 164 aa8.47□□□□□ -1.05
SREK1-212ENST00000522912 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
SREK1-212ENST00000522912 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.05
SREK1-212ENST00000522912 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
SREK1-212ENST00000522912 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
SREK1-212ENST00000522912 S4R3F8 94 aa8.44□□□□□ -1.06
SREK1-212ENST00000522912 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
SREK1-212ENST00000522912 MUC17Q685J3 4493 aa8.43□□□□□ -1.06
SREK1-212ENST00000522912 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
SREK1-212ENST00000522912 HERC1Q15751 4861 aa8.4□□□□□ -1.07
SREK1-212ENST00000522912 SEC61GP60059 68 aa8.39□□□□□ -1.07
SREK1-212ENST00000522912 UQCR11O14957 56 aa8.3□□□□□ -1.08
SREK1-212ENST00000522912 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
SREK1-212ENST00000522912 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
SREK1-212ENST00000522912 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
SREK1-212ENST00000522912 PMAIP1Q13794 54 aa8.25□□□□□ -1.09
SREK1-212ENST00000522912 KRTAP19-2Q3LHN2 52 aa8.24□□□□□ -1.09
SREK1-212ENST00000522912 A0A1B0GU33 70 aa8.22□□□□□ -1.09
SREK1-212ENST00000522912 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
SREK1-212ENST00000522912 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
SREK1-212ENST00000522912 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
SREK1-212ENST00000522912 H0YAA0 97 aa8.17□□□□□ -1.1
SREK1-212ENST00000522912 A6NN06 94 aa8.14□□□□□ -1.11
SREK1-212ENST00000522912 P0C880 135 aa8.13□□□□□ -1.11
SREK1-212ENST00000522912 MUC2Q02817 5179 aa8.12□□□□□ -1.11
SREK1-212ENST00000522912 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
SREK1-212ENST00000522912 KRTAP13-4Q3LI77 160 aa8.05□□□□□ -1.12
SREK1-212ENST00000522912 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
SREK1-212ENST00000522912 KTN1-AS1Q86SY8 53 aa7.98□□□□□ -1.13
SREK1-212ENST00000522912 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
SREK1-212ENST00000522912 A0A0D9SG42 100 aa7.9□□□□□ -1.15
SREK1-212ENST00000522912 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.15
SREK1-212ENST00000522912 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
SREK1-212ENST00000522912 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
SREK1-212ENST00000522912 M0QZ58 72 aa7.86□□□□□ -1.15
SREK1-212ENST00000522912 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
SREK1-212ENST00000522912 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
SREK1-212ENST00000522912 K7ERS5 55 aa7.78□□□□□ -1.16
SREK1-212ENST00000522912 R4GN34 69 aa7.77□□□□□ -1.17
SREK1-212ENST00000522912 MT1HP80294 61 aa7.75□□□□□ -1.17
SREK1-212ENST00000522912 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
SREK1-212ENST00000522912 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
SREK1-212ENST00000522912 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
SREK1-212ENST00000522912 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
SREK1-212ENST00000522912 M0R2T5 61 aa7.67□□□□□ -1.18
SREK1-212ENST00000522912 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
SREK1-212ENST00000522912 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
SREK1-212ENST00000522912 ROMO1P60602 79 aa7.54□□□□□ -1.2
SREK1-212ENST00000522912 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
SREK1-212ENST00000522912 MT2AP02795 61 aa7.51□□□□□ -1.21
SREK1-212ENST00000522912 MT1FP04733 61 aa7.48□□□□□ -1.21
SREK1-212ENST00000522912 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
SREK1-212ENST00000522912 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
SREK1-212ENST00000522912 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SREK1-212ENST00000522912 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SREK1-212ENST00000522912 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
SREK1-212ENST00000522912 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
SREK1-212ENST00000522912 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
SREK1-212ENST00000522912 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
SREK1-212ENST00000522912 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
SREK1-212ENST00000522912 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
SREK1-212ENST00000522912 MT1BP07438 61 aa7.13□□□□□ -1.27
SREK1-212ENST00000522912 LCE2BO14633 110 aa7.01□□□□□ -1.29
SREK1-212ENST00000522912 TNP1P09430 55 aa6.98□□□□□ -1.29
SREK1-212ENST00000522912 MT1XP80297 61 aa6.94□□□□□ -1.3
SREK1-212ENST00000522912 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
SREK1-212ENST00000522912 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
SREK1-212ENST00000522912 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SREK1-212ENST00000522912 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
SREK1-212ENST00000522912 USH2AO75445 5202 aa6.72□□□□□ -1.33
SREK1-212ENST00000522912 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
SREK1-212ENST00000522912 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
SREK1-212ENST00000522912 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
SREK1-212ENST00000522912 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
SREK1-212ENST00000522912 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
SREK1-212ENST00000522912 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
SREK1-212ENST00000522912 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
SREK1-212ENST00000522912 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
SREK1-212ENST00000522912 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.39
SREK1-212ENST00000522912 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.39
SREK1-212ENST00000522912 KMT2DO14686 5537 aa6.34□□□□□ -1.39
SREK1-212ENST00000522912 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
SREK1-212ENST00000522912 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
SREK1-212ENST00000522912 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
SREK1-212ENST00000522912 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
SREK1-212ENST00000522912 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
SREK1-212ENST00000522912 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
SREK1-212ENST00000522912 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
SREK1-212ENST00000522912 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
SREK1-212ENST00000522912 H3BS24 57 aa6.11□□□□□ -1.43
SREK1-212ENST00000522912 MT1EP04732 61 aa6.06□□□□□ -1.44
SREK1-212ENST00000522912 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
SREK1-212ENST00000522912 A0A0A0MQY5 61 aa6□□□□□ -1.45
SREK1-212ENST00000522912 MT1LQ93083 61 aa5.98□□□□□ -1.45
SREK1-212ENST00000522912 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.45
SREK1-212ENST00000522912 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
SREK1-212ENST00000522912 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms