RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 LCA10Q71F78 164 aa10.29□□□□□ -0.76
HOXA3-205ENST00000522456 KRTAP19-6Q3LI70 58 aa10.28□□□□□ -0.76
HOXA3-205ENST00000522456 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
HOXA3-205ENST00000522456 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
HOXA3-205ENST00000522456 MT-ATP8P03928 68 aa10.22□□□□□ -0.77
HOXA3-205ENST00000522456 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
HOXA3-205ENST00000522456 H3BPC8 53 aa10.16□□□□□ -0.78
HOXA3-205ENST00000522456 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
HOXA3-205ENST00000522456 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
HOXA3-205ENST00000522456 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
HOXA3-205ENST00000522456 A8MUN3 132 aa10.11□□□□□ -0.79
HOXA3-205ENST00000522456 NDUFC1O43677 76 aa10.05□□□□□ -0.8
HOXA3-205ENST00000522456 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
HOXA3-205ENST00000522456 KRTAP6-3Q3LI67 103 aa10.03□□□□□ -0.8
HOXA3-205ENST00000522456 TRAV7A0A075B6U4 112 aa10.01□□□□□ -0.81
HOXA3-205ENST00000522456 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
HOXA3-205ENST00000522456 H0YAA0 97 aa9.84□□□□□ -0.83
HOXA3-205ENST00000522456 SPRR2GQ9BYE4 73 aa9.84□□□□□ -0.83
HOXA3-205ENST00000522456 NEBP20929 6669 aa9.81□□□□□ -0.84
HOXA3-205ENST00000522456 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
HOXA3-205ENST00000522456 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
HOXA3-205ENST00000522456 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
HOXA3-205ENST00000522456 SERP2Q8N6R1 65 aa9.77□□□□□ -0.85
HOXA3-205ENST00000522456 ACYP2P14621 99 aa9.76□□□□□ -0.85
HOXA3-205ENST00000522456 Q5VV11 94 aa9.75□□□□□ -0.85
HOXA3-205ENST00000522456 KRTAP19-8Q3LI54 63 aa9.73□□□□□ -0.85
HOXA3-205ENST00000522456 C20orf197Q8N268 126 aa9.73□□□□□ -0.85
HOXA3-205ENST00000522456 MUC12Q9UKN1 5478 aa9.7□□□□□ -0.86
HOXA3-205ENST00000522456 MT1BP07438 61 aa9.7□□□□□ -0.86
HOXA3-205ENST00000522456 A6NN06 94 aa9.68□□□□□ -0.86
HOXA3-205ENST00000522456 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
HOXA3-205ENST00000522456 SPANXA2-OT1Q8N9U9 137 aa9.6□□□□□ -0.87
HOXA3-205ENST00000522456 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
HOXA3-205ENST00000522456 P0C880 135 aa9.58□□□□□ -0.88
HOXA3-205ENST00000522456 COX7CP15954 63 aa9.54□□□□□ -0.88
HOXA3-205ENST00000522456 R4GN34 69 aa9.53□□□□□ -0.88
HOXA3-205ENST00000522456 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
HOXA3-205ENST00000522456 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
HOXA3-205ENST00000522456 KRTAP20-1Q3LI63 56 aa9.48□□□□□ -0.89
HOXA3-205ENST00000522456 M0QZ58 72 aa9.46□□□□□ -0.9
HOXA3-205ENST00000522456 KRTAP5-9P26371 169 aa9.41□□□□□ -0.9
HOXA3-205ENST00000522456 MDN1Q9NU22 5596 aa9.38□□□□□ -0.91
HOXA3-205ENST00000522456 KMT2DO14686 5537 aa9.37□□□□□ -0.91
HOXA3-205ENST00000522456 PLAC4Q8WY50 150 aa9.36□□□□□ -0.91
HOXA3-205ENST00000522456 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
HOXA3-205ENST00000522456 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
HOXA3-205ENST00000522456 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
HOXA3-205ENST00000522456 COA5Q86WW8 74 aa9.33□□□□□ -0.92
HOXA3-205ENST00000522456 H7BZZ5 65 aa9.32□□□□□ -0.92
HOXA3-205ENST00000522456 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
HOXA3-205ENST00000522456 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
HOXA3-205ENST00000522456 MT1XP80297 61 aa9.16□□□□□ -0.94
HOXA3-205ENST00000522456 SEC61GP60059 68 aa9.12□□□□□ -0.95
HOXA3-205ENST00000522456 KRTAP2-3P0C7H8 128 aa9.11□□□□□ -0.95
HOXA3-205ENST00000522456 KRTAP2-4Q9BYR9 128 aa9.11□□□□□ -0.95
HOXA3-205ENST00000522456 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
HOXA3-205ENST00000522456 SPRR2FQ96RM1 72 aa9.05□□□□□ -0.96
HOXA3-205ENST00000522456 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
HOXA3-205ENST00000522456 SPRR2EP22531 72 aa9.01□□□□□ -0.97
HOXA3-205ENST00000522456 SPRR2BP35325 72 aa9.01□□□□□ -0.97
HOXA3-205ENST00000522456 SPRR2AP35326 72 aa9.01□□□□□ -0.97
HOXA3-205ENST00000522456 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
HOXA3-205ENST00000522456 A0A1B0GU33 70 aa8.92□□□□□ -0.98
HOXA3-205ENST00000522456 KRTAP12-2P59991 146 aa8.92□□□□□ -0.98
HOXA3-205ENST00000522456 KRTAP8-1Q8IUC2 63 aa8.89□□□□□ -0.99
HOXA3-205ENST00000522456 A0A1B0GU69 56 aa8.88□□□□□ -0.99
HOXA3-205ENST00000522456 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
HOXA3-205ENST00000522456 A0A0D9SG42 100 aa8.84□□□□□ -0.99
HOXA3-205ENST00000522456 LCE1AQ5T7P2 110 aa8.83□□□□□ -1
HOXA3-205ENST00000522456 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
HOXA3-205ENST00000522456 TMEM258P61165 79 aa8.81□□□□□ -1
HOXA3-205ENST00000522456 KRTAP2-2Q9BYT5 123 aa8.8□□□□□ -1
HOXA3-205ENST00000522456 KRTAP2-1Q9BYU5 128 aa8.8□□□□□ -1
HOXA3-205ENST00000522456 KRTAP10-7P60409 375 aaPredicted RBP8.76□□□□□ -1.01
HOXA3-205ENST00000522456 PCP4P48539 62 aa8.73□□□□□ -1.01
HOXA3-205ENST00000522456 SPRR2DP22532 72 aa8.72□□□□□ -1.01
HOXA3-205ENST00000522456 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
HOXA3-205ENST00000522456 KRTAP4-8A0A0G2JLE6 195 aa8.7□□□□□ -1.02
HOXA3-205ENST00000522456 KRTAP10-12P60413 245 aa8.7□□□□□ -1.02
HOXA3-205ENST00000522456 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
HOXA3-205ENST00000522456 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
HOXA3-205ENST00000522456 SMIM26A0A096LP01 95 aa8.66□□□□□ -1.02
HOXA3-205ENST00000522456 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
HOXA3-205ENST00000522456 KRTAP12-1P59990 96 aa8.63□□□□□ -1.03
HOXA3-205ENST00000522456 A8MU10 97 aa8.59□□□□□ -1.03
HOXA3-205ENST00000522456 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
HOXA3-205ENST00000522456 UQCR11O14957 56 aa8.4□□□□□ -1.06
HOXA3-205ENST00000522456 V9GYY9 64 aa8.31□□□□□ -1.08
HOXA3-205ENST00000522456 GPR98Q8WXG9 6306 aa8.25□□□□□ -1.09
HOXA3-205ENST00000522456 Q1T7F1 81 aa8.25□□□□□ -1.09
HOXA3-205ENST00000522456 PSPHP1O15172 72 aa8.24□□□□□ -1.09
HOXA3-205ENST00000522456 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
HOXA3-205ENST00000522456 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
HOXA3-205ENST00000522456 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
HOXA3-205ENST00000522456 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
HOXA3-205ENST00000522456 TNP1P09430 55 aa8.18□□□□□ -1.1
HOXA3-205ENST00000522456 KRTAP19-7Q3SYF9 63 aa8.18□□□□□ -1.1
HOXA3-205ENST00000522456 MT1EP04732 61 aa8.1□□□□□ -1.11
HOXA3-205ENST00000522456 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
HOXA3-205ENST00000522456 K7ERS5 55 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms