RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
SHPRH-209ENST00000521977 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
SHPRH-209ENST00000521977 MUC17Q685J3 4493 aa5.04□□□□□ -1.6
SHPRH-209ENST00000521977 ATP11AUNQ6ZP68 121 aa5.04□□□□□ -1.6
SHPRH-209ENST00000521977 NDUFC1O43677 76 aa5.03□□□□□ -1.6
SHPRH-209ENST00000521977 H7BZZ5 65 aa5.02□□□□□ -1.61
SHPRH-209ENST00000521977 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
SHPRH-209ENST00000521977 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
SHPRH-209ENST00000521977 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
SHPRH-209ENST00000521977 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
SHPRH-209ENST00000521977 SPINK7P58062 85 aa4.97□□□□□ -1.61
SHPRH-209ENST00000521977 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
SHPRH-209ENST00000521977 TMEM258P61165 79 aa4.95□□□□□ -1.62
SHPRH-209ENST00000521977 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
SHPRH-209ENST00000521977 HRES1P13985 223 aa4.94□□□□□ -1.62
SHPRH-209ENST00000521977 FAM236DA0A1B0GTK5 79 aa4.9□□□□□ -1.63
SHPRH-209ENST00000521977 FAM236CP0DP71 79 aa4.9□□□□□ -1.63
SHPRH-209ENST00000521977 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
SHPRH-209ENST00000521977 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
SHPRH-209ENST00000521977 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
SHPRH-209ENST00000521977 C4orf26Q17RF5 130 aa4.87□□□□□ -1.63
SHPRH-209ENST00000521977 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
SHPRH-209ENST00000521977 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
SHPRH-209ENST00000521977 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
SHPRH-209ENST00000521977 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.63
SHPRH-209ENST00000521977 A8MUN3 132 aa4.84□□□□□ -1.63
SHPRH-209ENST00000521977 ACYP2P14621 99 aa4.81□□□□□ -1.64
SHPRH-209ENST00000521977 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SHPRH-209ENST00000521977 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
SHPRH-209ENST00000521977 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
SHPRH-209ENST00000521977 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
SHPRH-209ENST00000521977 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
SHPRH-209ENST00000521977 COA5Q86WW8 74 aa4.77□□□□□ -1.65
SHPRH-209ENST00000521977 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
SHPRH-209ENST00000521977 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
SHPRH-209ENST00000521977 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
SHPRH-209ENST00000521977 CHKB-CPT1BH3BT56 60 aa4.69□□□□□ -1.66
SHPRH-209ENST00000521977 S4R3F8 94 aa4.69□□□□□ -1.66
SHPRH-209ENST00000521977 LCA10Q71F78 164 aa4.68□□□□□ -1.66
SHPRH-209ENST00000521977 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
SHPRH-209ENST00000521977 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.67
SHPRH-209ENST00000521977 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
SHPRH-209ENST00000521977 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
SHPRH-209ENST00000521977 Q1T7F1 81 aa4.6□□□□□ -1.67
SHPRH-209ENST00000521977 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
SHPRH-209ENST00000521977 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
SHPRH-209ENST00000521977 MT1HP80294 61 aa4.57□□□□□ -1.68
SHPRH-209ENST00000521977 V9GYY9 64 aa4.57□□□□□ -1.68
SHPRH-209ENST00000521977 H0YAA0 97 aa4.53□□□□□ -1.68
SHPRH-209ENST00000521977 A0A1B0GU69 56 aa4.5□□□□□ -1.69
SHPRH-209ENST00000521977 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-209ENST00000521977 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
SHPRH-209ENST00000521977 SEC61GP60059 68 aa4.48□□□□□ -1.69
SHPRH-209ENST00000521977 PSPHP1O15172 72 aa4.47□□□□□ -1.69
SHPRH-209ENST00000521977 Q5VV11 94 aa4.47□□□□□ -1.69
SHPRH-209ENST00000521977 M0R2T5 61 aa4.46□□□□□ -1.7
SHPRH-209ENST00000521977 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
SHPRH-209ENST00000521977 P0C880 135 aa4.45□□□□□ -1.7
SHPRH-209ENST00000521977 A0A1B0GU33 70 aa4.4□□□□□ -1.71
SHPRH-209ENST00000521977 UQCR11O14957 56 aa4.37□□□□□ -1.71
SHPRH-209ENST00000521977 MT2AP02795 61 aa4.37□□□□□ -1.71
SHPRH-209ENST00000521977 MT1FP04733 61 aa4.35□□□□□ -1.71
SHPRH-209ENST00000521977 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
SHPRH-209ENST00000521977 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
SHPRH-209ENST00000521977 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
SHPRH-209ENST00000521977 A6NED7 52 aa4.33□□□□□ -1.72
SHPRH-209ENST00000521977 M0QZ58 72 aa4.33□□□□□ -1.72
SHPRH-209ENST00000521977 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
SHPRH-209ENST00000521977 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
SHPRH-209ENST00000521977 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
SHPRH-209ENST00000521977 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
SHPRH-209ENST00000521977 R4GN34 69 aa4.31□□□□□ -1.72
SHPRH-209ENST00000521977 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
SHPRH-209ENST00000521977 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
SHPRH-209ENST00000521977 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
SHPRH-209ENST00000521977 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
SHPRH-209ENST00000521977 A8MU10 97 aa4.25□□□□□ -1.73
SHPRH-209ENST00000521977 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
SHPRH-209ENST00000521977 A0A0D9SG42 100 aa4.21□□□□□ -1.74
SHPRH-209ENST00000521977 A6NN06 94 aa4.2□□□□□ -1.74
SHPRH-209ENST00000521977 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
SHPRH-209ENST00000521977 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
SHPRH-209ENST00000521977 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
SHPRH-209ENST00000521977 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
SHPRH-209ENST00000521977 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
SHPRH-209ENST00000521977 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
SHPRH-209ENST00000521977 MT1BP07438 61 aa4.12□□□□□ -1.75
SHPRH-209ENST00000521977 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
SHPRH-209ENST00000521977 K7ERS5 55 aa4.1□□□□□ -1.75
SHPRH-209ENST00000521977 MT3P25713 68 aa4.09□□□□□ -1.75
SHPRH-209ENST00000521977 USH2AO75445 5202 aa4.09□□□□□ -1.75
SHPRH-209ENST00000521977 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
SHPRH-209ENST00000521977 PMAIP1Q13794 54 aa4□□□□□ -1.77
SHPRH-209ENST00000521977 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
SHPRH-209ENST00000521977 MT1XP80297 61 aa3.97□□□□□ -1.77
SHPRH-209ENST00000521977 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
SHPRH-209ENST00000521977 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
SHPRH-209ENST00000521977 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
SHPRH-209ENST00000521977 ROMO1P60602 79 aa3.94□□□□□ -1.78
SHPRH-209ENST00000521977 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms