RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SPANXA2-OT1Q8N9U9 137 aa11.65□□□□□ -0.55
PVT1-212ENST00000521951 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
PVT1-212ENST00000521951 NDUFC1O43677 76 aa11.63□□□□□ -0.55
PVT1-212ENST00000521951 H7BZZ5 65 aa11.6□□□□□ -0.55
PVT1-212ENST00000521951 ACYP2P14621 99 aa11.55□□□□□ -0.56
PVT1-212ENST00000521951 CSAG1Q6PB30 78 aa11.54□□□□□ -0.56
PVT1-212ENST00000521951 KRTAP9-8Q9BYQ0 159 aa11.5□□□□□ -0.57
PVT1-212ENST00000521951 MT2AP02795 61 aa11.41□□□□□ -0.58
PVT1-212ENST00000521951 CHKB-CPT1BH3BT56 60 aa11.34□□□□□ -0.59
PVT1-212ENST00000521951 MT1FP04733 61 aa11.33□□□□□ -0.6
PVT1-212ENST00000521951 KRTAP10-10P60014 251 aa11.3□□□□□ -0.6
PVT1-212ENST00000521951 COA5Q86WW8 74 aa11.3□□□□□ -0.6
PVT1-212ENST00000521951 LCE2BO14633 110 aa11.27□□□□□ -0.61
PVT1-212ENST00000521951 PCP4P48539 62 aa11.25□□□□□ -0.61
PVT1-212ENST00000521951 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
PVT1-212ENST00000521951 ATP5EP56381 51 aaPredicted RBP11.25□□□□□ -0.61
PVT1-212ENST00000521951 TMEM258P61165 79 aa11.24□□□□□ -0.61
PVT1-212ENST00000521951 H0YAA0 97 aa11.19□□□□□ -0.62
PVT1-212ENST00000521951 ADM2Q7Z4H4 148 aa11.12□□□□□ -0.63
PVT1-212ENST00000521951 KRTAP9-3Q9BYQ3 159 aa11.12□□□□□ -0.63
PVT1-212ENST00000521951 KRTAP9-2Q9BYQ4 174 aa11.03□□□□□ -0.64
PVT1-212ENST00000521951 P0C880 135 aa10.99□□□□□ -0.65
PVT1-212ENST00000521951 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
PVT1-212ENST00000521951 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.66
PVT1-212ENST00000521951 SERP1Q9Y6X1 66 aa10.89□□□□□ -0.67
PVT1-212ENST00000521951 SPRR2GQ9BYE4 73 aa10.87□□□□□ -0.67
PVT1-212ENST00000521951 SEC61GP60059 68 aa10.79□□□□□ -0.68
PVT1-212ENST00000521951 R4GN34 69 aa10.77□□□□□ -0.69
PVT1-212ENST00000521951 USH2AO75445 5202 aa10.73□□□□□ -0.69
PVT1-212ENST00000521951 M0QZ58 72 aa10.72□□□□□ -0.69
PVT1-212ENST00000521951 A0A1B0GU69 56 aa10.69□□□□□ -0.7
PVT1-212ENST00000521951 KRTAP19-8Q3LI54 63 aa10.68□□□□□ -0.7
PVT1-212ENST00000521951 LINC01558Q9Y6Z2 57 aa10.67□□□□□ -0.7
PVT1-212ENST00000521951 Q5VV11 94 aa10.61□□□□□ -0.71
PVT1-212ENST00000521951 MT1BP07438 61 aa10.59□□□□□ -0.71
PVT1-212ENST00000521951 RPS28P62857 69 aaKnown RBP10.59□□□□□ -0.71
PVT1-212ENST00000521951 FSIP2Q5CZC0 6907 aa10.57□□□□□ -0.72
PVT1-212ENST00000521951 A0A1B0GU33 70 aa10.57□□□□□ -0.72
PVT1-212ENST00000521951 KRTAP13-4Q3LI77 160 aa10.56□□□□□ -0.72
PVT1-212ENST00000521951 PRR15LQ9BU68 103 aa10.56□□□□□ -0.72
PVT1-212ENST00000521951 CRCT1Q9UGL9 99 aa10.54□□□□□ -0.72
PVT1-212ENST00000521951 LINC01554Q52M75 96 aa10.53□□□□□ -0.72
PVT1-212ENST00000521951 SMIM26A0A096LP01 95 aa10.53□□□□□ -0.72
PVT1-212ENST00000521951 SSPOA2VEC9 5147 aa10.49□□□□□ -0.73
PVT1-212ENST00000521951 V9GYY9 64 aa10.48□□□□□ -0.73
PVT1-212ENST00000521951 Q1T7F1 81 aa10.47□□□□□ -0.73
PVT1-212ENST00000521951 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
PVT1-212ENST00000521951 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
PVT1-212ENST00000521951 KRTAP19-6Q3LI70 58 aa10.38□□□□□ -0.75
PVT1-212ENST00000521951 PLAC4Q8WY50 150 aa10.38□□□□□ -0.75
PVT1-212ENST00000521951 PSPHP1O15172 72 aa10.33□□□□□ -0.76
PVT1-212ENST00000521951 A6NN06 94 aa10.32□□□□□ -0.76
PVT1-212ENST00000521951 A0A0D9SG42 100 aa10.3□□□□□ -0.76
PVT1-212ENST00000521951 UQCR11O14957 56 aa10.25□□□□□ -0.77
PVT1-212ENST00000521951 A8MU10 97 aa10.2□□□□□ -0.78
PVT1-212ENST00000521951 KRTAP10-5P60370 271 aa10.19□□□□□ -0.78
PVT1-212ENST00000521951 FCGBPQ9Y6R7 5405 aaPredicted RBP10.15□□□□□ -0.78
PVT1-212ENST00000521951 KRTAP12-1P59990 96 aa10.12□□□□□ -0.79
PVT1-212ENST00000521951 MT1XP80297 61 aa10.11□□□□□ -0.79
PVT1-212ENST00000521951 SPINT4Q6UDR6 99 aa10.11□□□□□ -0.79
PVT1-212ENST00000521951 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
PVT1-212ENST00000521951 KRTAP12-2P59991 146 aa10.06□□□□□ -0.8
PVT1-212ENST00000521951 PRO2289Q9P1D8 64 aa10.06□□□□□ -0.8
PVT1-212ENST00000521951 A6NED7 52 aa10.01□□□□□ -0.81
PVT1-212ENST00000521951 CAMK2N1Q7Z7J9 78 aa10.01□□□□□ -0.81
PVT1-212ENST00000521951 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.78□□□□□ -0.84
PVT1-212ENST00000521951 K7ERS5 55 aa9.73□□□□□ -0.85
PVT1-212ENST00000521951 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
PVT1-212ENST00000521951 KRTAP10-7P60409 375 aaPredicted RBP9.67□□□□□ -0.86
PVT1-212ENST00000521951 MACF1Q9UPN3 7388 aaKnown RBP9.67□□□□□ -0.86
PVT1-212ENST00000521951 C10orf95Q9H7T3 257 aa9.62□□□□□ -0.87
PVT1-212ENST00000521951 LOC100996750A0A140TA64 210 aa9.61□□□□□ -0.87
PVT1-212ENST00000521951 KRTAP4-6Q9BYQ5 205 aa9.61□□□□□ -0.87
PVT1-212ENST00000521951 KRTAP10-12P60413 245 aa9.6□□□□□ -0.87
PVT1-212ENST00000521951 KRTAP4-8A0A0G2JLE6 195 aa9.46□□□□□ -0.9
PVT1-212ENST00000521951 KRTAP4-8Q9BYQ9 185 aa9.46□□□□□ -0.9
PVT1-212ENST00000521951 KMT2DO14686 5537 aa9.44□□□□□ -0.9
PVT1-212ENST00000521951 KRTAP9-7A8MTY7 169 aa9.44□□□□□ -0.9
PVT1-212ENST00000521951 BRK1Q8WUW1 75 aa9.43□□□□□ -0.9
PVT1-212ENST00000521951 TNP1P09430 55 aa9.42□□□□□ -0.9
PVT1-212ENST00000521951 SYNE2Q8WXH0 6885 aaKnown RBP9.41□□□□□ -0.9
PVT1-212ENST00000521951 KRTAP6-3Q3LI67 103 aa9.39□□□□□ -0.91
PVT1-212ENST00000521951 KRTAP8-1Q8IUC2 63 aa9.36□□□□□ -0.91
PVT1-212ENST00000521951 KRTAP5-9P26371 169 aa9.26□□□□□ -0.93
PVT1-212ENST00000521951 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
PVT1-212ENST00000521951 ROMO1P60602 79 aa9.24□□□□□ -0.93
PVT1-212ENST00000521951 SPRR2FQ96RM1 72 aa9.16□□□□□ -0.94
PVT1-212ENST00000521951 LCE3AQ5TA76 89 aa9.15□□□□□ -0.94
PVT1-212ENST00000521951 KRTAP19-7Q3SYF9 63 aa9.02□□□□□ -0.97
PVT1-212ENST00000521951 KRTAP19-5Q3LI72 72 aa9□□□□□ -0.97
PVT1-212ENST00000521951 MUC12Q9UKN1 5478 aa8.98□□□□□ -0.97
PVT1-212ENST00000521951 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
PVT1-212ENST00000521951 MT1EP04732 61 aa8.9□□□□□ -0.98
PVT1-212ENST00000521951 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
PVT1-212ENST00000521951 PRO0628Q9UI54 55 aa8.9□□□□□ -0.99
PVT1-212ENST00000521951 SPRR2EP22531 72 aa8.85□□□□□ -0.99
PVT1-212ENST00000521951 SPRR2BP35325 72 aa8.85□□□□□ -0.99
PVT1-212ENST00000521951 SPRR2AP35326 72 aa8.85□□□□□ -0.99
PVT1-212ENST00000521951 LCE1AQ5T7P2 110 aa8.85□□□□□ -0.99
PVT1-212ENST00000521951 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms