RNA–Protein interactions for RNA: ENST00000521723.1

PDGFRB-209, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 5

Gene PDGFRB, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-209ENST00000521723 USH2AO75445 5202 aa5.04□□□□□ -1.6
PDGFRB-209ENST00000521723 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
PDGFRB-209ENST00000521723 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
PDGFRB-209ENST00000521723 SMIM20Q8N5G0 67 aa5.02□□□□□ -1.61
PDGFRB-209ENST00000521723 TRAV7A0A075B6U4 112 aa4.99□□□□□ -1.61
PDGFRB-209ENST00000521723 NDUFC1O43677 76 aa4.99□□□□□ -1.61
PDGFRB-209ENST00000521723 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
PDGFRB-209ENST00000521723 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
PDGFRB-209ENST00000521723 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
PDGFRB-209ENST00000521723 H0YAA0 97 aa4.93□□□□□ -1.62
PDGFRB-209ENST00000521723 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
PDGFRB-209ENST00000521723 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
PDGFRB-209ENST00000521723 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
PDGFRB-209ENST00000521723 SERP2Q8N6R1 65 aa4.88□□□□□ -1.63
PDGFRB-209ENST00000521723 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
PDGFRB-209ENST00000521723 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
PDGFRB-209ENST00000521723 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
PDGFRB-209ENST00000521723 ACYP2P14621 99 aa4.85□□□□□ -1.63
PDGFRB-209ENST00000521723 Q5VV11 94 aa4.85□□□□□ -1.63
PDGFRB-209ENST00000521723 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
PDGFRB-209ENST00000521723 MT1BP07438 61 aa4.84□□□□□ -1.63
PDGFRB-209ENST00000521723 C20orf197Q8N268 126 aa4.84□□□□□ -1.63
PDGFRB-209ENST00000521723 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
PDGFRB-209ENST00000521723 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
PDGFRB-209ENST00000521723 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
PDGFRB-209ENST00000521723 CHKB-CPT1BH3BT56 60 aa4.76□□□□□ -1.65
PDGFRB-209ENST00000521723 P0C880 135 aa4.76□□□□□ -1.65
PDGFRB-209ENST00000521723 COX7CP15954 63 aa4.76□□□□□ -1.65
PDGFRB-209ENST00000521723 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
PDGFRB-209ENST00000521723 A6NN06 94 aa4.73□□□□□ -1.65
PDGFRB-209ENST00000521723 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
PDGFRB-209ENST00000521723 R4GN34 69 aa4.72□□□□□ -1.65
PDGFRB-209ENST00000521723 M0QZ58 72 aa4.7□□□□□ -1.66
PDGFRB-209ENST00000521723 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
PDGFRB-209ENST00000521723 H7BZZ5 65 aa4.66□□□□□ -1.66
PDGFRB-209ENST00000521723 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
PDGFRB-209ENST00000521723 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
PDGFRB-209ENST00000521723 COA5Q86WW8 74 aa4.65□□□□□ -1.67
PDGFRB-209ENST00000521723 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
PDGFRB-209ENST00000521723 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
PDGFRB-209ENST00000521723 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
PDGFRB-209ENST00000521723 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
PDGFRB-209ENST00000521723 MT1XP80297 61 aa4.57□□□□□ -1.68
PDGFRB-209ENST00000521723 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
PDGFRB-209ENST00000521723 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
PDGFRB-209ENST00000521723 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
PDGFRB-209ENST00000521723 SEC61GP60059 68 aa4.52□□□□□ -1.69
PDGFRB-209ENST00000521723 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
PDGFRB-209ENST00000521723 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
PDGFRB-209ENST00000521723 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
PDGFRB-209ENST00000521723 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
PDGFRB-209ENST00000521723 A0A1B0GU33 70 aa4.43□□□□□ -1.7
PDGFRB-209ENST00000521723 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
PDGFRB-209ENST00000521723 A0A1B0GU69 56 aa4.41□□□□□ -1.7
PDGFRB-209ENST00000521723 TMEM258P61165 79 aa4.41□□□□□ -1.7
PDGFRB-209ENST00000521723 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
PDGFRB-209ENST00000521723 A0A0D9SG42 100 aa4.38□□□□□ -1.71
PDGFRB-209ENST00000521723 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
PDGFRB-209ENST00000521723 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
PDGFRB-209ENST00000521723 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
PDGFRB-209ENST00000521723 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
PDGFRB-209ENST00000521723 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
PDGFRB-209ENST00000521723 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
PDGFRB-209ENST00000521723 KMT2DO14686 5537 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
PDGFRB-209ENST00000521723 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
PDGFRB-209ENST00000521723 NEBP20929 6669 aa4.29□□□□□ -1.72
PDGFRB-209ENST00000521723 A8MU10 97 aa4.26□□□□□ -1.73
PDGFRB-209ENST00000521723 SPRR2EP22531 72 aa4.22□□□□□ -1.73
PDGFRB-209ENST00000521723 SPRR2BP35325 72 aa4.22□□□□□ -1.73
PDGFRB-209ENST00000521723 SPRR2AP35326 72 aa4.22□□□□□ -1.73
PDGFRB-209ENST00000521723 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
PDGFRB-209ENST00000521723 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
PDGFRB-209ENST00000521723 UQCR11O14957 56 aa4.18□□□□□ -1.74
PDGFRB-209ENST00000521723 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
PDGFRB-209ENST00000521723 V9GYY9 64 aa4.15□□□□□ -1.75
PDGFRB-209ENST00000521723 Q1T7F1 81 aa4.12□□□□□ -1.75
PDGFRB-209ENST00000521723 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
PDGFRB-209ENST00000521723 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
PDGFRB-209ENST00000521723 PSPHP1O15172 72 aa4.09□□□□□ -1.75
PDGFRB-209ENST00000521723 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
PDGFRB-209ENST00000521723 PCP4P48539 62 aa4.09□□□□□ -1.75
PDGFRB-209ENST00000521723 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
PDGFRB-209ENST00000521723 SPRR2DP22532 72 aa4.08□□□□□ -1.76
PDGFRB-209ENST00000521723 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
PDGFRB-209ENST00000521723 TNP1P09430 55 aa4.07□□□□□ -1.76
PDGFRB-209ENST00000521723 MT1EP04732 61 aa4.04□□□□□ -1.76
PDGFRB-209ENST00000521723 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
PDGFRB-209ENST00000521723 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
PDGFRB-209ENST00000521723 K7ERS5 55 aa4□□□□□ -1.77
PDGFRB-209ENST00000521723 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
PDGFRB-209ENST00000521723 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
PDGFRB-209ENST00000521723 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
PDGFRB-209ENST00000521723 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
PDGFRB-209ENST00000521723 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms