RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CLK4-209ENST00000521621 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CLK4-209ENST00000521621 USH2AO75445 5202 aa4.35□□□□□ -1.71
CLK4-209ENST00000521621 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
CLK4-209ENST00000521621 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
CLK4-209ENST00000521621 MT-ATP8P03928 68 aa4.34□□□□□ -1.72
CLK4-209ENST00000521621 SCGB1A1P11684 91 aa4.34□□□□□ -1.72
CLK4-209ENST00000521621 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.72
CLK4-209ENST00000521621 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
CLK4-209ENST00000521621 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
CLK4-209ENST00000521621 NDUFC1O43677 76 aa4.31□□□□□ -1.72
CLK4-209ENST00000521621 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
CLK4-209ENST00000521621 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
CLK4-209ENST00000521621 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
CLK4-209ENST00000521621 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
CLK4-209ENST00000521621 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
CLK4-209ENST00000521621 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
CLK4-209ENST00000521621 SPANXA2-OT1Q8N9U9 137 aa4.23□□□□□ -1.73
CLK4-209ENST00000521621 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
CLK4-209ENST00000521621 MT1BP07438 61 aa4.22□□□□□ -1.73
CLK4-209ENST00000521621 Q5VV11 94 aa4.22□□□□□ -1.73
CLK4-209ENST00000521621 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
CLK4-209ENST00000521621 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
CLK4-209ENST00000521621 ACYP2P14621 99 aa4.21□□□□□ -1.73
CLK4-209ENST00000521621 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
CLK4-209ENST00000521621 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
CLK4-209ENST00000521621 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
CLK4-209ENST00000521621 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CLK4-209ENST00000521621 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
CLK4-209ENST00000521621 COX7CP15954 63 aa4.12□□□□□ -1.75
CLK4-209ENST00000521621 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
CLK4-209ENST00000521621 SNURFQ9Y675 71 aa4.11□□□□□ -1.75
CLK4-209ENST00000521621 A6NN06 94 aa4.08□□□□□ -1.76
CLK4-209ENST00000521621 P0C880 135 aa4.07□□□□□ -1.76
CLK4-209ENST00000521621 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
CLK4-209ENST00000521621 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
CLK4-209ENST00000521621 R4GN34 69 aa4.06□□□□□ -1.76
CLK4-209ENST00000521621 H3BS24 57 aa4.04□□□□□ -1.76
CLK4-209ENST00000521621 M0QZ58 72 aa4.04□□□□□ -1.76
CLK4-209ENST00000521621 H7BZZ5 65 aa4.02□□□□□ -1.77
CLK4-209ENST00000521621 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
CLK4-209ENST00000521621 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
CLK4-209ENST00000521621 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
CLK4-209ENST00000521621 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
CLK4-209ENST00000521621 COA5Q86WW8 74 aa4□□□□□ -1.77
CLK4-209ENST00000521621 MT1XP80297 61 aa3.98□□□□□ -1.77
CLK4-209ENST00000521621 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
CLK4-209ENST00000521621 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
CLK4-209ENST00000521621 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
CLK4-209ENST00000521621 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
CLK4-209ENST00000521621 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
CLK4-209ENST00000521621 PCP4P48539 62 aa3.9□□□□□ -1.78
CLK4-209ENST00000521621 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.78
CLK4-209ENST00000521621 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.79
CLK4-209ENST00000521621 SEC61GP60059 68 aa3.89□□□□□ -1.79
CLK4-209ENST00000521621 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
CLK4-209ENST00000521621 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
CLK4-209ENST00000521621 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
CLK4-209ENST00000521621 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
CLK4-209ENST00000521621 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
CLK4-209ENST00000521621 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
CLK4-209ENST00000521621 TMEM258P61165 79 aa3.83□□□□□ -1.8
CLK4-209ENST00000521621 A0A1B0GU33 70 aa3.82□□□□□ -1.8
CLK4-209ENST00000521621 NEBP20929 6669 aa3.81□□□□□ -1.8
CLK4-209ENST00000521621 A0A1B0GU69 56 aa3.78□□□□□ -1.8
CLK4-209ENST00000521621 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
CLK4-209ENST00000521621 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
CLK4-209ENST00000521621 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
CLK4-209ENST00000521621 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
CLK4-209ENST00000521621 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
CLK4-209ENST00000521621 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
CLK4-209ENST00000521621 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
CLK4-209ENST00000521621 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
CLK4-209ENST00000521621 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
CLK4-209ENST00000521621 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
CLK4-209ENST00000521621 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
CLK4-209ENST00000521621 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CLK4-209ENST00000521621 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
CLK4-209ENST00000521621 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
CLK4-209ENST00000521621 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
CLK4-209ENST00000521621 A0A0D9SG42 100 aa3.66□□□□□ -1.82
CLK4-209ENST00000521621 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
CLK4-209ENST00000521621 SPRR2EP22531 72 aa3.64□□□□□ -1.83
CLK4-209ENST00000521621 SPRR2BP35325 72 aa3.64□□□□□ -1.83
CLK4-209ENST00000521621 SPRR2AP35326 72 aa3.64□□□□□ -1.83
CLK4-209ENST00000521621 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
CLK4-209ENST00000521621 V9GYY9 64 aa3.63□□□□□ -1.83
CLK4-209ENST00000521621 KMT2DO14686 5537 aa3.63□□□□□ -1.83
CLK4-209ENST00000521621 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
CLK4-209ENST00000521621 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
CLK4-209ENST00000521621 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
CLK4-209ENST00000521621 UQCR11O14957 56 aa3.62□□□□□ -1.83
CLK4-209ENST00000521621 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
CLK4-209ENST00000521621 Q1T7F1 81 aa3.61□□□□□ -1.83
CLK4-209ENST00000521621 A8MU10 97 aa3.59□□□□□ -1.83
CLK4-209ENST00000521621 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
CLK4-209ENST00000521621 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
CLK4-209ENST00000521621 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
CLK4-209ENST00000521621 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
CLK4-209ENST00000521621 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms