RNA–Protein interactions for RNA: ENST00000521438.1

NDRG1-218, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-218ENST00000521438 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
NDRG1-218ENST00000521438 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
NDRG1-218ENST00000521438 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
NDRG1-218ENST00000521438 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
NDRG1-218ENST00000521438 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
NDRG1-218ENST00000521438 KRTAP13-3Q3SY46 172 aa5.51□□□□□ -1.53
NDRG1-218ENST00000521438 LRP2P98164 4655 aa5.5□□□□□ -1.53
NDRG1-218ENST00000521438 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
NDRG1-218ENST00000521438 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
NDRG1-218ENST00000521438 HERC1Q15751 4861 aa5.49□□□□□ -1.53
NDRG1-218ENST00000521438 XP32Q5T750 250 aa5.41□□□□□ -1.54
NDRG1-218ENST00000521438 ACYP2P14621 99 aa5.4□□□□□ -1.55
NDRG1-218ENST00000521438 A8MUU9 505 aa5.39□□□□□ -1.55
NDRG1-218ENST00000521438 DMAC1Q96GE9 116 aa5.38□□□□□ -1.55
NDRG1-218ENST00000521438 C20orf166-AS1Q96NR2 134 aa5.38□□□□□ -1.55
NDRG1-218ENST00000521438 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
NDRG1-218ENST00000521438 MUC2Q02817 5179 aa5.36□□□□□ -1.55
NDRG1-218ENST00000521438 ROMO1P60602 79 aa5.34□□□□□ -1.55
NDRG1-218ENST00000521438 A0A1B0GU69 56 aa5.32□□□□□ -1.56
NDRG1-218ENST00000521438 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
NDRG1-218ENST00000521438 P0C880 135 aa5.29□□□□□ -1.56
NDRG1-218ENST00000521438 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
NDRG1-218ENST00000521438 UQCR11O14957 56 aa5.26□□□□□ -1.57
NDRG1-218ENST00000521438 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
NDRG1-218ENST00000521438 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
NDRG1-218ENST00000521438 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
NDRG1-218ENST00000521438 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
NDRG1-218ENST00000521438 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.57
NDRG1-218ENST00000521438 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
NDRG1-218ENST00000521438 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
NDRG1-218ENST00000521438 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
NDRG1-218ENST00000521438 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
NDRG1-218ENST00000521438 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
NDRG1-218ENST00000521438 H0YAA0 97 aa5.1□□□□□ -1.59
NDRG1-218ENST00000521438 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
NDRG1-218ENST00000521438 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
NDRG1-218ENST00000521438 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
NDRG1-218ENST00000521438 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
NDRG1-218ENST00000521438 S4R3F8 94 aa5.01□□□□□ -1.61
NDRG1-218ENST00000521438 LCE2BO14633 110 aa5□□□□□ -1.61
NDRG1-218ENST00000521438 H1FX-AS1Q4G0G2 97 aa4.99□□□□□ -1.61
NDRG1-218ENST00000521438 A0A1B0GU33 70 aa4.98□□□□□ -1.61
NDRG1-218ENST00000521438 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
NDRG1-218ENST00000521438 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
NDRG1-218ENST00000521438 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
NDRG1-218ENST00000521438 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
NDRG1-218ENST00000521438 A0A0D9SG42 100 aa4.89□□□□□ -1.63
NDRG1-218ENST00000521438 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
NDRG1-218ENST00000521438 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
NDRG1-218ENST00000521438 KRTAP13-4Q3LI77 160 aa4.87□□□□□ -1.63
NDRG1-218ENST00000521438 K7ERS5 55 aa4.86□□□□□ -1.63
NDRG1-218ENST00000521438 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.63
NDRG1-218ENST00000521438 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
NDRG1-218ENST00000521438 M0R2T5 61 aa4.81□□□□□ -1.64
NDRG1-218ENST00000521438 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
NDRG1-218ENST00000521438 MT1HP80294 61 aa4.74□□□□□ -1.65
NDRG1-218ENST00000521438 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
NDRG1-218ENST00000521438 M0QZ58 72 aa4.68□□□□□ -1.66
NDRG1-218ENST00000521438 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
NDRG1-218ENST00000521438 R4GN34 69 aa4.65□□□□□ -1.66
NDRG1-218ENST00000521438 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
NDRG1-218ENST00000521438 MT1FP04733 61 aa4.59□□□□□ -1.67
NDRG1-218ENST00000521438 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
NDRG1-218ENST00000521438 MT2AP02795 61 aa4.58□□□□□ -1.68
NDRG1-218ENST00000521438 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
NDRG1-218ENST00000521438 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
NDRG1-218ENST00000521438 USH2AO75445 5202 aa4.51□□□□□ -1.69
NDRG1-218ENST00000521438 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
NDRG1-218ENST00000521438 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
NDRG1-218ENST00000521438 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
NDRG1-218ENST00000521438 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
NDRG1-218ENST00000521438 PLAC4Q8WY50 150 aa4.36□□□□□ -1.71
NDRG1-218ENST00000521438 MT1BP07438 61 aa4.31□□□□□ -1.72
NDRG1-218ENST00000521438 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
NDRG1-218ENST00000521438 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
NDRG1-218ENST00000521438 KMT2DO14686 5537 aa4.21□□□□□ -1.74
NDRG1-218ENST00000521438 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
NDRG1-218ENST00000521438 MT1XP80297 61 aa4.18□□□□□ -1.74
NDRG1-218ENST00000521438 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
NDRG1-218ENST00000521438 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
NDRG1-218ENST00000521438 TNP1P09430 55 aa4.12□□□□□ -1.75
NDRG1-218ENST00000521438 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
NDRG1-218ENST00000521438 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
NDRG1-218ENST00000521438 INE1O15225 51 aa4.07□□□□□ -1.76
NDRG1-218ENST00000521438 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
NDRG1-218ENST00000521438 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
NDRG1-218ENST00000521438 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
NDRG1-218ENST00000521438 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
NDRG1-218ENST00000521438 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
NDRG1-218ENST00000521438 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
NDRG1-218ENST00000521438 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
NDRG1-218ENST00000521438 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
NDRG1-218ENST00000521438 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
NDRG1-218ENST00000521438 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
NDRG1-218ENST00000521438 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
NDRG1-218ENST00000521438 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.8
NDRG1-218ENST00000521438 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
NDRG1-218ENST00000521438 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
NDRG1-218ENST00000521438 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
NDRG1-218ENST00000521438 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms