RNA–Protein interactions for RNA: ENST00000521189.1

CLVS1-207, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-207ENST00000521189 FRAS1Q86XX4 4008 aa3□□□□□ -1.93
CLVS1-207ENST00000521189 TGP01266 2768 aa3□□□□□ -1.93
CLVS1-207ENST00000521189 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
CLVS1-207ENST00000521189 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
CLVS1-207ENST00000521189 BIRC6Q9NR09 4857 aa2.98□□□□□ -1.93
CLVS1-207ENST00000521189 TNP1P09430 55 aa2.98□□□□□ -1.93
CLVS1-207ENST00000521189 CUBNO60494 3623 aa2.97□□□□□ -1.93
CLVS1-207ENST00000521189 KRTAP10-3P60369 221 aa2.97□□□□□ -1.93
CLVS1-207ENST00000521189 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
CLVS1-207ENST00000521189 TRRAPQ9Y4A5 3859 aa2.97□□□□□ -1.93
CLVS1-207ENST00000521189 NSD1Q96L73 2696 aaPredicted RBP2.95□□□□□ -1.94
CLVS1-207ENST00000521189 NOTCH1P46531 2555 aa2.95□□□□□ -1.94
CLVS1-207ENST00000521189 KRTAP10-9P60411 292 aa2.95□□□□□ -1.94
CLVS1-207ENST00000521189 PKD1L1Q8TDX9 2849 aa2.94□□□□□ -1.94
CLVS1-207ENST00000521189 SMR3AQ99954 134 aa2.94□□□□□ -1.94
CLVS1-207ENST00000521189 COL7A1Q02388 2944 aa2.94□□□□□ -1.94
CLVS1-207ENST00000521189 CSMD3Q7Z407 3707 aa2.94□□□□□ -1.94
CLVS1-207ENST00000521189 KRTAP1-4P0C5Y4 121 aa2.93□□□□□ -1.94
CLVS1-207ENST00000521189 SVEP1Q4LDE5 3571 aa2.93□□□□□ -1.94
CLVS1-207ENST00000521189 VPS13CQ709C8 3753 aa2.93□□□□□ -1.94
CLVS1-207ENST00000521189 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
CLVS1-207ENST00000521189 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
CLVS1-207ENST00000521189 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
CLVS1-207ENST00000521189 RYR3Q15413 4870 aa2.92□□□□□ -1.94
CLVS1-207ENST00000521189 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
CLVS1-207ENST00000521189 FLNAP21333 2647 aaKnown RBP2.91□□□□□ -1.94
CLVS1-207ENST00000521189 ANK2Q01484 3957 aa2.91□□□□□ -1.94
CLVS1-207ENST00000521189 MXRA5Q9NR99 2828 aa2.91□□□□□ -1.94
CLVS1-207ENST00000521189 ANK3Q12955 4377 aaKnown RBP2.89□□□□□ -1.95
CLVS1-207ENST00000521189 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
CLVS1-207ENST00000521189 MT3P25713 68 aa2.88□□□□□ -1.95
CLVS1-207ENST00000521189 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
CLVS1-207ENST00000521189 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
CLVS1-207ENST00000521189 LYSTQ99698 3801 aa2.85□□□□□ -1.95
CLVS1-207ENST00000521189 STAB2Q8WWQ8 2551 aa2.84□□□□□ -1.95
CLVS1-207ENST00000521189 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.95
CLVS1-207ENST00000521189 DNAH10Q8IVF4 4471 aa2.84□□□□□ -1.96
CLVS1-207ENST00000521189 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
CLVS1-207ENST00000521189 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
CLVS1-207ENST00000521189 DNAH9Q9NYC9 4486 aa2.83□□□□□ -1.96
CLVS1-207ENST00000521189 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
CLVS1-207ENST00000521189 MGAM2Q2M2H8 2515 aa2.82□□□□□ -1.96
CLVS1-207ENST00000521189 ZANQ9Y493 2812 aa2.82□□□□□ -1.96
CLVS1-207ENST00000521189 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
CLVS1-207ENST00000521189 DNAH6Q9C0G6 4158 aa2.81□□□□□ -1.96
CLVS1-207ENST00000521189 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
CLVS1-207ENST00000521189 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
CLVS1-207ENST00000521189 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
CLVS1-207ENST00000521189 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
CLVS1-207ENST00000521189 KRTAP1-1Q07627 177 aa2.78□□□□□ -1.96
CLVS1-207ENST00000521189 HUWE1Q7Z6Z7 4374 aaKnown RBP2.78□□□□□ -1.96
CLVS1-207ENST00000521189 RYR1P21817 5038 aa2.76□□□□□ -1.97
CLVS1-207ENST00000521189 HERC2O95714 4834 aa2.76□□□□□ -1.97
CLVS1-207ENST00000521189 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
CLVS1-207ENST00000521189 RYR2Q92736 4967 aa2.74□□□□□ -1.97
CLVS1-207ENST00000521189 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
CLVS1-207ENST00000521189 DNAH7Q8WXX0 4024 aa2.73□□□□□ -1.97
CLVS1-207ENST00000521189 TENM1Q9UKZ4 2725 aa2.72□□□□□ -1.97
CLVS1-207ENST00000521189 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
CLVS1-207ENST00000521189 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
CLVS1-207ENST00000521189 HECTD4Q9Y4D8 3996 aa2.67□□□□□ -1.98
CLVS1-207ENST00000521189 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
CLVS1-207ENST00000521189 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
CLVS1-207ENST00000521189 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
CLVS1-207ENST00000521189 KMT2AQ03164 3969 aa2.64□□□□□ -1.99
CLVS1-207ENST00000521189 TENM3Q9P273 2699 aa2.62□□□□□ -1.99
CLVS1-207ENST00000521189 PKD1P98161 4303 aa2.62□□□□□ -1.99
CLVS1-207ENST00000521189 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
CLVS1-207ENST00000521189 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
CLVS1-207ENST00000521189 VPS13BQ7Z7G8 4022 aa2.58□□□□□ -2
CLVS1-207ENST00000521189 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
CLVS1-207ENST00000521189 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
CLVS1-207ENST00000521189 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
CLVS1-207ENST00000521189 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
CLVS1-207ENST00000521189 LCE3AQ5TA76 89 aa2.54□□□□□ -2
CLVS1-207ENST00000521189 M0R2T5 61 aa2.54□□□□□ -2
CLVS1-207ENST00000521189 LRP1Q07954 4544 aaKnown RBP2.54□□□□□ -2
CLVS1-207ENST00000521189 HSPG2P98160 4391 aa2.53□□□□□ -2
CLVS1-207ENST00000521189 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
CLVS1-207ENST00000521189 PKHD1L1Q86WI1 4243 aa2.52□□□□□ -2.01
CLVS1-207ENST00000521189 FAT3Q8TDW7 4589 aa2.51□□□□□ -2.01
CLVS1-207ENST00000521189 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CLVS1-207ENST00000521189 KRTAP10-5P60370 271 aa2.49□□□□□ -2.01
CLVS1-207ENST00000521189 HERC1Q15751 4861 aa2.49□□□□□ -2.01
CLVS1-207ENST00000521189 FAT2Q9NYQ8 4349 aa2.48□□□□□ -2.01
CLVS1-207ENST00000521189 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
CLVS1-207ENST00000521189 DNAH5Q8TE73 4624 aa2.47□□□□□ -2.01
CLVS1-207ENST00000521189 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
CLVS1-207ENST00000521189 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
CLVS1-207ENST00000521189 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
CLVS1-207ENST00000521189 PLECQ15149 4684 aaKnown RBP2.44□□□□□ -2.02
CLVS1-207ENST00000521189 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CLVS1-207ENST00000521189 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
CLVS1-207ENST00000521189 TNXBP22105 4242 aa2.42□□□□□ -2.02
CLVS1-207ENST00000521189 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
CLVS1-207ENST00000521189 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
CLVS1-207ENST00000521189 SMR3BP02814 79 aaPredicted RBP2.39□□□□□ -2.03
CLVS1-207ENST00000521189 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
CLVS1-207ENST00000521189 MUC2Q02817 5179 aa2.37□□□□□ -2.03
CLVS1-207ENST00000521189 KRTAP10-7P60409 375 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms