RNA–Protein interactions for RNA: ENST00000520747.1

FCHSD1-205, Transcript of FCH and double SH3 domains 1, humanhuman

TSL 2

Gene FCHSD1, Length 3,181 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-205ENST00000520747 C9orf92A6NGG3 77 aa6.77□□□□□ -1.33
FCHSD1-205ENST00000520747 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
FCHSD1-205ENST00000520747 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
FCHSD1-205ENST00000520747 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
FCHSD1-205ENST00000520747 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
FCHSD1-205ENST00000520747 SMR3BP02814 79 aaPredicted RBP6.73□□□□□ -1.33
FCHSD1-205ENST00000520747 A0A1B0GVY2 172 aa6.71□□□□□ -1.34
FCHSD1-205ENST00000520747 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
FCHSD1-205ENST00000520747 HSPG2P98160 4391 aa6.66□□□□□ -1.34
FCHSD1-205ENST00000520747 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
FCHSD1-205ENST00000520747 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
FCHSD1-205ENST00000520747 RYR1P21817 5038 aa6.62□□□□□ -1.35
FCHSD1-205ENST00000520747 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
FCHSD1-205ENST00000520747 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
FCHSD1-205ENST00000520747 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
FCHSD1-205ENST00000520747 MYCBP2O75592 4640 aa6.56□□□□□ -1.36
FCHSD1-205ENST00000520747 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
FCHSD1-205ENST00000520747 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
FCHSD1-205ENST00000520747 S4R3F8 94 aa6.49□□□□□ -1.37
FCHSD1-205ENST00000520747 PKHD1L1Q86WI1 4243 aa6.47□□□□□ -1.37
FCHSD1-205ENST00000520747 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
FCHSD1-205ENST00000520747 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
FCHSD1-205ENST00000520747 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
FCHSD1-205ENST00000520747 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
FCHSD1-205ENST00000520747 BIRC6Q9NR09 4857 aa6.42□□□□□ -1.38
FCHSD1-205ENST00000520747 Q5VSD8 79 aa6.41□□□□□ -1.38
FCHSD1-205ENST00000520747 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
FCHSD1-205ENST00000520747 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
FCHSD1-205ENST00000520747 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
FCHSD1-205ENST00000520747 HERC2O95714 4834 aa6.36□□□□□ -1.39
FCHSD1-205ENST00000520747 TNXBP22105 4242 aa6.35□□□□□ -1.39
FCHSD1-205ENST00000520747 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
FCHSD1-205ENST00000520747 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
FCHSD1-205ENST00000520747 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
FCHSD1-205ENST00000520747 XP32Q5T750 250 aa6.27□□□□□ -1.41
FCHSD1-205ENST00000520747 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
FCHSD1-205ENST00000520747 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
FCHSD1-205ENST00000520747 HERC1Q15751 4861 aa6.21□□□□□ -1.42
FCHSD1-205ENST00000520747 LPAP08519 4548 aa6.18□□□□□ -1.42
FCHSD1-205ENST00000520747 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
FCHSD1-205ENST00000520747 M0QZ58 72 aa6.09□□□□□ -1.43
FCHSD1-205ENST00000520747 LRP2P98164 4655 aa6.09□□□□□ -1.43
FCHSD1-205ENST00000520747 R4GN34 69 aa6.03□□□□□ -1.44
FCHSD1-205ENST00000520747 J3QL48 77 aa6□□□□□ -1.45
FCHSD1-205ENST00000520747 MUC2Q02817 5179 aa5.97□□□□□ -1.45
FCHSD1-205ENST00000520747 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
FCHSD1-205ENST00000520747 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
FCHSD1-205ENST00000520747 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
FCHSD1-205ENST00000520747 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
FCHSD1-205ENST00000520747 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
FCHSD1-205ENST00000520747 SEC61BP60468 96 aaKnown RBP5.79□□□□□ -1.48
FCHSD1-205ENST00000520747 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
FCHSD1-205ENST00000520747 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
FCHSD1-205ENST00000520747 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
FCHSD1-205ENST00000520747 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
FCHSD1-205ENST00000520747 TNP1P09430 55 aa5.56□□□□□ -1.52
FCHSD1-205ENST00000520747 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
FCHSD1-205ENST00000520747 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
FCHSD1-205ENST00000520747 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
FCHSD1-205ENST00000520747 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
FCHSD1-205ENST00000520747 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
FCHSD1-205ENST00000520747 INE1O15225 51 aa5.3□□□□□ -1.56
FCHSD1-205ENST00000520747 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
FCHSD1-205ENST00000520747 M0R2T5 61 aa5.2□□□□□ -1.58
FCHSD1-205ENST00000520747 MT1HP80294 61 aa5.2□□□□□ -1.58
FCHSD1-205ENST00000520747 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
FCHSD1-205ENST00000520747 USH2AO75445 5202 aa5.05□□□□□ -1.6
FCHSD1-205ENST00000520747 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
FCHSD1-205ENST00000520747 MT1FP04733 61 aa5.04□□□□□ -1.6
FCHSD1-205ENST00000520747 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
FCHSD1-205ENST00000520747 MT2AP02795 61 aa5.03□□□□□ -1.6
FCHSD1-205ENST00000520747 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
FCHSD1-205ENST00000520747 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
FCHSD1-205ENST00000520747 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
FCHSD1-205ENST00000520747 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
FCHSD1-205ENST00000520747 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
FCHSD1-205ENST00000520747 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
FCHSD1-205ENST00000520747 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
FCHSD1-205ENST00000520747 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
FCHSD1-205ENST00000520747 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
FCHSD1-205ENST00000520747 MT1BP07438 61 aa4.78□□□□□ -1.64
FCHSD1-205ENST00000520747 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
FCHSD1-205ENST00000520747 LCE2BO14633 110 aa4.75□□□□□ -1.65
FCHSD1-205ENST00000520747 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
FCHSD1-205ENST00000520747 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
FCHSD1-205ENST00000520747 MT1XP80297 61 aa4.67□□□□□ -1.66
FCHSD1-205ENST00000520747 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
FCHSD1-205ENST00000520747 KMT2DO14686 5537 aa4.65□□□□□ -1.66
FCHSD1-205ENST00000520747 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
FCHSD1-205ENST00000520747 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
FCHSD1-205ENST00000520747 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
FCHSD1-205ENST00000520747 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
FCHSD1-205ENST00000520747 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
FCHSD1-205ENST00000520747 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
FCHSD1-205ENST00000520747 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
FCHSD1-205ENST00000520747 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
FCHSD1-205ENST00000520747 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
FCHSD1-205ENST00000520747 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
FCHSD1-205ENST00000520747 KRTAP4-8A0A0G2JLE6 195 aa4.38□□□□□ -1.71
FCHSD1-205ENST00000520747 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms