RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 PMAIP1Q13794 54 aa10.89□□□□□ -0.67
PTP4A3-203ENST00000520105 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
PTP4A3-203ENST00000520105 COX6B2Q6YFQ2 88 aa10.84□□□□□ -0.67
PTP4A3-203ENST00000520105 PRR15LQ9BU68 103 aa10.83□□□□□ -0.68
PTP4A3-203ENST00000520105 KRTAP3-1Q9BYR8 98 aa10.83□□□□□ -0.68
PTP4A3-203ENST00000520105 LINC01558Q9Y6Z2 57 aa10.81□□□□□ -0.68
PTP4A3-203ENST00000520105 KRTAP19-2Q3LHN2 52 aa10.81□□□□□ -0.68
PTP4A3-203ENST00000520105 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.69
PTP4A3-203ENST00000520105 ACYP2P14621 99 aa10.71□□□□□ -0.69
PTP4A3-203ENST00000520105 DMAC1Q96GE9 116 aa10.71□□□□□ -0.69
PTP4A3-203ENST00000520105 FAT4Q6V0I7 4981 aa10.7□□□□□ -0.7
PTP4A3-203ENST00000520105 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
PTP4A3-203ENST00000520105 H1FX-AS1Q4G0G2 97 aa10.68□□□□□ -0.7
PTP4A3-203ENST00000520105 A6NED7 52 aa10.64□□□□□ -0.71
PTP4A3-203ENST00000520105 FLGP20930 4061 aaPredicted RBP10.62□□□□□ -0.71
PTP4A3-203ENST00000520105 CDC42SE1Q9NRR8 79 aa10.61□□□□□ -0.71
PTP4A3-203ENST00000520105 LCA10Q71F78 164 aa10.59□□□□□ -0.71
PTP4A3-203ENST00000520105 A8MU10 97 aa10.57□□□□□ -0.72
PTP4A3-203ENST00000520105 S4R3F8 94 aa10.53□□□□□ -0.72
PTP4A3-203ENST00000520105 MT1HP80294 61 aa10.49□□□□□ -0.73
PTP4A3-203ENST00000520105 KTN1-AS1Q86SY8 53 aa10.46□□□□□ -0.74
PTP4A3-203ENST00000520105 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.74
PTP4A3-203ENST00000520105 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
PTP4A3-203ENST00000520105 A6NN06 94 aa10.38□□□□□ -0.75
PTP4A3-203ENST00000520105 A0A1B0GU69 56 aa10.38□□□□□ -0.75
PTP4A3-203ENST00000520105 M0R2T5 61 aa10.37□□□□□ -0.75
PTP4A3-203ENST00000520105 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
PTP4A3-203ENST00000520105 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
PTP4A3-203ENST00000520105 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
PTP4A3-203ENST00000520105 UQCR11O14957 56 aa10.22□□□□□ -0.77
PTP4A3-203ENST00000520105 MIR22HGQ0VDD5 57 aa10.15□□□□□ -0.78
PTP4A3-203ENST00000520105 KRTAP10-6P60371 365 aaPredicted RBP10.14□□□□□ -0.79
PTP4A3-203ENST00000520105 H3BS24 57 aa10.12□□□□□ -0.79
PTP4A3-203ENST00000520105 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
PTP4A3-203ENST00000520105 KRTAP9-8Q9BYQ0 159 aa10.06□□□□□ -0.8
PTP4A3-203ENST00000520105 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
PTP4A3-203ENST00000520105 H0YAA0 97 aa10.03□□□□□ -0.8
PTP4A3-203ENST00000520105 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
PTP4A3-203ENST00000520105 MT2AP02795 61 aa10□□□□□ -0.81
PTP4A3-203ENST00000520105 P0C880 135 aa9.96□□□□□ -0.81
PTP4A3-203ENST00000520105 MT1FP04733 61 aa9.93□□□□□ -0.82
PTP4A3-203ENST00000520105 KRTAP10-10P60014 251 aa9.91□□□□□ -0.82
PTP4A3-203ENST00000520105 A0A1B0GU33 70 aa9.83□□□□□ -0.84
PTP4A3-203ENST00000520105 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
PTP4A3-203ENST00000520105 PRAC1Q96KF2 57 aa9.75□□□□□ -0.85
PTP4A3-203ENST00000520105 KRTAP9-3Q9BYQ3 159 aa9.7□□□□□ -0.86
PTP4A3-203ENST00000520105 CRIPTQ9P021 101 aa9.7□□□□□ -0.86
PTP4A3-203ENST00000520105 R4GN34 69 aa9.7□□□□□ -0.86
PTP4A3-203ENST00000520105 M0QZ58 72 aa9.68□□□□□ -0.86
PTP4A3-203ENST00000520105 KRTAP13-4Q3LI77 160 aa9.66□□□□□ -0.86
PTP4A3-203ENST00000520105 KRTAP19-1Q8IUB9 90 aa9.65□□□□□ -0.86
PTP4A3-203ENST00000520105 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
PTP4A3-203ENST00000520105 K7ERS5 55 aa9.55□□□□□ -0.88
PTP4A3-203ENST00000520105 LCE2BO14633 110 aa9.5□□□□□ -0.89
PTP4A3-203ENST00000520105 A0A0D9SG42 100 aa9.46□□□□□ -0.9
PTP4A3-203ENST00000520105 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
PTP4A3-203ENST00000520105 USH2AO75445 5202 aa9.41□□□□□ -0.9
PTP4A3-203ENST00000520105 KRTAP19-8Q3LI54 63 aa9.4□□□□□ -0.9
PTP4A3-203ENST00000520105 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
PTP4A3-203ENST00000520105 MT1BP07438 61 aa9.34□□□□□ -0.91
PTP4A3-203ENST00000520105 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
PTP4A3-203ENST00000520105 ROMO1P60602 79 aa9.3□□□□□ -0.92
PTP4A3-203ENST00000520105 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
PTP4A3-203ENST00000520105 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
PTP4A3-203ENST00000520105 SPINT4Q6UDR6 99 aa9.25□□□□□ -0.93
PTP4A3-203ENST00000520105 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
PTP4A3-203ENST00000520105 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
PTP4A3-203ENST00000520105 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
PTP4A3-203ENST00000520105 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
PTP4A3-203ENST00000520105 MT1XP80297 61 aa8.96□□□□□ -0.97
PTP4A3-203ENST00000520105 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.98
PTP4A3-203ENST00000520105 A0A0A0MQY5 61 aa8.94□□□□□ -0.98
PTP4A3-203ENST00000520105 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
PTP4A3-203ENST00000520105 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
PTP4A3-203ENST00000520105 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
PTP4A3-203ENST00000520105 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
PTP4A3-203ENST00000520105 C10orf95Q9H7T3 257 aa8.8□□□□□ -1
PTP4A3-203ENST00000520105 KRTAP9-6A0A140TA67 174 aa8.65□□□□□ -1.02
PTP4A3-203ENST00000520105 KRTAP10-7P60409 375 aaPredicted RBP8.61□□□□□ -1.03
PTP4A3-203ENST00000520105 TNP1P09430 55 aa8.53□□□□□ -1.04
PTP4A3-203ENST00000520105 KRTAP15-1Q3LI76 137 aa8.52□□□□□ -1.05
PTP4A3-203ENST00000520105 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
PTP4A3-203ENST00000520105 KMT2DO14686 5537 aa8.48□□□□□ -1.05
PTP4A3-203ENST00000520105 NDUFAF8A1L188 74 aa8.48□□□□□ -1.05
PTP4A3-203ENST00000520105 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
PTP4A3-203ENST00000520105 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
PTP4A3-203ENST00000520105 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
PTP4A3-203ENST00000520105 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
PTP4A3-203ENST00000520105 SYNE2Q8WXH0 6885 aaKnown RBP8.27□□□□□ -1.08
PTP4A3-203ENST00000520105 LCE3AQ5TA76 89 aa8.27□□□□□ -1.09
PTP4A3-203ENST00000520105 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.24□□□□□ -1.09
PTP4A3-203ENST00000520105 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
PTP4A3-203ENST00000520105 KRTAP23-1A1A580 65 aa8.17□□□□□ -1.1
PTP4A3-203ENST00000520105 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
PTP4A3-203ENST00000520105 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
PTP4A3-203ENST00000520105 KRTAP19-7Q3SYF9 63 aa8□□□□□ -1.13
PTP4A3-203ENST00000520105 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
PTP4A3-203ENST00000520105 KRTAP6-3Q3LI67 103 aa7.94□□□□□ -1.14
PTP4A3-203ENST00000520105 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
PTP4A3-203ENST00000520105 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms