RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 HSPG2P98160 4391 aa6.23□□□□□ -1.41
SPIDR-211ENST00000519401 PCLOQ9Y6V0 5065 aa6.23□□□□□ -1.41
SPIDR-211ENST00000519401 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
SPIDR-211ENST00000519401 Q8N1X5 172 aa6.22□□□□□ -1.41
SPIDR-211ENST00000519401 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.41
SPIDR-211ENST00000519401 LUZP6Q538Z0 58 aa6.21□□□□□ -1.41
SPIDR-211ENST00000519401 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
SPIDR-211ENST00000519401 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
SPIDR-211ENST00000519401 KRTAP10-1P60331 282 aa6.19□□□□□ -1.42
SPIDR-211ENST00000519401 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
SPIDR-211ENST00000519401 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.42
SPIDR-211ENST00000519401 FAT1Q14517 4588 aa6.13□□□□□ -1.43
SPIDR-211ENST00000519401 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
SPIDR-211ENST00000519401 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
SPIDR-211ENST00000519401 SMR3BP02814 79 aaPredicted RBP6.06□□□□□ -1.44
SPIDR-211ENST00000519401 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
SPIDR-211ENST00000519401 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SPIDR-211ENST00000519401 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
SPIDR-211ENST00000519401 Q5VSD8 79 aa6.02□□□□□ -1.45
SPIDR-211ENST00000519401 MYCBP2O75592 4640 aa5.99□□□□□ -1.45
SPIDR-211ENST00000519401 HERC1Q15751 4861 aa5.99□□□□□ -1.45
SPIDR-211ENST00000519401 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
SPIDR-211ENST00000519401 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
SPIDR-211ENST00000519401 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
SPIDR-211ENST00000519401 XP32Q5T750 250 aa5.94□□□□□ -1.46
SPIDR-211ENST00000519401 S4R3F8 94 aa5.93□□□□□ -1.46
SPIDR-211ENST00000519401 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
SPIDR-211ENST00000519401 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
SPIDR-211ENST00000519401 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
SPIDR-211ENST00000519401 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SPIDR-211ENST00000519401 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
SPIDR-211ENST00000519401 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
SPIDR-211ENST00000519401 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
SPIDR-211ENST00000519401 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
SPIDR-211ENST00000519401 J3QL48 77 aa5.81□□□□□ -1.48
SPIDR-211ENST00000519401 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
SPIDR-211ENST00000519401 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
SPIDR-211ENST00000519401 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
SPIDR-211ENST00000519401 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
SPIDR-211ENST00000519401 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
SPIDR-211ENST00000519401 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
SPIDR-211ENST00000519401 TNXBP22105 4242 aa5.71□□□□□ -1.49
SPIDR-211ENST00000519401 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
SPIDR-211ENST00000519401 M0QZ58 72 aa5.65□□□□□ -1.5
SPIDR-211ENST00000519401 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.5
SPIDR-211ENST00000519401 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
SPIDR-211ENST00000519401 LRP2P98164 4655 aa5.57□□□□□ -1.52
SPIDR-211ENST00000519401 LCE2BO14633 110 aa5.55□□□□□ -1.52
SPIDR-211ENST00000519401 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
SPIDR-211ENST00000519401 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
SPIDR-211ENST00000519401 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
SPIDR-211ENST00000519401 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
SPIDR-211ENST00000519401 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
SPIDR-211ENST00000519401 LPAP08519 4548 aa5.44□□□□□ -1.54
SPIDR-211ENST00000519401 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
SPIDR-211ENST00000519401 INE1O15225 51 aa5.34□□□□□ -1.55
SPIDR-211ENST00000519401 MUC2Q02817 5179 aa5.33□□□□□ -1.56
SPIDR-211ENST00000519401 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SPIDR-211ENST00000519401 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
SPIDR-211ENST00000519401 R4GN34 69 aa5.25□□□□□ -1.57
SPIDR-211ENST00000519401 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
SPIDR-211ENST00000519401 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
SPIDR-211ENST00000519401 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
SPIDR-211ENST00000519401 TNP1P09430 55 aa5.02□□□□□ -1.61
SPIDR-211ENST00000519401 LCE2CQ5TA81 110 aa5□□□□□ -1.61
SPIDR-211ENST00000519401 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
SPIDR-211ENST00000519401 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
SPIDR-211ENST00000519401 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
SPIDR-211ENST00000519401 MT1HP80294 61 aa4.86□□□□□ -1.63
SPIDR-211ENST00000519401 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
SPIDR-211ENST00000519401 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
SPIDR-211ENST00000519401 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
SPIDR-211ENST00000519401 M0R2T5 61 aa4.75□□□□□ -1.65
SPIDR-211ENST00000519401 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.65
SPIDR-211ENST00000519401 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
SPIDR-211ENST00000519401 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
SPIDR-211ENST00000519401 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
SPIDR-211ENST00000519401 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
SPIDR-211ENST00000519401 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
SPIDR-211ENST00000519401 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
SPIDR-211ENST00000519401 MT2AP02795 61 aa4.57□□□□□ -1.68
SPIDR-211ENST00000519401 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
SPIDR-211ENST00000519401 MT1FP04733 61 aa4.54□□□□□ -1.68
SPIDR-211ENST00000519401 USH2AO75445 5202 aa4.53□□□□□ -1.68
SPIDR-211ENST00000519401 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
SPIDR-211ENST00000519401 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
SPIDR-211ENST00000519401 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
SPIDR-211ENST00000519401 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
SPIDR-211ENST00000519401 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
SPIDR-211ENST00000519401 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
SPIDR-211ENST00000519401 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
SPIDR-211ENST00000519401 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
SPIDR-211ENST00000519401 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
SPIDR-211ENST00000519401 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
SPIDR-211ENST00000519401 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
SPIDR-211ENST00000519401 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
SPIDR-211ENST00000519401 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
SPIDR-211ENST00000519401 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
SPIDR-211ENST00000519401 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
SPIDR-211ENST00000519401 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 396.4 ms