RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 LINC00208Q96KT6 92 aa2.64□□□□□ -1.99
CTNNA1-212ENST00000518919 MRPL34Q9BQ48 92 aaKnown RBP2.64□□□□□ -1.99
CTNNA1-212ENST00000518919 KIAA1109Q2LD37 5005 aa2.63□□□□□ -1.99
CTNNA1-212ENST00000518919 EPPK1P58107 5090 aaKnown RBP2.62□□□□□ -1.99
CTNNA1-212ENST00000518919 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
CTNNA1-212ENST00000518919 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
CTNNA1-212ENST00000518919 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
CTNNA1-212ENST00000518919 TP53AIP1Q9HCN2 124 aa2.62□□□□□ -1.99
CTNNA1-212ENST00000518919 C4orf26Q17RF5 130 aa2.61□□□□□ -1.99
CTNNA1-212ENST00000518919 FP248Q71RG6 208 aaPredicted RBP2.61□□□□□ -1.99
CTNNA1-212ENST00000518919 LINC00304Q8N9R0 145 aa2.61□□□□□ -1.99
CTNNA1-212ENST00000518919 K7ERS5 55 aa2.6□□□□□ -1.99
CTNNA1-212ENST00000518919 SPINK1P00995 79 aa2.6□□□□□ -1.99
CTNNA1-212ENST00000518919 RPS29P62273 56 aaKnown RBP2.6□□□□□ -1.99
CTNNA1-212ENST00000518919 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
CTNNA1-212ENST00000518919 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CTNNA1-212ENST00000518919 MYCBP2O75592 4640 aa2.59□□□□□ -1.99
CTNNA1-212ENST00000518919 LINC00313P59037 77 aa2.59□□□□□ -1.99
CTNNA1-212ENST00000518919 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
CTNNA1-212ENST00000518919 PCOTHQ58A44 107 aa2.59□□□□□ -1.99
CTNNA1-212ENST00000518919 LOC101927531A0A1B0GV80 90 aa2.58□□□□□ -2
CTNNA1-212ENST00000518919 A8MUU9 505 aa2.58□□□□□ -2
CTNNA1-212ENST00000518919 KRTAP12-2P59991 146 aa2.58□□□□□ -2
CTNNA1-212ENST00000518919 SPAG11AQ6PDA7 123 aa2.58□□□□□ -2
CTNNA1-212ENST00000518919 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
CTNNA1-212ENST00000518919 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
CTNNA1-212ENST00000518919 FLG2Q5D862 2391 aaPredicted RBP2.57□□□□□ -2
CTNNA1-212ENST00000518919 Q5VSD8 79 aa2.56□□□□□ -2
CTNNA1-212ENST00000518919 HERC2O95714 4834 aa2.55□□□□□ -2
CTNNA1-212ENST00000518919 COA5Q86WW8 74 aa2.55□□□□□ -2
CTNNA1-212ENST00000518919 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
CTNNA1-212ENST00000518919 A6NED7 52 aa2.53□□□□□ -2
CTNNA1-212ENST00000518919 HRES1P13985 223 aa2.53□□□□□ -2
CTNNA1-212ENST00000518919 KRTAP10-8P60410 259 aa2.53□□□□□ -2
CTNNA1-212ENST00000518919 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
CTNNA1-212ENST00000518919 C9orf92A6NGG3 77 aa2.52□□□□□ -2.01
CTNNA1-212ENST00000518919 Q1T7F1 81 aa2.52□□□□□ -2.01
CTNNA1-212ENST00000518919 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
CTNNA1-212ENST00000518919 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
CTNNA1-212ENST00000518919 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
CTNNA1-212ENST00000518919 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CTNNA1-212ENST00000518919 ADM2Q7Z4H4 148 aa2.5□□□□□ -2.01
CTNNA1-212ENST00000518919 C7orf65Q6ZTY9 151 aa2.49□□□□□ -2.01
CTNNA1-212ENST00000518919 A8MUN3 132 aa2.48□□□□□ -2.01
CTNNA1-212ENST00000518919 Q5VV11 94 aa2.48□□□□□ -2.01
CTNNA1-212ENST00000518919 DMBT1Q9UGM3 2413 aaPredicted RBP2.47□□□□□ -2.01
CTNNA1-212ENST00000518919 PRR15LQ9BU68 103 aa2.47□□□□□ -2.01
CTNNA1-212ENST00000518919 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
CTNNA1-212ENST00000518919 ACYP2P14621 99 aa2.46□□□□□ -2.02
CTNNA1-212ENST00000518919 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
CTNNA1-212ENST00000518919 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
CTNNA1-212ENST00000518919 R4GN34 69 aa2.45□□□□□ -2.02
CTNNA1-212ENST00000518919 LRP2P98164 4655 aa2.45□□□□□ -2.02
CTNNA1-212ENST00000518919 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
CTNNA1-212ENST00000518919 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-212ENST00000518919 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
CTNNA1-212ENST00000518919 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
CTNNA1-212ENST00000518919 LPAP08519 4548 aa2.43□□□□□ -2.02
CTNNA1-212ENST00000518919 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
CTNNA1-212ENST00000518919 SPINK7P58062 85 aa2.43□□□□□ -2.02
CTNNA1-212ENST00000518919 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
CTNNA1-212ENST00000518919 COX6B2Q6YFQ2 88 aa2.4□□□□□ -2.03
CTNNA1-212ENST00000518919 HERC1Q15751 4861 aa2.4□□□□□ -2.03
CTNNA1-212ENST00000518919 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
CTNNA1-212ENST00000518919 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
CTNNA1-212ENST00000518919 ATP11AUNQ6ZP68 121 aa2.39□□□□□ -2.03
CTNNA1-212ENST00000518919 LCA10Q71F78 164 aa2.39□□□□□ -2.03
CTNNA1-212ENST00000518919 A0A1B0GU33 70 aa2.38□□□□□ -2.03
CTNNA1-212ENST00000518919 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
CTNNA1-212ENST00000518919 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
CTNNA1-212ENST00000518919 A0A1B0GU69 56 aa2.36□□□□□ -2.03
CTNNA1-212ENST00000518919 SPTSSBQ8NFR3 76 aa2.34□□□□□ -2.03
CTNNA1-212ENST00000518919 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
CTNNA1-212ENST00000518919 A6NN06 94 aa2.32□□□□□ -2.04
CTNNA1-212ENST00000518919 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
CTNNA1-212ENST00000518919 S4R3F8 94 aa2.32□□□□□ -2.04
CTNNA1-212ENST00000518919 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
CTNNA1-212ENST00000518919 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
CTNNA1-212ENST00000518919 H0YAA0 97 aa2.3□□□□□ -2.04
CTNNA1-212ENST00000518919 UQCR11O14957 56 aa2.3□□□□□ -2.04
CTNNA1-212ENST00000518919 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
CTNNA1-212ENST00000518919 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
CTNNA1-212ENST00000518919 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
CTNNA1-212ENST00000518919 KRTAP19-2Q3LHN2 52 aa2.27□□□□□ -2.05
CTNNA1-212ENST00000518919 P0C880 135 aa2.26□□□□□ -2.05
CTNNA1-212ENST00000518919 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
CTNNA1-212ENST00000518919 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
CTNNA1-212ENST00000518919 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
CTNNA1-212ENST00000518919 CSAG1Q6PB30 78 aa2.22□□□□□ -2.05
CTNNA1-212ENST00000518919 MUC2Q02817 5179 aa2.21□□□□□ -2.06
CTNNA1-212ENST00000518919 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
CTNNA1-212ENST00000518919 A0A0D9SG42 100 aa2.19□□□□□ -2.06
CTNNA1-212ENST00000518919 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
CTNNA1-212ENST00000518919 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
CTNNA1-212ENST00000518919 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
CTNNA1-212ENST00000518919 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CTNNA1-212ENST00000518919 M0QZ58 72 aa2.15□□□□□ -2.07
CTNNA1-212ENST00000518919 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
CTNNA1-212ENST00000518919 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
CTNNA1-212ENST00000518919 ROMO1P60602 79 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms