RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
PVT1-206ENST00000517838 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
PVT1-206ENST00000517838 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
PVT1-206ENST00000517838 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
PVT1-206ENST00000517838 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
PVT1-206ENST00000517838 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
PVT1-206ENST00000517838 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
PVT1-206ENST00000517838 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
PVT1-206ENST00000517838 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
PVT1-206ENST00000517838 CYP4F30PQ9H0H9 118 aa4.11□□□□□ -1.75
PVT1-206ENST00000517838 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.75
PVT1-206ENST00000517838 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
PVT1-206ENST00000517838 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
PVT1-206ENST00000517838 Q5W150 140 aa4.07□□□□□ -1.76
PVT1-206ENST00000517838 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
PVT1-206ENST00000517838 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
PVT1-206ENST00000517838 C9orf92A6NGG3 77 aa4.05□□□□□ -1.76
PVT1-206ENST00000517838 KRTAP16-1A8MUX0 517 aa4.05□□□□□ -1.76
PVT1-206ENST00000517838 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
PVT1-206ENST00000517838 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
PVT1-206ENST00000517838 COA5Q86WW8 74 aa4.05□□□□□ -1.76
PVT1-206ENST00000517838 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
PVT1-206ENST00000517838 FP248Q71RG6 208 aaPredicted RBP4.04□□□□□ -1.76
PVT1-206ENST00000517838 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
PVT1-206ENST00000517838 MT1HP80294 61 aa4.03□□□□□ -1.76
PVT1-206ENST00000517838 V9GYY9 64 aa4.03□□□□□ -1.76
PVT1-206ENST00000517838 CHKB-CPT1BH3BT56 60 aa4.02□□□□□ -1.77
PVT1-206ENST00000517838 HRES1P13985 223 aa4.01□□□□□ -1.77
PVT1-206ENST00000517838 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
PVT1-206ENST00000517838 C7orf65Q6ZTY9 151 aa4□□□□□ -1.77
PVT1-206ENST00000517838 ACYP2P14621 99 aa3.99□□□□□ -1.77
PVT1-206ENST00000517838 Q1T7F1 81 aa3.98□□□□□ -1.77
PVT1-206ENST00000517838 USH2AO75445 5202 aa3.98□□□□□ -1.77
PVT1-206ENST00000517838 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
PVT1-206ENST00000517838 PSPHP1O15172 72 aa3.97□□□□□ -1.77
PVT1-206ENST00000517838 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
PVT1-206ENST00000517838 DMAC1Q96GE9 116 aa3.96□□□□□ -1.78
PVT1-206ENST00000517838 A8MUU9 505 aa3.95□□□□□ -1.78
PVT1-206ENST00000517838 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
PVT1-206ENST00000517838 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
PVT1-206ENST00000517838 A8MUN3 132 aa3.94□□□□□ -1.78
PVT1-206ENST00000517838 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
PVT1-206ENST00000517838 Q75L30 129 aa3.92□□□□□ -1.78
PVT1-206ENST00000517838 M0R2T5 61 aa3.9□□□□□ -1.79
PVT1-206ENST00000517838 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
PVT1-206ENST00000517838 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
PVT1-206ENST00000517838 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
PVT1-206ENST00000517838 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
PVT1-206ENST00000517838 A6NED7 52 aa3.88□□□□□ -1.79
PVT1-206ENST00000517838 SPINK7P58062 85 aa3.88□□□□□ -1.79
PVT1-206ENST00000517838 Q5VV11 94 aa3.88□□□□□ -1.79
PVT1-206ENST00000517838 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
PVT1-206ENST00000517838 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
PVT1-206ENST00000517838 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
PVT1-206ENST00000517838 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
PVT1-206ENST00000517838 A0A1B0GU69 56 aa3.85□□□□□ -1.79
PVT1-206ENST00000517838 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
PVT1-206ENST00000517838 SEC61GP60059 68 aa3.83□□□□□ -1.8
PVT1-206ENST00000517838 COX6B2Q6YFQ2 88 aa3.83□□□□□ -1.8
PVT1-206ENST00000517838 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
PVT1-206ENST00000517838 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
PVT1-206ENST00000517838 UQCR11O14957 56 aa3.74□□□□□ -1.81
PVT1-206ENST00000517838 S4R3F8 94 aa3.74□□□□□ -1.81
PVT1-206ENST00000517838 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
PVT1-206ENST00000517838 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
PVT1-206ENST00000517838 A8MU10 97 aa3.72□□□□□ -1.81
PVT1-206ENST00000517838 LCA10Q71F78 164 aa3.72□□□□□ -1.81
PVT1-206ENST00000517838 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
PVT1-206ENST00000517838 MT2AP02795 61 aa3.7□□□□□ -1.82
PVT1-206ENST00000517838 H1FX-AS1Q4G0G2 97 aa3.69□□□□□ -1.82
PVT1-206ENST00000517838 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
PVT1-206ENST00000517838 MT1FP04733 61 aa3.67□□□□□ -1.82
PVT1-206ENST00000517838 A0A1B0GU33 70 aa3.66□□□□□ -1.82
PVT1-206ENST00000517838 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
PVT1-206ENST00000517838 NEBP20929 6669 aa3.65□□□□□ -1.83
PVT1-206ENST00000517838 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
PVT1-206ENST00000517838 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
PVT1-206ENST00000517838 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
PVT1-206ENST00000517838 A6NN06 94 aa3.61□□□□□ -1.83
PVT1-206ENST00000517838 CSAG1Q6PB30 78 aa3.61□□□□□ -1.83
PVT1-206ENST00000517838 K7ERS5 55 aa3.6□□□□□ -1.83
PVT1-206ENST00000517838 H0YAA0 97 aa3.59□□□□□ -1.83
PVT1-206ENST00000517838 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
PVT1-206ENST00000517838 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
PVT1-206ENST00000517838 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
PVT1-206ENST00000517838 MT3P25713 68 aa3.56□□□□□ -1.84
PVT1-206ENST00000517838 A0A0D9SG42 100 aa3.55□□□□□ -1.84
PVT1-206ENST00000517838 P0C880 135 aa3.53□□□□□ -1.84
PVT1-206ENST00000517838 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
PVT1-206ENST00000517838 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
PVT1-206ENST00000517838 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
PVT1-206ENST00000517838 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
PVT1-206ENST00000517838 M0QZ58 72 aa3.46□□□□□ -1.86
PVT1-206ENST00000517838 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
PVT1-206ENST00000517838 R4GN34 69 aa3.45□□□□□ -1.86
PVT1-206ENST00000517838 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
PVT1-206ENST00000517838 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
PVT1-206ENST00000517838 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
PVT1-206ENST00000517838 KMT2DO14686 5537 aa3.42□□□□□ -1.86
PVT1-206ENST00000517838 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms