RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 SPATA8Q6RVD6 105 aa1.69□□□□□ -2.14
SCARNA20.6-201ENST00000517251 HERC1Q15751 4861 aa1.69□□□□□ -2.14
SCARNA20.6-201ENST00000517251 A0A1B0GU69 56 aa1.68□□□□□ -2.14
SCARNA20.6-201ENST00000517251 RPL37P61927 97 aaKnown RBP1.68□□□□□ -2.14
SCARNA20.6-201ENST00000517251 PMAIP1Q13794 54 aa1.68□□□□□ -2.14
SCARNA20.6-201ENST00000517251 XP32Q5T750 250 aa1.68□□□□□ -2.14
SCARNA20.6-201ENST00000517251 KRTAP3-3Q9BYR6 98 aa1.68□□□□□ -2.14
SCARNA20.6-201ENST00000517251 COX6B2Q6YFQ2 88 aa1.67□□□□□ -2.14
SCARNA20.6-201ENST00000517251 KRTAP10-6P60371 365 aaPredicted RBP1.66□□□□□ -2.14
SCARNA20.6-201ENST00000517251 SPTSSBQ8NFR3 76 aa1.66□□□□□ -2.14
SCARNA20.6-201ENST00000517251 KRTAP3-2Q9BYR7 98 aa1.66□□□□□ -2.14
SCARNA20.6-201ENST00000517251 HMCN2Q8NDA2 5059 aa1.66□□□□□ -2.14
SCARNA20.6-201ENST00000517251 PCLOQ9Y6V0 5065 aa1.66□□□□□ -2.14
SCARNA20.6-201ENST00000517251 UQCR11O14957 56 aa1.65□□□□□ -2.15
SCARNA20.6-201ENST00000517251 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
SCARNA20.6-201ENST00000517251 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.15
SCARNA20.6-201ENST00000517251 ADM2Q7Z4H4 148 aa1.65□□□□□ -2.15
SCARNA20.6-201ENST00000517251 KRTAP4-5Q9BYR2 181 aa1.64□□□□□ -2.15
SCARNA20.6-201ENST00000517251 RBM12B-AS1Q9P1G2 102 aa1.64□□□□□ -2.15
SCARNA20.6-201ENST00000517251 TPRXLQ17RH7 258 aa1.63□□□□□ -2.15
SCARNA20.6-201ENST00000517251 KRTAP19-2Q3LHN2 52 aa1.63□□□□□ -2.15
SCARNA20.6-201ENST00000517251 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
SCARNA20.6-201ENST00000517251 PRAC1Q96KF2 57 aa1.63□□□□□ -2.15
SCARNA20.6-201ENST00000517251 P0C880 135 aa1.6□□□□□ -2.15
SCARNA20.6-201ENST00000517251 SEC61GP60059 68 aa1.6□□□□□ -2.15
SCARNA20.6-201ENST00000517251 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
SCARNA20.6-201ENST00000517251 S4R3F8 94 aa1.6□□□□□ -2.15
SCARNA20.6-201ENST00000517251 A0A1B0GU33 70 aa1.59□□□□□ -2.15
SCARNA20.6-201ENST00000517251 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
SCARNA20.6-201ENST00000517251 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
SCARNA20.6-201ENST00000517251 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
SCARNA20.6-201ENST00000517251 KRTAP12-2P59991 146 aa1.55□□□□□ -2.16
SCARNA20.6-201ENST00000517251 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
SCARNA20.6-201ENST00000517251 LINC01554Q52M75 96 aa1.54□□□□□ -2.16
SCARNA20.6-201ENST00000517251 LORP23490 312 aaPredicted RBP1.53□□□□□ -2.16
SCARNA20.6-201ENST00000517251 MUC2Q02817 5179 aa1.52□□□□□ -2.17
SCARNA20.6-201ENST00000517251 ROMO1P60602 79 aa1.52□□□□□ -2.17
SCARNA20.6-201ENST00000517251 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
SCARNA20.6-201ENST00000517251 A0A0D9SG42 100 aa1.51□□□□□ -2.17
SCARNA20.6-201ENST00000517251 LCE2CQ5TA81 110 aa1.5□□□□□ -2.17
SCARNA20.6-201ENST00000517251 UBR4Q5T4S7 5183 aa1.5□□□□□ -2.17
SCARNA20.6-201ENST00000517251 M0QZ58 72 aa1.49□□□□□ -2.17
SCARNA20.6-201ENST00000517251 SEC61BP60468 96 aaKnown RBP1.49□□□□□ -2.17
SCARNA20.6-201ENST00000517251 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
SCARNA20.6-201ENST00000517251 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
SCARNA20.6-201ENST00000517251 K7ERS5 55 aa1.46□□□□□ -2.18
SCARNA20.6-201ENST00000517251 KRTAP15-1Q3LI76 137 aa1.44□□□□□ -2.18
SCARNA20.6-201ENST00000517251 KRTAP19-1Q8IUB9 90 aa1.44□□□□□ -2.18
SCARNA20.6-201ENST00000517251 J3QL48 77 aa1.43□□□□□ -2.18
SCARNA20.6-201ENST00000517251 SPINT4Q6UDR6 99 aa1.43□□□□□ -2.18
SCARNA20.6-201ENST00000517251 R4GN34 69 aa1.43□□□□□ -2.18
SCARNA20.6-201ENST00000517251 MT1HP80294 61 aa1.42□□□□□ -2.18
SCARNA20.6-201ENST00000517251 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
SCARNA20.6-201ENST00000517251 MT2AP02795 61 aa1.41□□□□□ -2.18
SCARNA20.6-201ENST00000517251 MT1FP04733 61 aa1.41□□□□□ -2.18
SCARNA20.6-201ENST00000517251 KRTAP9-8Q9BYQ0 159 aa1.4□□□□□ -2.19
SCARNA20.6-201ENST00000517251 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
SCARNA20.6-201ENST00000517251 MT1BP07438 61 aa1.38□□□□□ -2.19
SCARNA20.6-201ENST00000517251 SPRR5A0A1B0GTR4 108 aa1.36□□□□□ -2.19
SCARNA20.6-201ENST00000517251 KRTAP23-1A1A580 65 aa1.35□□□□□ -2.19
SCARNA20.6-201ENST00000517251 MT1XP80297 61 aa1.35□□□□□ -2.19
SCARNA20.6-201ENST00000517251 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
SCARNA20.6-201ENST00000517251 H3BS24 57 aa1.34□□□□□ -2.19
SCARNA20.6-201ENST00000517251 KRTAP10-5P60370 271 aa1.34□□□□□ -2.19
SCARNA20.6-201ENST00000517251 PP632Q6XCG6 107 aa1.34□□□□□ -2.19
SCARNA20.6-201ENST00000517251 KRTAP9-3Q9BYQ3 159 aa1.34□□□□□ -2.19
SCARNA20.6-201ENST00000517251 LCE3AQ5TA76 89 aa1.33□□□□□ -2.2
SCARNA20.6-201ENST00000517251 CAMK2N1Q7Z7J9 78 aa1.33□□□□□ -2.2
SCARNA20.6-201ENST00000517251 NDUFAF8A1L188 74 aa1.32□□□□□ -2.2
SCARNA20.6-201ENST00000517251 LCE2AQ5TA79 106 aaPredicted RBP1.32□□□□□ -2.2
SCARNA20.6-201ENST00000517251 USH2AO75445 5202 aa1.31□□□□□ -2.2
SCARNA20.6-201ENST00000517251 TNP1P09430 55 aa1.31□□□□□ -2.2
SCARNA20.6-201ENST00000517251 LCE2BO14633 110 aa1.3□□□□□ -2.2
SCARNA20.6-201ENST00000517251 KRTAP10-10P60014 251 aa1.3□□□□□ -2.2
SCARNA20.6-201ENST00000517251 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
SCARNA20.6-201ENST00000517251 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
SCARNA20.6-201ENST00000517251 KRTAP10-7P60409 375 aaPredicted RBP1.29□□□□□ -2.2
SCARNA20.6-201ENST00000517251 M0R2T5 61 aa1.27□□□□□ -2.21
SCARNA20.6-201ENST00000517251 KRTAP10-12P60413 245 aa1.27□□□□□ -2.21
SCARNA20.6-201ENST00000517251 KMT2DO14686 5537 aa1.27□□□□□ -2.21
SCARNA20.6-201ENST00000517251 LCE2DQ5TA82 110 aaPredicted RBP1.25□□□□□ -2.21
SCARNA20.6-201ENST00000517251 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
SCARNA20.6-201ENST00000517251 KRTAP19-5Q3LI72 72 aa1.21□□□□□ -2.22
SCARNA20.6-201ENST00000517251 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
SCARNA20.6-201ENST00000517251 KRTAP4-8A0A0G2JLE6 195 aa1.19□□□□□ -2.22
SCARNA20.6-201ENST00000517251 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
SCARNA20.6-201ENST00000517251 KRTAP4-8Q9BYQ9 185 aa1.19□□□□□ -2.22
SCARNA20.6-201ENST00000517251 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
SCARNA20.6-201ENST00000517251 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
SCARNA20.6-201ENST00000517251 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
SCARNA20.6-201ENST00000517251 LUZP6Q538Z0 58 aa1.17□□□□□ -2.22
SCARNA20.6-201ENST00000517251 MT1EP04732 61 aa1.16□□□□□ -2.22
SCARNA20.6-201ENST00000517251 LCE3CQ5T5A8 94 aa1.16□□□□□ -2.22
SCARNA20.6-201ENST00000517251 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
SCARNA20.6-201ENST00000517251 MT1LQ93083 61 aa1.15□□□□□ -2.23
SCARNA20.6-201ENST00000517251 KRTAP4-7Q9BYR0 210 aa1.14□□□□□ -2.23
SCARNA20.6-201ENST00000517251 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
SCARNA20.6-201ENST00000517251 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
SCARNA20.6-201ENST00000517251 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
SCARNA20.6-201ENST00000517251 A0A0A0MQY5 61 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms