RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
SDHA-218ENST00000515752 LCA10Q71F78 164 aa7.88□□□□□ -1.15
SDHA-218ENST00000515752 UQCR11O14957 56 aa7.85□□□□□ -1.15
SDHA-218ENST00000515752 A8MU10 97 aa7.79□□□□□ -1.16
SDHA-218ENST00000515752 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
SDHA-218ENST00000515752 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
SDHA-218ENST00000515752 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
SDHA-218ENST00000515752 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
SDHA-218ENST00000515752 H1FX-AS1Q4G0G2 97 aa7.75□□□□□ -1.17
SDHA-218ENST00000515752 S4R3F8 94 aa7.75□□□□□ -1.17
SDHA-218ENST00000515752 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
SDHA-218ENST00000515752 H3BS24 57 aa7.68□□□□□ -1.18
SDHA-218ENST00000515752 A0A1B0GU33 70 aa7.68□□□□□ -1.18
SDHA-218ENST00000515752 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
SDHA-218ENST00000515752 HERC2O95714 4834 aa7.66□□□□□ -1.18
SDHA-218ENST00000515752 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.19
SDHA-218ENST00000515752 LRP2P98164 4655 aa7.65□□□□□ -1.19
SDHA-218ENST00000515752 A6NN06 94 aa7.61□□□□□ -1.19
SDHA-218ENST00000515752 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
SDHA-218ENST00000515752 LPAP08519 4548 aa7.58□□□□□ -1.2
SDHA-218ENST00000515752 H0YAA0 97 aa7.55□□□□□ -1.2
SDHA-218ENST00000515752 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.2
SDHA-218ENST00000515752 LCE2BO14633 110 aa7.52□□□□□ -1.21
SDHA-218ENST00000515752 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
SDHA-218ENST00000515752 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
SDHA-218ENST00000515752 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
SDHA-218ENST00000515752 K7ERS5 55 aa7.43□□□□□ -1.22
SDHA-218ENST00000515752 P0C880 135 aa7.4□□□□□ -1.23
SDHA-218ENST00000515752 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
SDHA-218ENST00000515752 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
SDHA-218ENST00000515752 M0QZ58 72 aa7.34□□□□□ -1.23
SDHA-218ENST00000515752 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
SDHA-218ENST00000515752 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
SDHA-218ENST00000515752 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
SDHA-218ENST00000515752 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
SDHA-218ENST00000515752 A0A0D9SG42 100 aa7.25□□□□□ -1.25
SDHA-218ENST00000515752 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
SDHA-218ENST00000515752 HERC1Q15751 4861 aa7.19□□□□□ -1.26
SDHA-218ENST00000515752 R4GN34 69 aa7.18□□□□□ -1.26
SDHA-218ENST00000515752 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
SDHA-218ENST00000515752 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
SDHA-218ENST00000515752 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
SDHA-218ENST00000515752 ROMO1P60602 79 aa7.11□□□□□ -1.27
SDHA-218ENST00000515752 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
SDHA-218ENST00000515752 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
SDHA-218ENST00000515752 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
SDHA-218ENST00000515752 MUC2Q02817 5179 aa7.05□□□□□ -1.28
SDHA-218ENST00000515752 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SDHA-218ENST00000515752 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
SDHA-218ENST00000515752 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
SDHA-218ENST00000515752 M0R2T5 61 aa6.91□□□□□ -1.3
SDHA-218ENST00000515752 MT1HP80294 61 aa6.89□□□□□ -1.31
SDHA-218ENST00000515752 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
SDHA-218ENST00000515752 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
SDHA-218ENST00000515752 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
SDHA-218ENST00000515752 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
SDHA-218ENST00000515752 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
SDHA-218ENST00000515752 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
SDHA-218ENST00000515752 MT2AP02795 61 aa6.69□□□□□ -1.34
SDHA-218ENST00000515752 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
SDHA-218ENST00000515752 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
SDHA-218ENST00000515752 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
SDHA-218ENST00000515752 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
SDHA-218ENST00000515752 MT1FP04733 61 aa6.64□□□□□ -1.35
SDHA-218ENST00000515752 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
SDHA-218ENST00000515752 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
SDHA-218ENST00000515752 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
SDHA-218ENST00000515752 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
SDHA-218ENST00000515752 TNP1P09430 55 aa6.5□□□□□ -1.37
SDHA-218ENST00000515752 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
SDHA-218ENST00000515752 MT1BP07438 61 aa6.36□□□□□ -1.39
SDHA-218ENST00000515752 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
SDHA-218ENST00000515752 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
SDHA-218ENST00000515752 MT1XP80297 61 aa6.23□□□□□ -1.41
SDHA-218ENST00000515752 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
SDHA-218ENST00000515752 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
SDHA-218ENST00000515752 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
SDHA-218ENST00000515752 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
SDHA-218ENST00000515752 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
SDHA-218ENST00000515752 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
SDHA-218ENST00000515752 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
SDHA-218ENST00000515752 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
SDHA-218ENST00000515752 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
SDHA-218ENST00000515752 USH2AO75445 5202 aa5.84□□□□□ -1.47
SDHA-218ENST00000515752 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
SDHA-218ENST00000515752 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
SDHA-218ENST00000515752 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
SDHA-218ENST00000515752 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
SDHA-218ENST00000515752 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
SDHA-218ENST00000515752 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
SDHA-218ENST00000515752 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
SDHA-218ENST00000515752 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
SDHA-218ENST00000515752 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
SDHA-218ENST00000515752 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
SDHA-218ENST00000515752 KMT2DO14686 5537 aa5.48□□□□□ -1.53
SDHA-218ENST00000515752 MT1EP04732 61 aa5.45□□□□□ -1.54
SDHA-218ENST00000515752 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
SDHA-218ENST00000515752 MT1LQ93083 61 aa5.39□□□□□ -1.55
SDHA-218ENST00000515752 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
SDHA-218ENST00000515752 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms