RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 HRES1P13985 223 aa10.74□□□□□ -0.69
TRIO-223ENST00000515710 SPINK7P58062 85 aa10.64□□□□□ -0.71
TRIO-223ENST00000515710 DMAC1Q96GE9 116 aa10.59□□□□□ -0.71
TRIO-223ENST00000515710 ACYP2P14621 99 aa10.58□□□□□ -0.72
TRIO-223ENST00000515710 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
TRIO-223ENST00000515710 LPAP08519 4548 aa10.42□□□□□ -0.74
TRIO-223ENST00000515710 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
TRIO-223ENST00000515710 SPATA8Q6RVD6 105 aa10.37□□□□□ -0.75
TRIO-223ENST00000515710 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
TRIO-223ENST00000515710 LRP2P98164 4655 aa10.37□□□□□ -0.75
TRIO-223ENST00000515710 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
TRIO-223ENST00000515710 LINC01554Q52M75 96 aa10.27□□□□□ -0.76
TRIO-223ENST00000515710 A0A1B0GU69 56 aa10.27□□□□□ -0.77
TRIO-223ENST00000515710 PRAC1Q96KF2 57 aa10.23□□□□□ -0.77
TRIO-223ENST00000515710 UQCR11O14957 56 aa10.21□□□□□ -0.77
TRIO-223ENST00000515710 MIR22HGQ0VDD5 57 aa10.19□□□□□ -0.78
TRIO-223ENST00000515710 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
TRIO-223ENST00000515710 ADM2Q7Z4H4 148 aa10.14□□□□□ -0.79
TRIO-223ENST00000515710 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
TRIO-223ENST00000515710 KRTAP4-1Q9BYQ7 146 aa10.13□□□□□ -0.79
TRIO-223ENST00000515710 HERC1Q15751 4861 aa10.11□□□□□ -0.79
TRIO-223ENST00000515710 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
TRIO-223ENST00000515710 S4R3F8 94 aa10.06□□□□□ -0.8
TRIO-223ENST00000515710 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
TRIO-223ENST00000515710 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
TRIO-223ENST00000515710 KRTAP19-2Q3LHN2 52 aa9.89□□□□□ -0.83
TRIO-223ENST00000515710 H3BS24 57 aa9.86□□□□□ -0.83
TRIO-223ENST00000515710 KRTAP25-1Q3LHN0 102 aa9.74□□□□□ -0.85
TRIO-223ENST00000515710 H0YAA0 97 aa9.7□□□□□ -0.86
TRIO-223ENST00000515710 A0A1B0GU33 70 aa9.66□□□□□ -0.86
TRIO-223ENST00000515710 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
TRIO-223ENST00000515710 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
TRIO-223ENST00000515710 MUC2Q02817 5179 aa9.64□□□□□ -0.87
TRIO-223ENST00000515710 ROMO1P60602 79 aa9.62□□□□□ -0.87
TRIO-223ENST00000515710 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
TRIO-223ENST00000515710 P0C880 135 aa9.56□□□□□ -0.88
TRIO-223ENST00000515710 RNF213Q63HN8 5207 aa9.52□□□□□ -0.89
TRIO-223ENST00000515710 UBR4Q5T4S7 5183 aa9.52□□□□□ -0.89
TRIO-223ENST00000515710 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
TRIO-223ENST00000515710 K7ERS5 55 aa9.48□□□□□ -0.89
TRIO-223ENST00000515710 MT1HP80294 61 aa9.42□□□□□ -0.9
TRIO-223ENST00000515710 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
TRIO-223ENST00000515710 M0QZ58 72 aa9.39□□□□□ -0.91
TRIO-223ENST00000515710 M0R2T5 61 aa9.36□□□□□ -0.91
TRIO-223ENST00000515710 R4GN34 69 aa9.28□□□□□ -0.92
TRIO-223ENST00000515710 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
TRIO-223ENST00000515710 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
TRIO-223ENST00000515710 A0A0D9SG42 100 aa9.23□□□□□ -0.93
TRIO-223ENST00000515710 CRIPTQ9P021 101 aa9.21□□□□□ -0.93
TRIO-223ENST00000515710 KRTAP9-8Q9BYQ0 159 aa9.09□□□□□ -0.95
TRIO-223ENST00000515710 MT2AP02795 61 aa9.07□□□□□ -0.96
TRIO-223ENST00000515710 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
TRIO-223ENST00000515710 SPINT4Q6UDR6 99 aa9.03□□□□□ -0.96
TRIO-223ENST00000515710 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
TRIO-223ENST00000515710 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
TRIO-223ENST00000515710 KRTAP15-1Q3LI76 137 aa9.01□□□□□ -0.97
TRIO-223ENST00000515710 MT1FP04733 61 aa9.01□□□□□ -0.97
TRIO-223ENST00000515710 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
TRIO-223ENST00000515710 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.97
TRIO-223ENST00000515710 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
TRIO-223ENST00000515710 NDUFAF8A1L188 74 aa8.81□□□□□ -1
TRIO-223ENST00000515710 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
TRIO-223ENST00000515710 KRTAP9-3Q9BYQ3 159 aa8.76□□□□□ -1.01
TRIO-223ENST00000515710 KRTAP19-8Q3LI54 63 aa8.71□□□□□ -1.02
TRIO-223ENST00000515710 PLAC4Q8WY50 150 aa8.71□□□□□ -1.02
TRIO-223ENST00000515710 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
TRIO-223ENST00000515710 MT1BP07438 61 aa8.56□□□□□ -1.04
TRIO-223ENST00000515710 LCE2BO14633 110 aa8.48□□□□□ -1.05
TRIO-223ENST00000515710 TNP1P09430 55 aa8.32□□□□□ -1.08
TRIO-223ENST00000515710 KRTAP10-5P60370 271 aa8.3□□□□□ -1.08
TRIO-223ENST00000515710 MT1XP80297 61 aa8.3□□□□□ -1.08
TRIO-223ENST00000515710 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
TRIO-223ENST00000515710 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
TRIO-223ENST00000515710 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
TRIO-223ENST00000515710 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
TRIO-223ENST00000515710 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
TRIO-223ENST00000515710 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
TRIO-223ENST00000515710 USH2AO75445 5202 aa8.1□□□□□ -1.11
TRIO-223ENST00000515710 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
TRIO-223ENST00000515710 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
TRIO-223ENST00000515710 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
TRIO-223ENST00000515710 LCE3AQ5TA76 89 aa7.91□□□□□ -1.14
TRIO-223ENST00000515710 SPRR5A0A1B0GTR4 108 aa7.88□□□□□ -1.15
TRIO-223ENST00000515710 SSPOA2VEC9 5147 aa7.84□□□□□ -1.15
TRIO-223ENST00000515710 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
TRIO-223ENST00000515710 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
TRIO-223ENST00000515710 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
TRIO-223ENST00000515710 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
TRIO-223ENST00000515710 FSIP2Q5CZC0 6907 aa7.61□□□□□ -1.19
TRIO-223ENST00000515710 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
TRIO-223ENST00000515710 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.2
TRIO-223ENST00000515710 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
TRIO-223ENST00000515710 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
TRIO-223ENST00000515710 KMT2DO14686 5537 aa7.44□□□□□ -1.22
TRIO-223ENST00000515710 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
TRIO-223ENST00000515710 INE1O15225 51 aa7.35□□□□□ -1.23
TRIO-223ENST00000515710 MT1EP04732 61 aa7.28□□□□□ -1.24
TRIO-223ENST00000515710 KRTAP19-4Q3LI73 84 aa7.19□□□□□ -1.26
TRIO-223ENST00000515710 MT1LQ93083 61 aa7.15□□□□□ -1.27
TRIO-223ENST00000515710 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms