RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
SSBP2-218ENST00000514493 Q1T7F1 81 aa9.83□□□□□ -0.84
SSBP2-218ENST00000514493 V9GYY9 64 aa9.8□□□□□ -0.84
SSBP2-218ENST00000514493 SPTSSBQ8NFR3 76 aa9.79□□□□□ -0.84
SSBP2-218ENST00000514493 S4R3F8 94 aa9.76□□□□□ -0.85
SSBP2-218ENST00000514493 LCA10Q71F78 164 aa9.74□□□□□ -0.85
SSBP2-218ENST00000514493 LINC01558Q9Y6Z2 57 aa9.73□□□□□ -0.85
SSBP2-218ENST00000514493 FLGP20930 4061 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-218ENST00000514493 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
SSBP2-218ENST00000514493 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
SSBP2-218ENST00000514493 PRR15LQ9BU68 103 aa9.65□□□□□ -0.86
SSBP2-218ENST00000514493 PSPHP1O15172 72 aa9.65□□□□□ -0.87
SSBP2-218ENST00000514493 A0A1B0GU69 56 aa9.59□□□□□ -0.87
SSBP2-218ENST00000514493 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
SSBP2-218ENST00000514493 Q5VV11 94 aa9.57□□□□□ -0.88
SSBP2-218ENST00000514493 SEC61GP60059 68 aa9.53□□□□□ -0.88
SSBP2-218ENST00000514493 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
SSBP2-218ENST00000514493 MT1HP80294 61 aa9.51□□□□□ -0.89
SSBP2-218ENST00000514493 M0R2T5 61 aa9.38□□□□□ -0.91
SSBP2-218ENST00000514493 A6NED7 52 aa9.36□□□□□ -0.91
SSBP2-218ENST00000514493 H0YAA0 97 aa9.35□□□□□ -0.91
SSBP2-218ENST00000514493 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
SSBP2-218ENST00000514493 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-218ENST00000514493 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
SSBP2-218ENST00000514493 UQCR11O14957 56 aa9.3□□□□□ -0.92
SSBP2-218ENST00000514493 A0A1B0GU33 70 aa9.29□□□□□ -0.92
SSBP2-218ENST00000514493 P0C880 135 aa9.27□□□□□ -0.93
SSBP2-218ENST00000514493 BRK1Q8WUW1 75 aa9.27□□□□□ -0.93
SSBP2-218ENST00000514493 CDC42SE1Q9NRR8 79 aa9.21□□□□□ -0.94
SSBP2-218ENST00000514493 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
SSBP2-218ENST00000514493 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
SSBP2-218ENST00000514493 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
SSBP2-218ENST00000514493 A8MU10 97 aa9.14□□□□□ -0.95
SSBP2-218ENST00000514493 KRTAP9-8Q9BYQ0 159 aa9.12□□□□□ -0.95
SSBP2-218ENST00000514493 MT2AP02795 61 aa9.09□□□□□ -0.95
SSBP2-218ENST00000514493 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
SSBP2-218ENST00000514493 PRO0628Q9UI54 55 aa9.07□□□□□ -0.96
SSBP2-218ENST00000514493 M0QZ58 72 aa9.04□□□□□ -0.96
SSBP2-218ENST00000514493 MT1FP04733 61 aa9.04□□□□□ -0.96
SSBP2-218ENST00000514493 R4GN34 69 aa9□□□□□ -0.97
SSBP2-218ENST00000514493 KRTAP10-10P60014 251 aa8.99□□□□□ -0.97
SSBP2-218ENST00000514493 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
SSBP2-218ENST00000514493 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
SSBP2-218ENST00000514493 A0A0D9SG42 100 aa8.91□□□□□ -0.98
SSBP2-218ENST00000514493 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-218ENST00000514493 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
SSBP2-218ENST00000514493 LINC01554Q52M75 96 aa8.82□□□□□ -1
SSBP2-218ENST00000514493 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
SSBP2-218ENST00000514493 KRTAP9-3Q9BYQ3 159 aa8.81□□□□□ -1
SSBP2-218ENST00000514493 K7ERS5 55 aa8.78□□□□□ -1
SSBP2-218ENST00000514493 FSIP2Q5CZC0 6907 aa8.77□□□□□ -1.01
SSBP2-218ENST00000514493 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
SSBP2-218ENST00000514493 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
SSBP2-218ENST00000514493 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
SSBP2-218ENST00000514493 A6NN06 94 aa8.71□□□□□ -1.02
SSBP2-218ENST00000514493 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
SSBP2-218ENST00000514493 USH2AO75445 5202 aa8.66□□□□□ -1.02
SSBP2-218ENST00000514493 LCE2BO14633 110 aa8.63□□□□□ -1.03
SSBP2-218ENST00000514493 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
SSBP2-218ENST00000514493 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
SSBP2-218ENST00000514493 MT1BP07438 61 aa8.52□□□□□ -1.05
SSBP2-218ENST00000514493 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
SSBP2-218ENST00000514493 SSPOA2VEC9 5147 aa8.51□□□□□ -1.05
SSBP2-218ENST00000514493 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
SSBP2-218ENST00000514493 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
SSBP2-218ENST00000514493 ROMO1P60602 79 aa8.42□□□□□ -1.06
SSBP2-218ENST00000514493 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.06
SSBP2-218ENST00000514493 SVIPQ8NHG7 77 aa8.28□□□□□ -1.08
SSBP2-218ENST00000514493 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
SSBP2-218ENST00000514493 FCGBPQ9Y6R7 5405 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-218ENST00000514493 MT1XP80297 61 aa8.2□□□□□ -1.1
SSBP2-218ENST00000514493 KRTAP19-6Q3LI70 58 aa8.19□□□□□ -1.1
SSBP2-218ENST00000514493 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
SSBP2-218ENST00000514493 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
SSBP2-218ENST00000514493 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
SSBP2-218ENST00000514493 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
SSBP2-218ENST00000514493 TNP1P09430 55 aa8.02□□□□□ -1.13
SSBP2-218ENST00000514493 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
SSBP2-218ENST00000514493 MACF1Q9UPN3 7388 aaKnown RBP7.88□□□□□ -1.15
SSBP2-218ENST00000514493 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-218ENST00000514493 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
SSBP2-218ENST00000514493 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
SSBP2-218ENST00000514493 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
SSBP2-218ENST00000514493 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
SSBP2-218ENST00000514493 KRTAP9-7A8MTY7 169 aa7.71□□□□□ -1.18
SSBP2-218ENST00000514493 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
SSBP2-218ENST00000514493 KMT2DO14686 5537 aa7.63□□□□□ -1.19
SSBP2-218ENST00000514493 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
SSBP2-218ENST00000514493 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
SSBP2-218ENST00000514493 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
SSBP2-218ENST00000514493 KRTAP6-3Q3LI67 103 aa7.51□□□□□ -1.21
SSBP2-218ENST00000514493 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
SSBP2-218ENST00000514493 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
SSBP2-218ENST00000514493 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
SSBP2-218ENST00000514493 KRTAP5-9P26371 169 aa7.33□□□□□ -1.24
SSBP2-218ENST00000514493 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
SSBP2-218ENST00000514493 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
SSBP2-218ENST00000514493 SPRR2FQ96RM1 72 aa7.23□□□□□ -1.25
SSBP2-218ENST00000514493 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
SSBP2-218ENST00000514493 MT1EP04732 61 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms