RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
TPM3-221ENST00000513769 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
TPM3-221ENST00000513769 CYP4F30PQ9H0H9 118 aa5.35□□□□□ -1.55
TPM3-221ENST00000513769 PRR4Q16378 134 aa5.34□□□□□ -1.55
TPM3-221ENST00000513769 TNXBP22105 4242 aa5.34□□□□□ -1.56
TPM3-221ENST00000513769 ATP11AUNQ6ZP68 121 aa5.33□□□□□ -1.56
TPM3-221ENST00000513769 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
TPM3-221ENST00000513769 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
TPM3-221ENST00000513769 CYSTM1Q9H1C7 97 aa5.32□□□□□ -1.56
TPM3-221ENST00000513769 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
TPM3-221ENST00000513769 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
TPM3-221ENST00000513769 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TPM3-221ENST00000513769 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
TPM3-221ENST00000513769 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
TPM3-221ENST00000513769 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
TPM3-221ENST00000513769 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
TPM3-221ENST00000513769 LRP2P98164 4655 aa5.24□□□□□ -1.57
TPM3-221ENST00000513769 SPINK7P58062 85 aa5.23□□□□□ -1.57
TPM3-221ENST00000513769 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
TPM3-221ENST00000513769 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
TPM3-221ENST00000513769 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
TPM3-221ENST00000513769 HRES1P13985 223 aa5.22□□□□□ -1.57
TPM3-221ENST00000513769 ACYP2P14621 99 aa5.22□□□□□ -1.57
TPM3-221ENST00000513769 A8MUN3 132 aa5.21□□□□□ -1.58
TPM3-221ENST00000513769 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
TPM3-221ENST00000513769 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
TPM3-221ENST00000513769 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
TPM3-221ENST00000513769 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
TPM3-221ENST00000513769 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
TPM3-221ENST00000513769 COA5Q86WW8 74 aa5.08□□□□□ -1.6
TPM3-221ENST00000513769 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
TPM3-221ENST00000513769 V9GYY9 64 aa5.07□□□□□ -1.6
TPM3-221ENST00000513769 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
TPM3-221ENST00000513769 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
TPM3-221ENST00000513769 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
TPM3-221ENST00000513769 LPAP08519 4548 aa5.05□□□□□ -1.6
TPM3-221ENST00000513769 Q1T7F1 81 aa5.03□□□□□ -1.6
TPM3-221ENST00000513769 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
TPM3-221ENST00000513769 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
TPM3-221ENST00000513769 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
TPM3-221ENST00000513769 MUC2Q02817 5179 aa4.97□□□□□ -1.61
TPM3-221ENST00000513769 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
TPM3-221ENST00000513769 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
TPM3-221ENST00000513769 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
TPM3-221ENST00000513769 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
TPM3-221ENST00000513769 S4R3F8 94 aa4.91□□□□□ -1.62
TPM3-221ENST00000513769 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
TPM3-221ENST00000513769 LCA10Q71F78 164 aa4.88□□□□□ -1.63
TPM3-221ENST00000513769 A0A1B0GU69 56 aa4.86□□□□□ -1.63
TPM3-221ENST00000513769 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
TPM3-221ENST00000513769 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
TPM3-221ENST00000513769 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
TPM3-221ENST00000513769 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
TPM3-221ENST00000513769 H0YAA0 97 aa4.81□□□□□ -1.64
TPM3-221ENST00000513769 PSPHP1O15172 72 aa4.81□□□□□ -1.64
TPM3-221ENST00000513769 Q5VV11 94 aa4.8□□□□□ -1.64
TPM3-221ENST00000513769 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
TPM3-221ENST00000513769 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
TPM3-221ENST00000513769 UQCR11O14957 56 aa4.76□□□□□ -1.65
TPM3-221ENST00000513769 A0A1B0GU33 70 aa4.73□□□□□ -1.65
TPM3-221ENST00000513769 A6NED7 52 aa4.71□□□□□ -1.66
TPM3-221ENST00000513769 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
TPM3-221ENST00000513769 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
TPM3-221ENST00000513769 M0QZ58 72 aa4.68□□□□□ -1.66
TPM3-221ENST00000513769 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
TPM3-221ENST00000513769 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
TPM3-221ENST00000513769 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
TPM3-221ENST00000513769 MIR22HGQ0VDD5 57 aa4.66□□□□□ -1.66
TPM3-221ENST00000513769 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
TPM3-221ENST00000513769 MT1HP80294 61 aa4.63□□□□□ -1.67
TPM3-221ENST00000513769 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
TPM3-221ENST00000513769 M0R2T5 61 aa4.62□□□□□ -1.67
TPM3-221ENST00000513769 P0C880 135 aa4.62□□□□□ -1.67
TPM3-221ENST00000513769 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
TPM3-221ENST00000513769 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
TPM3-221ENST00000513769 MT3P25713 68 aa4.6□□□□□ -1.67
TPM3-221ENST00000513769 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
TPM3-221ENST00000513769 R4GN34 69 aa4.56□□□□□ -1.68
TPM3-221ENST00000513769 K7ERS5 55 aa4.53□□□□□ -1.68
TPM3-221ENST00000513769 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
TPM3-221ENST00000513769 A6NN06 94 aa4.49□□□□□ -1.69
TPM3-221ENST00000513769 A8MU10 97 aa4.46□□□□□ -1.7
TPM3-221ENST00000513769 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
TPM3-221ENST00000513769 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
TPM3-221ENST00000513769 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
TPM3-221ENST00000513769 MT2AP02795 61 aa4.44□□□□□ -1.7
TPM3-221ENST00000513769 A0A0D9SG42 100 aa4.42□□□□□ -1.7
TPM3-221ENST00000513769 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
TPM3-221ENST00000513769 MT1FP04733 61 aa4.39□□□□□ -1.71
TPM3-221ENST00000513769 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
TPM3-221ENST00000513769 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
TPM3-221ENST00000513769 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
TPM3-221ENST00000513769 PLAC4Q8WY50 150 aa4.33□□□□□ -1.72
TPM3-221ENST00000513769 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
TPM3-221ENST00000513769 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
TPM3-221ENST00000513769 ROMO1P60602 79 aa4.27□□□□□ -1.73
TPM3-221ENST00000513769 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
TPM3-221ENST00000513769 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
TPM3-221ENST00000513769 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
TPM3-221ENST00000513769 USH2AO75445 5202 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms