RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
DDX41-216ENST00000513562 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
DDX41-216ENST00000513562 MMP24-AS1A0A0U1RRL7 71 aa4.72□□□□□ -1.65
DDX41-216ENST00000513562 SPRR2DP22532 72 aa4.72□□□□□ -1.65
DDX41-216ENST00000513562 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
DDX41-216ENST00000513562 K7ERU9 68 aa4.71□□□□□ -1.66
DDX41-216ENST00000513562 BPY2O14599 106 aa4.71□□□□□ -1.66
DDX41-216ENST00000513562 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
DDX41-216ENST00000513562 S4R3F8 94 aa4.7□□□□□ -1.66
DDX41-216ENST00000513562 Q5W150 140 aa4.69□□□□□ -1.66
DDX41-216ENST00000513562 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
DDX41-216ENST00000513562 NDUFS5O43920 106 aa4.68□□□□□ -1.66
DDX41-216ENST00000513562 hDV103S1A0JD37 113 aa4.67□□□□□ -1.66
DDX41-216ENST00000513562 ATP5EP2Q5VTU8 51 aa4.67□□□□□ -1.66
DDX41-216ENST00000513562 LCA10Q71F78 164 aa4.67□□□□□ -1.66
DDX41-216ENST00000513562 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
DDX41-216ENST00000513562 CXCL6P80162 114 aa4.65□□□□□ -1.67
DDX41-216ENST00000513562 LINC00643Q86TS7 51 aa4.65□□□□□ -1.67
DDX41-216ENST00000513562 K7EQZ3 153 aa4.64□□□□□ -1.67
DDX41-216ENST00000513562 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
DDX41-216ENST00000513562 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
DDX41-216ENST00000513562 Q8N9L7 120 aa4.61□□□□□ -1.67
DDX41-216ENST00000513562 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
DDX41-216ENST00000513562 HIST1H4AP62805 103 aaKnown RBP4.6□□□□□ -1.67
DDX41-216ENST00000513562 MT1XP80297 61 aa4.6□□□□□ -1.67
DDX41-216ENST00000513562 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
DDX41-216ENST00000513562 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
DDX41-216ENST00000513562 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
DDX41-216ENST00000513562 C1orf64Q8NEQ6 169 aa4.57□□□□□ -1.68
DDX41-216ENST00000513562 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
DDX41-216ENST00000513562 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
DDX41-216ENST00000513562 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
DDX41-216ENST00000513562 A0A087WVE0 104 aa4.52□□□□□ -1.69
DDX41-216ENST00000513562 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
DDX41-216ENST00000513562 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
DDX41-216ENST00000513562 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
DDX41-216ENST00000513562 A8MUN3 132 aa4.45□□□□□ -1.7
DDX41-216ENST00000513562 H0YAA0 97 aa4.44□□□□□ -1.7
DDX41-216ENST00000513562 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
DDX41-216ENST00000513562 UQCRQO14949 82 aa4.43□□□□□ -1.7
DDX41-216ENST00000513562 TRAV22A0A0B4J277 110 aa4.42□□□□□ -1.7
DDX41-216ENST00000513562 SMIM20Q8N5G0 67 aa4.42□□□□□ -1.7
DDX41-216ENST00000513562 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
DDX41-216ENST00000513562 ATOX1O00244 68 aa4.41□□□□□ -1.7
DDX41-216ENST00000513562 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
DDX41-216ENST00000513562 H0Y9P7 68 aa4.39□□□□□ -1.71
DDX41-216ENST00000513562 MP68P56378 58 aa4.39□□□□□ -1.71
DDX41-216ENST00000513562 TRAV7A0A075B6U4 112 aa4.37□□□□□ -1.71
DDX41-216ENST00000513562 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
DDX41-216ENST00000513562 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
DDX41-216ENST00000513562 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
DDX41-216ENST00000513562 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
DDX41-216ENST00000513562 H3BPC8 53 aa4.34□□□□□ -1.71
DDX41-216ENST00000513562 NDUFC1O43677 76 aa4.33□□□□□ -1.72
DDX41-216ENST00000513562 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
DDX41-216ENST00000513562 LINC00208Q96KT6 92 aa4.33□□□□□ -1.72
DDX41-216ENST00000513562 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
DDX41-216ENST00000513562 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
DDX41-216ENST00000513562 COX7CP15954 63 aa4.28□□□□□ -1.72
DDX41-216ENST00000513562 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
DDX41-216ENST00000513562 R4GN34 69 aa4.28□□□□□ -1.72
DDX41-216ENST00000513562 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
DDX41-216ENST00000513562 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
DDX41-216ENST00000513562 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
DDX41-216ENST00000513562 M0QZ58 72 aa4.23□□□□□ -1.73
DDX41-216ENST00000513562 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
DDX41-216ENST00000513562 PCP4P48539 62 aa4.22□□□□□ -1.73
DDX41-216ENST00000513562 P0C880 135 aa4.21□□□□□ -1.74
DDX41-216ENST00000513562 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
DDX41-216ENST00000513562 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
DDX41-216ENST00000513562 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
DDX41-216ENST00000513562 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
DDX41-216ENST00000513562 MT4P47944 62 aa4.16□□□□□ -1.74
DDX41-216ENST00000513562 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
DDX41-216ENST00000513562 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
DDX41-216ENST00000513562 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
DDX41-216ENST00000513562 DMAC1Q96GE9 116 aa4.15□□□□□ -1.75
DDX41-216ENST00000513562 H7BZZ5 65 aa4.13□□□□□ -1.75
DDX41-216ENST00000513562 ACYP2P14621 99 aa4.12□□□□□ -1.75
DDX41-216ENST00000513562 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
DDX41-216ENST00000513562 CYSTM1Q9H1C7 97 aa4.12□□□□□ -1.75
DDX41-216ENST00000513562 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
DDX41-216ENST00000513562 MT1EP04732 61 aa4.11□□□□□ -1.75
DDX41-216ENST00000513562 CHKB-CPT1BH3BT56 60 aa4.09□□□□□ -1.75
DDX41-216ENST00000513562 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
DDX41-216ENST00000513562 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
DDX41-216ENST00000513562 TMEM258P61165 79 aa4.07□□□□□ -1.76
DDX41-216ENST00000513562 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
DDX41-216ENST00000513562 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
DDX41-216ENST00000513562 COA5Q86WW8 74 aa4.03□□□□□ -1.76
DDX41-216ENST00000513562 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
DDX41-216ENST00000513562 MT1GP13640 62 aa4□□□□□ -1.77
DDX41-216ENST00000513562 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
DDX41-216ENST00000513562 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
DDX41-216ENST00000513562 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
DDX41-216ENST00000513562 MT1MQ8N339 61 aa3.94□□□□□ -1.78
DDX41-216ENST00000513562 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
DDX41-216ENST00000513562 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
DDX41-216ENST00000513562 SEC61GP60059 68 aa3.9□□□□□ -1.79
DDX41-216ENST00000513562 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms