RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 C5orf47Q569G3 176 aa4.3□□□□□ -1.72
TCOF1-212ENST00000513538 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
TCOF1-212ENST00000513538 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
TCOF1-212ENST00000513538 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
TCOF1-212ENST00000513538 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
TCOF1-212ENST00000513538 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
TCOF1-212ENST00000513538 GTF2H5Q6ZYL4 71 aa4.28□□□□□ -1.72
TCOF1-212ENST00000513538 F8W1H4 67 aa4.27□□□□□ -1.73
TCOF1-212ENST00000513538 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
TCOF1-212ENST00000513538 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
TCOF1-212ENST00000513538 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TCOF1-212ENST00000513538 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
TCOF1-212ENST00000513538 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
TCOF1-212ENST00000513538 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
TCOF1-212ENST00000513538 LCA10Q71F78 164 aa4.21□□□□□ -1.74
TCOF1-212ENST00000513538 S4R3F8 94 aa4.21□□□□□ -1.74
TCOF1-212ENST00000513538 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
TCOF1-212ENST00000513538 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
TCOF1-212ENST00000513538 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
TCOF1-212ENST00000513538 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
TCOF1-212ENST00000513538 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
TCOF1-212ENST00000513538 ACYP1P07311 99 aa4.17□□□□□ -1.74
TCOF1-212ENST00000513538 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
TCOF1-212ENST00000513538 SPRR2EP22531 72 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 SPRR2BP35325 72 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 SPRR2AP35326 72 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
TCOF1-212ENST00000513538 FAM240AA0A1B0GVK7 77 aa4.14□□□□□ -1.75
TCOF1-212ENST00000513538 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
TCOF1-212ENST00000513538 A0A087WVE0 104 aa4.13□□□□□ -1.75
TCOF1-212ENST00000513538 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
TCOF1-212ENST00000513538 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
TCOF1-212ENST00000513538 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
TCOF1-212ENST00000513538 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
TCOF1-212ENST00000513538 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
TCOF1-212ENST00000513538 ATOX1O00244 68 aa4.09□□□□□ -1.75
TCOF1-212ENST00000513538 UQCRQO14949 82 aa4.09□□□□□ -1.75
TCOF1-212ENST00000513538 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
TCOF1-212ENST00000513538 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
TCOF1-212ENST00000513538 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
TCOF1-212ENST00000513538 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
TCOF1-212ENST00000513538 MT1XP80297 61 aa4.08□□□□□ -1.76
TCOF1-212ENST00000513538 H0Y9P7 68 aa4.05□□□□□ -1.76
TCOF1-212ENST00000513538 NDUFC1O43677 76 aa4.05□□□□□ -1.76
TCOF1-212ENST00000513538 LINC00643Q86TS7 51 aa4.05□□□□□ -1.76
TCOF1-212ENST00000513538 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
TCOF1-212ENST00000513538 A8MUN3 132 aa4.03□□□□□ -1.76
TCOF1-212ENST00000513538 H0YAA0 97 aa4.03□□□□□ -1.76
TCOF1-212ENST00000513538 SPRR2DP22532 72 aa4.02□□□□□ -1.77
TCOF1-212ENST00000513538 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
TCOF1-212ENST00000513538 A0A1B0GV90 55 aa4.01□□□□□ -1.77
TCOF1-212ENST00000513538 MP68P56378 58 aa4.01□□□□□ -1.77
TCOF1-212ENST00000513538 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
TCOF1-212ENST00000513538 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
TCOF1-212ENST00000513538 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
TCOF1-212ENST00000513538 J3QR89 54 aa3.96□□□□□ -1.78
TCOF1-212ENST00000513538 PCP4P48539 62 aa3.94□□□□□ -1.78
TCOF1-212ENST00000513538 H3BPC8 53 aa3.93□□□□□ -1.78
TCOF1-212ENST00000513538 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
TCOF1-212ENST00000513538 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
TCOF1-212ENST00000513538 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
TCOF1-212ENST00000513538 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
TCOF1-212ENST00000513538 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-212ENST00000513538 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
TCOF1-212ENST00000513538 P0C880 135 aa3.87□□□□□ -1.79
TCOF1-212ENST00000513538 R4GN34 69 aa3.87□□□□□ -1.79
TCOF1-212ENST00000513538 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
TCOF1-212ENST00000513538 TRAV7A0A075B6U4 112 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 M0QZ58 72 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 ACYP2P14621 99 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 SMIM20Q8N5G0 67 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
TCOF1-212ENST00000513538 MT-ATP8P03928 68 aa3.8□□□□□ -1.8
TCOF1-212ENST00000513538 LINC01554Q52M75 96 aa3.77□□□□□ -1.81
TCOF1-212ENST00000513538 K7ERU9 68 aa3.76□□□□□ -1.81
TCOF1-212ENST00000513538 CHKB-CPT1BH3BT56 60 aa3.74□□□□□ -1.81
TCOF1-212ENST00000513538 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
TCOF1-212ENST00000513538 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
TCOF1-212ENST00000513538 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
TCOF1-212ENST00000513538 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
TCOF1-212ENST00000513538 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
TCOF1-212ENST00000513538 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
TCOF1-212ENST00000513538 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
TCOF1-212ENST00000513538 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
TCOF1-212ENST00000513538 MT1EP04732 61 aa3.62□□□□□ -1.83
TCOF1-212ENST00000513538 SEC61GP60059 68 aa3.59□□□□□ -1.83
TCOF1-212ENST00000513538 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
TCOF1-212ENST00000513538 MT4P47944 62 aa3.56□□□□□ -1.84
TCOF1-212ENST00000513538 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
TCOF1-212ENST00000513538 COA5Q86WW8 74 aa3.55□□□□□ -1.84
TCOF1-212ENST00000513538 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
TCOF1-212ENST00000513538 COX7CP15954 63 aa3.52□□□□□ -1.85
TCOF1-212ENST00000513538 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
TCOF1-212ENST00000513538 H7BZZ5 65 aa3.49□□□□□ -1.85
TCOF1-212ENST00000513538 MT1GP13640 62 aa3.49□□□□□ -1.85
TCOF1-212ENST00000513538 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
TCOF1-212ENST00000513538 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms