RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 H3BS24 57 aa9.11□□□□□ -0.95
HMGCL-209ENST00000513148 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
HMGCL-209ENST00000513148 PRAC1Q96KF2 57 aa9.09□□□□□ -0.95
HMGCL-209ENST00000513148 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
HMGCL-209ENST00000513148 XP32Q5T750 250 aa9.02□□□□□ -0.97
HMGCL-209ENST00000513148 IGHV6-1A0A0B4J1U7 121 aa9□□□□□ -0.97
HMGCL-209ENST00000513148 RNF213Q63HN8 5207 aa9□□□□□ -0.97
HMGCL-209ENST00000513148 A0A1B0GU69 56 aa8.99□□□□□ -0.97
HMGCL-209ENST00000513148 UQCR11O14957 56 aa8.97□□□□□ -0.97
HMGCL-209ENST00000513148 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
HMGCL-209ENST00000513148 MIR22HGQ0VDD5 57 aa8.95□□□□□ -0.98
HMGCL-209ENST00000513148 Q5W150 140 aa8.9□□□□□ -0.98
HMGCL-209ENST00000513148 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
HMGCL-209ENST00000513148 MUC2Q02817 5179 aa8.89□□□□□ -0.99
HMGCL-209ENST00000513148 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
HMGCL-209ENST00000513148 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
HMGCL-209ENST00000513148 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
HMGCL-209ENST00000513148 CSAG1Q6PB30 78 aa8.81□□□□□ -1
HMGCL-209ENST00000513148 IGKV2-30P06310 120 aa8.78□□□□□ -1
HMGCL-209ENST00000513148 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
HMGCL-209ENST00000513148 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
HMGCL-209ENST00000513148 C20orf166-AS1Q96NR2 134 aa8.76□□□□□ -1.01
HMGCL-209ENST00000513148 A8MUU9 505 aa8.75□□□□□ -1.01
HMGCL-209ENST00000513148 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
HMGCL-209ENST00000513148 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
HMGCL-209ENST00000513148 ROMO1P60602 79 aa8.58□□□□□ -1.04
HMGCL-209ENST00000513148 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
HMGCL-209ENST00000513148 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
HMGCL-209ENST00000513148 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
HMGCL-209ENST00000513148 H0YAA0 97 aa8.44□□□□□ -1.06
HMGCL-209ENST00000513148 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
HMGCL-209ENST00000513148 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
HMGCL-209ENST00000513148 A0A1B0GU33 70 aa8.37□□□□□ -1.07
HMGCL-209ENST00000513148 MT1HP80294 61 aa8.34□□□□□ -1.07
HMGCL-209ENST00000513148 K7ERS5 55 aa8.33□□□□□ -1.08
HMGCL-209ENST00000513148 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
HMGCL-209ENST00000513148 M0R2T5 61 aa8.25□□□□□ -1.09
HMGCL-209ENST00000513148 P0C880 135 aa8.24□□□□□ -1.09
HMGCL-209ENST00000513148 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
HMGCL-209ENST00000513148 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
HMGCL-209ENST00000513148 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
HMGCL-209ENST00000513148 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
HMGCL-209ENST00000513148 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
HMGCL-209ENST00000513148 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
HMGCL-209ENST00000513148 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
HMGCL-209ENST00000513148 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
HMGCL-209ENST00000513148 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
HMGCL-209ENST00000513148 KRTAP15-1Q3LI76 137 aa7.99□□□□□ -1.13
HMGCL-209ENST00000513148 NDUFAF8A1L188 74 aa7.93□□□□□ -1.14
HMGCL-209ENST00000513148 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
HMGCL-209ENST00000513148 S4R3F8 94 aa7.9□□□□□ -1.14
HMGCL-209ENST00000513148 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.15
HMGCL-209ENST00000513148 MT2AP02795 61 aa7.86□□□□□ -1.15
HMGCL-209ENST00000513148 MT1FP04733 61 aa7.81□□□□□ -1.16
HMGCL-209ENST00000513148 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
HMGCL-209ENST00000513148 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
HMGCL-209ENST00000513148 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
HMGCL-209ENST00000513148 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.17
HMGCL-209ENST00000513148 A0A0D9SG42 100 aa7.69□□□□□ -1.18
HMGCL-209ENST00000513148 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
HMGCL-209ENST00000513148 FSIP2Q5CZC0 6907 aa7.65□□□□□ -1.18
HMGCL-209ENST00000513148 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
HMGCL-209ENST00000513148 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
HMGCL-209ENST00000513148 LCE2BO14633 110 aa7.56□□□□□ -1.2
HMGCL-209ENST00000513148 M0QZ58 72 aa7.52□□□□□ -1.2
HMGCL-209ENST00000513148 LUZP6Q538Z0 58 aa7.52□□□□□ -1.2
HMGCL-209ENST00000513148 USH2AO75445 5202 aa7.52□□□□□ -1.2
HMGCL-209ENST00000513148 CRCT1Q9UGL9 99 aa7.51□□□□□ -1.21
HMGCL-209ENST00000513148 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
HMGCL-209ENST00000513148 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
HMGCL-209ENST00000513148 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
HMGCL-209ENST00000513148 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
HMGCL-209ENST00000513148 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
HMGCL-209ENST00000513148 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
HMGCL-209ENST00000513148 R4GN34 69 aa7.27□□□□□ -1.25
HMGCL-209ENST00000513148 MT1BP07438 61 aa7.25□□□□□ -1.25
HMGCL-209ENST00000513148 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
HMGCL-209ENST00000513148 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
HMGCL-209ENST00000513148 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
HMGCL-209ENST00000513148 KRTAP10-5P60370 271 aa7□□□□□ -1.29
HMGCL-209ENST00000513148 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
HMGCL-209ENST00000513148 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
HMGCL-209ENST00000513148 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
HMGCL-209ENST00000513148 MT1XP80297 61 aa6.89□□□□□ -1.31
HMGCL-209ENST00000513148 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
HMGCL-209ENST00000513148 MACF1Q9UPN3 7388 aaKnown RBP6.88□□□□□ -1.31
HMGCL-209ENST00000513148 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
HMGCL-209ENST00000513148 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
HMGCL-209ENST00000513148 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
HMGCL-209ENST00000513148 TNP1P09430 55 aa6.66□□□□□ -1.34
HMGCL-209ENST00000513148 KMT2DO14686 5537 aa6.62□□□□□ -1.35
HMGCL-209ENST00000513148 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
HMGCL-209ENST00000513148 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
HMGCL-209ENST00000513148 INE1O15225 51 aa6.57□□□□□ -1.36
HMGCL-209ENST00000513148 KRTAP10-12P60413 245 aa6.52□□□□□ -1.37
HMGCL-209ENST00000513148 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
HMGCL-209ENST00000513148 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
HMGCL-209ENST00000513148 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
HMGCL-209ENST00000513148 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
HMGCL-209ENST00000513148 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms