RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
NR1I3-231ENST00000512340 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
NR1I3-231ENST00000512340 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
NR1I3-231ENST00000512340 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
NR1I3-231ENST00000512340 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
NR1I3-231ENST00000512340 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
NR1I3-231ENST00000512340 DEFB116Q30KQ4 102 aa4.03□□□□□ -1.76
NR1I3-231ENST00000512340 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
NR1I3-231ENST00000512340 A8MWP4 228 aa4.02□□□□□ -1.77
NR1I3-231ENST00000512340 H3BPC8 53 aa4.02□□□□□ -1.77
NR1I3-231ENST00000512340 DSCR10P59022 87 aa4.02□□□□□ -1.77
NR1I3-231ENST00000512340 ROMO1P60602 79 aa4.02□□□□□ -1.77
NR1I3-231ENST00000512340 C20orf166-AS1Q96NR2 134 aa4.01□□□□□ -1.77
NR1I3-231ENST00000512340 A8MUU9 505 aa4□□□□□ -1.77
NR1I3-231ENST00000512340 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
NR1I3-231ENST00000512340 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
NR1I3-231ENST00000512340 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
NR1I3-231ENST00000512340 COX6B2Q6YFQ2 88 aa3.97□□□□□ -1.77
NR1I3-231ENST00000512340 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
NR1I3-231ENST00000512340 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
NR1I3-231ENST00000512340 ADM2Q7Z4H4 148 aa3.94□□□□□ -1.78
NR1I3-231ENST00000512340 H0Y9P7 68 aa3.93□□□□□ -1.78
NR1I3-231ENST00000512340 CSAG1Q6PB30 78 aa3.93□□□□□ -1.78
NR1I3-231ENST00000512340 MRPL34Q9BQ48 92 aaKnown RBP3.93□□□□□ -1.78
NR1I3-231ENST00000512340 K7EQZ3 153 aa3.92□□□□□ -1.78
NR1I3-231ENST00000512340 SPINK7P58062 85 aa3.92□□□□□ -1.78
NR1I3-231ENST00000512340 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
NR1I3-231ENST00000512340 COA5Q86WW8 74 aa3.92□□□□□ -1.78
NR1I3-231ENST00000512340 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
NR1I3-231ENST00000512340 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
NR1I3-231ENST00000512340 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
NR1I3-231ENST00000512340 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
NR1I3-231ENST00000512340 M0R2T5 61 aa3.88□□□□□ -1.79
NR1I3-231ENST00000512340 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
NR1I3-231ENST00000512340 K7ERS5 55 aa3.87□□□□□ -1.79
NR1I3-231ENST00000512340 Q8N9L7 120 aa3.86□□□□□ -1.79
NR1I3-231ENST00000512340 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
NR1I3-231ENST00000512340 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
NR1I3-231ENST00000512340 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
NR1I3-231ENST00000512340 UQCR11O14957 56 aa3.83□□□□□ -1.8
NR1I3-231ENST00000512340 P0C880 135 aa3.83□□□□□ -1.8
NR1I3-231ENST00000512340 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
NR1I3-231ENST00000512340 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
NR1I3-231ENST00000512340 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
NR1I3-231ENST00000512340 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
NR1I3-231ENST00000512340 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
NR1I3-231ENST00000512340 HRES1P13985 223 aa3.79□□□□□ -1.8
NR1I3-231ENST00000512340 MT1HP80294 61 aa3.79□□□□□ -1.8
NR1I3-231ENST00000512340 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
NR1I3-231ENST00000512340 Q5W150 140 aa3.77□□□□□ -1.81
NR1I3-231ENST00000512340 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
NR1I3-231ENST00000512340 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
NR1I3-231ENST00000512340 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
NR1I3-231ENST00000512340 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
NR1I3-231ENST00000512340 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
NR1I3-231ENST00000512340 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
NR1I3-231ENST00000512340 A0A1B0GU69 56 aa3.7□□□□□ -1.82
NR1I3-231ENST00000512340 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
NR1I3-231ENST00000512340 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
NR1I3-231ENST00000512340 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
NR1I3-231ENST00000512340 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
NR1I3-231ENST00000512340 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
NR1I3-231ENST00000512340 ACYP2P14621 99 aa3.65□□□□□ -1.83
NR1I3-231ENST00000512340 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
NR1I3-231ENST00000512340 S4R3F8 94 aa3.64□□□□□ -1.83
NR1I3-231ENST00000512340 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
NR1I3-231ENST00000512340 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
NR1I3-231ENST00000512340 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
NR1I3-231ENST00000512340 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
NR1I3-231ENST00000512340 MT2AP02795 61 aa3.57□□□□□ -1.84
NR1I3-231ENST00000512340 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
NR1I3-231ENST00000512340 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
NR1I3-231ENST00000512340 USH2AO75445 5202 aa3.54□□□□□ -1.84
NR1I3-231ENST00000512340 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
NR1I3-231ENST00000512340 MT1FP04733 61 aa3.52□□□□□ -1.85
NR1I3-231ENST00000512340 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
NR1I3-231ENST00000512340 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
NR1I3-231ENST00000512340 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
NR1I3-231ENST00000512340 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
NR1I3-231ENST00000512340 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
NR1I3-231ENST00000512340 CRIPTQ9P021 101 aa3.48□□□□□ -1.85
NR1I3-231ENST00000512340 A0A1B0GU33 70 aa3.47□□□□□ -1.85
NR1I3-231ENST00000512340 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
NR1I3-231ENST00000512340 H0YAA0 97 aa3.46□□□□□ -1.86
NR1I3-231ENST00000512340 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
NR1I3-231ENST00000512340 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
NR1I3-231ENST00000512340 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
NR1I3-231ENST00000512340 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
NR1I3-231ENST00000512340 R4GN34 69 aa3.38□□□□□ -1.87
NR1I3-231ENST00000512340 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
NR1I3-231ENST00000512340 NEBP20929 6669 aa3.32□□□□□ -1.88
NR1I3-231ENST00000512340 M0QZ58 72 aa3.32□□□□□ -1.88
NR1I3-231ENST00000512340 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
NR1I3-231ENST00000512340 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
NR1I3-231ENST00000512340 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NR1I3-231ENST00000512340 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
NR1I3-231ENST00000512340 MT1BP07438 61 aa3.25□□□□□ -1.89
NR1I3-231ENST00000512340 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
NR1I3-231ENST00000512340 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
NR1I3-231ENST00000512340 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms