RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
PTPN13-208ENST00000511105 SS18L2Q9UHA2 77 aa2.32□□□□□ -2.04
PTPN13-208ENST00000511105 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
PTPN13-208ENST00000511105 TRBV7-4A0A0J9YYF1 115 aa2.3□□□□□ -2.04
PTPN13-208ENST00000511105 C9JAW5 83 aa2.3□□□□□ -2.04
PTPN13-208ENST00000511105 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
PTPN13-208ENST00000511105 SMIM20Q8N5G0 67 aa2.3□□□□□ -2.04
PTPN13-208ENST00000511105 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
PTPN13-208ENST00000511105 C14orf132Q9NPU4 83 aa2.3□□□□□ -2.04
PTPN13-208ENST00000511105 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
PTPN13-208ENST00000511105 TRBV20-1A0A075B6N2 111 aa2.29□□□□□ -2.04
PTPN13-208ENST00000511105 ATXN8Q156A1 80 aa2.29□□□□□ -2.04
PTPN13-208ENST00000511105 LOC105371267A0A1B0GV96 52 aa2.28□□□□□ -2.04
PTPN13-208ENST00000511105 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
PTPN13-208ENST00000511105 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
PTPN13-208ENST00000511105 LYRM7Q5U5X0 104 aa2.28□□□□□ -2.04
PTPN13-208ENST00000511105 USH2AO75445 5202 aa2.27□□□□□ -2.05
PTPN13-208ENST00000511105 Q6ZQT0 140 aa2.27□□□□□ -2.05
PTPN13-208ENST00000511105 IGKV3D-7A0A0C4DH55 119 aa2.26□□□□□ -2.05
PTPN13-208ENST00000511105 M0R143 59 aa2.26□□□□□ -2.05
PTPN13-208ENST00000511105 TAX1BP3O14907 124 aa2.26□□□□□ -2.05
PTPN13-208ENST00000511105 SPINK7P58062 85 aa2.26□□□□□ -2.05
PTPN13-208ENST00000511105 LCA10Q71F78 164 aa2.26□□□□□ -2.05
PTPN13-208ENST00000511105 H3BT86 120 aa2.25□□□□□ -2.05
PTPN13-208ENST00000511105 NREPQ16612 68 aa2.25□□□□□ -2.05
PTPN13-208ENST00000511105 ZCCHC13Q8WW36 166 aaKnown RBP2.25□□□□□ -2.05
PTPN13-208ENST00000511105 IMUPQ9GZP8 106 aa2.25□□□□□ -2.05
PTPN13-208ENST00000511105 TRAV7A0A075B6U4 112 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 TSTD3H0UI37 97 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 JMJD7-PLA2G4BH0Y9G9 81 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 NDUFB1O75438 58 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 MT2AP02795 61 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PTPN13-208ENST00000511105 LOC110117498A0A087WWA1 95 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 A0A1W2PPM0 123 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 MT1FP04733 61 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 P0C880 135 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 SMIM6P0DI80 62 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 WFDC13Q8IUB5 93 aa2.23□□□□□ -2.05
PTPN13-208ENST00000511105 J3KT08 172 aa2.22□□□□□ -2.05
PTPN13-208ENST00000511105 K7EQZ3 153 aa2.22□□□□□ -2.05
PTPN13-208ENST00000511105 LINC01554Q52M75 96 aa2.22□□□□□ -2.05
PTPN13-208ENST00000511105 PRR15Q8IV56 129 aa2.22□□□□□ -2.05
PTPN13-208ENST00000511105 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
PTPN13-208ENST00000511105 MMP24-AS1A0A0U1RRL7 71 aa2.21□□□□□ -2.06
PTPN13-208ENST00000511105 MRPL34Q9BQ48 92 aaKnown RBP2.21□□□□□ -2.06
PTPN13-208ENST00000511105 SPCS1Q9Y6A9 102 aa2.21□□□□□ -2.06
PTPN13-208ENST00000511105 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
PTPN13-208ENST00000511105 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
PTPN13-208ENST00000511105 PDE6GP18545 87 aa2.18□□□□□ -2.06
PTPN13-208ENST00000511105 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
PTPN13-208ENST00000511105 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
PTPN13-208ENST00000511105 LINC00846Q9NV44 126 aa2.18□□□□□ -2.06
PTPN13-208ENST00000511105 CASC2Q6XLA1 102 aa2.17□□□□□ -2.06
PTPN13-208ENST00000511105 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
PTPN13-208ENST00000511105 COL5A1-AS1Q5SY13 56 aa2.16□□□□□ -2.06
PTPN13-208ENST00000511105 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
PTPN13-208ENST00000511105 K7EP34 96 aa2.15□□□□□ -2.07
PTPN13-208ENST00000511105 H1FX-AS1Q4G0G2 97 aa2.15□□□□□ -2.07
PTPN13-208ENST00000511105 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
PTPN13-208ENST00000511105 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
PTPN13-208ENST00000511105 UBL5Q9BZL1 73 aa2.13□□□□□ -2.07
PTPN13-208ENST00000511105 A0A087WVE0 104 aa2.12□□□□□ -2.07
PTPN13-208ENST00000511105 C7orf65Q6ZTY9 151 aa2.12□□□□□ -2.07
PTPN13-208ENST00000511105 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
PTPN13-208ENST00000511105 TMEM258P61165 79 aa2.11□□□□□ -2.07
PTPN13-208ENST00000511105 GTF2H5Q6ZYL4 71 aa2.11□□□□□ -2.07
PTPN13-208ENST00000511105 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
PTPN13-208ENST00000511105 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
PTPN13-208ENST00000511105 RPS28P62857 69 aaKnown RBP2.1□□□□□ -2.07
PTPN13-208ENST00000511105 F8W1H4 67 aa2.09□□□□□ -2.07
PTPN13-208ENST00000511105 SCGB1A1P11684 91 aa2.09□□□□□ -2.07
PTPN13-208ENST00000511105 S4R3F8 94 aa2.08□□□□□ -2.08
PTPN13-208ENST00000511105 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
PTPN13-208ENST00000511105 A0A1B0GV90 55 aa2.06□□□□□ -2.08
PTPN13-208ENST00000511105 CSAG1Q6PB30 78 aa2.06□□□□□ -2.08
PTPN13-208ENST00000511105 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
PTPN13-208ENST00000511105 Q1T7F1 81 aa2.04□□□□□ -2.08
PTPN13-208ENST00000511105 TP53AIP1Q9HCN2 124 aa2.04□□□□□ -2.08
PTPN13-208ENST00000511105 H0Y9P7 68 aa2.03□□□□□ -2.08
PTPN13-208ENST00000511105 MT1BP07438 61 aa2.03□□□□□ -2.08
PTPN13-208ENST00000511105 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
PTPN13-208ENST00000511105 LINC00208Q96KT6 92 aa2.02□□□□□ -2.09
PTPN13-208ENST00000511105 TRAV22A0A0B4J277 110 aa2.01□□□□□ -2.09
PTPN13-208ENST00000511105 A6NN06 94 aa2.01□□□□□ -2.09
PTPN13-208ENST00000511105 Q5VV11 94 aa2.01□□□□□ -2.09
PTPN13-208ENST00000511105 LOC101927531A0A1B0GV80 90 aa2□□□□□ -2.09
PTPN13-208ENST00000511105 UQCRQO14949 82 aa2□□□□□ -2.09
PTPN13-208ENST00000511105 ACYP1P07311 99 aa2□□□□□ -2.09
PTPN13-208ENST00000511105 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
PTPN13-208ENST00000511105 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
PTPN13-208ENST00000511105 ROMO1P60602 79 aa1.99□□□□□ -2.09
PTPN13-208ENST00000511105 NDUFC1O43677 76 aa1.98□□□□□ -2.09
PTPN13-208ENST00000511105 KRTAP19-8Q3LI54 63 aa1.98□□□□□ -2.09
PTPN13-208ENST00000511105 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
PTPN13-208ENST00000511105 LINC00643Q86TS7 51 aa1.98□□□□□ -2.09
PTPN13-208ENST00000511105 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
PTPN13-208ENST00000511105 KMT2DO14686 5537 aa1.97□□□□□ -2.09
PTPN13-208ENST00000511105 NEBP20929 6669 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms