RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 A6NN06 94 aa8.71□□□□□ -1.02
CLMAT3-201ENST00000510576 SPATA8Q6RVD6 105 aa8.71□□□□□ -1.02
CLMAT3-201ENST00000510576 XP32Q5T750 250 aa8.7□□□□□ -1.02
CLMAT3-201ENST00000510576 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
CLMAT3-201ENST00000510576 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
CLMAT3-201ENST00000510576 DMBT1Q9UGM3 2413 aaPredicted RBP8.67□□□□□ -1.02
CLMAT3-201ENST00000510576 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
CLMAT3-201ENST00000510576 A0A1B0GU33 70 aa8.5□□□□□ -1.05
CLMAT3-201ENST00000510576 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
CLMAT3-201ENST00000510576 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
CLMAT3-201ENST00000510576 H0YAA0 97 aa8.46□□□□□ -1.06
CLMAT3-201ENST00000510576 S4R3F8 94 aa8.44□□□□□ -1.06
CLMAT3-201ENST00000510576 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
CLMAT3-201ENST00000510576 HERC1Q15751 4861 aa8.41□□□□□ -1.06
CLMAT3-201ENST00000510576 J3QL48 77 aa8.34□□□□□ -1.07
CLMAT3-201ENST00000510576 RBM12B-AS1Q9P1G2 102 aa8.3□□□□□ -1.08
CLMAT3-201ENST00000510576 LRP2P98164 4655 aa8.29□□□□□ -1.08
CLMAT3-201ENST00000510576 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
CLMAT3-201ENST00000510576 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
CLMAT3-201ENST00000510576 PRAC1Q96KF2 57 aa8.26□□□□□ -1.09
CLMAT3-201ENST00000510576 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
CLMAT3-201ENST00000510576 LPAP08519 4548 aa8.24□□□□□ -1.09
CLMAT3-201ENST00000510576 K7ERS5 55 aa8.21□□□□□ -1.1
CLMAT3-201ENST00000510576 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
CLMAT3-201ENST00000510576 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
CLMAT3-201ENST00000510576 P0C880 135 aa8.17□□□□□ -1.1
CLMAT3-201ENST00000510576 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
CLMAT3-201ENST00000510576 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
CLMAT3-201ENST00000510576 A0A0D9SG42 100 aa8.1□□□□□ -1.11
CLMAT3-201ENST00000510576 MUC17Q685J3 4493 aa8.03□□□□□ -1.12
CLMAT3-201ENST00000510576 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
CLMAT3-201ENST00000510576 M0QZ58 72 aa7.96□□□□□ -1.14
CLMAT3-201ENST00000510576 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.14
CLMAT3-201ENST00000510576 ROMO1P60602 79 aa7.95□□□□□ -1.14
CLMAT3-201ENST00000510576 LINC01554Q52M75 96 aa7.94□□□□□ -1.14
CLMAT3-201ENST00000510576 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
CLMAT3-201ENST00000510576 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
CLMAT3-201ENST00000510576 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
CLMAT3-201ENST00000510576 SPINT4Q6UDR6 99 aa7.86□□□□□ -1.15
CLMAT3-201ENST00000510576 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
CLMAT3-201ENST00000510576 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
CLMAT3-201ENST00000510576 MUC2Q02817 5179 aa7.81□□□□□ -1.16
CLMAT3-201ENST00000510576 R4GN34 69 aa7.8□□□□□ -1.16
CLMAT3-201ENST00000510576 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
CLMAT3-201ENST00000510576 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
CLMAT3-201ENST00000510576 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
CLMAT3-201ENST00000510576 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
CLMAT3-201ENST00000510576 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
CLMAT3-201ENST00000510576 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
CLMAT3-201ENST00000510576 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
CLMAT3-201ENST00000510576 M0R2T5 61 aa7.31□□□□□ -1.24
CLMAT3-201ENST00000510576 MT1HP80294 61 aa7.28□□□□□ -1.24
CLMAT3-201ENST00000510576 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
CLMAT3-201ENST00000510576 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
CLMAT3-201ENST00000510576 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
CLMAT3-201ENST00000510576 PP632Q6XCG6 107 aa7.15□□□□□ -1.27
CLMAT3-201ENST00000510576 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
CLMAT3-201ENST00000510576 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
CLMAT3-201ENST00000510576 MT2AP02795 61 aa7.12□□□□□ -1.27
CLMAT3-201ENST00000510576 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
CLMAT3-201ENST00000510576 MT1FP04733 61 aa7.1□□□□□ -1.27
CLMAT3-201ENST00000510576 TNP1P09430 55 aa7.09□□□□□ -1.27
CLMAT3-201ENST00000510576 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
CLMAT3-201ENST00000510576 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CLMAT3-201ENST00000510576 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
CLMAT3-201ENST00000510576 H3BS24 57 aa6.88□□□□□ -1.31
CLMAT3-201ENST00000510576 NDUFAF8A1L188 74 aa6.85□□□□□ -1.31
CLMAT3-201ENST00000510576 MT1BP07438 61 aa6.82□□□□□ -1.32
CLMAT3-201ENST00000510576 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
CLMAT3-201ENST00000510576 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
CLMAT3-201ENST00000510576 MT1XP80297 61 aa6.72□□□□□ -1.33
CLMAT3-201ENST00000510576 LCE3AQ5TA76 89 aa6.71□□□□□ -1.33
CLMAT3-201ENST00000510576 LUZP6Q538Z0 58 aa6.61□□□□□ -1.35
CLMAT3-201ENST00000510576 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
CLMAT3-201ENST00000510576 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
CLMAT3-201ENST00000510576 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
CLMAT3-201ENST00000510576 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
CLMAT3-201ENST00000510576 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
CLMAT3-201ENST00000510576 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
CLMAT3-201ENST00000510576 USH2AO75445 5202 aa6.55□□□□□ -1.36
CLMAT3-201ENST00000510576 LCE2BO14633 110 aa6.54□□□□□ -1.36
CLMAT3-201ENST00000510576 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
CLMAT3-201ENST00000510576 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
CLMAT3-201ENST00000510576 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
CLMAT3-201ENST00000510576 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
CLMAT3-201ENST00000510576 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
CLMAT3-201ENST00000510576 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
CLMAT3-201ENST00000510576 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
CLMAT3-201ENST00000510576 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
CLMAT3-201ENST00000510576 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.43
CLMAT3-201ENST00000510576 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CLMAT3-201ENST00000510576 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
CLMAT3-201ENST00000510576 A0A0A0MQY5 61 aa6.11□□□□□ -1.43
CLMAT3-201ENST00000510576 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CLMAT3-201ENST00000510576 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
CLMAT3-201ENST00000510576 KRTAP19-7Q3SYF9 63 aa5.98□□□□□ -1.45
CLMAT3-201ENST00000510576 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
CLMAT3-201ENST00000510576 MT1EP04732 61 aa5.86□□□□□ -1.47
CLMAT3-201ENST00000510576 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
CLMAT3-201ENST00000510576 MT1LQ93083 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms