RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 HTTP42858 3142 aa0.66□□□□□ -2.3
HMGB3P3-201ENST00000510526 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.3
HMGB3P3-201ENST00000510526 SPRR2BP35325 72 aa0.65□□□□□ -2.31
HMGB3P3-201ENST00000510526 ZFHX4Q86UP3 3567 aa0.65□□□□□ -2.31
HMGB3P3-201ENST00000510526 CFAP54Q96N23 3096 aa0.65□□□□□ -2.31
HMGB3P3-201ENST00000510526 VPS13AQ96RL7 3174 aa0.65□□□□□ -2.31
HMGB3P3-201ENST00000510526 MAST4O15021 2626 aa0.64□□□□□ -2.31
HMGB3P3-201ENST00000510526 VPS13DQ5THJ4 4388 aa0.64□□□□□ -2.31
HMGB3P3-201ENST00000510526 SPRR2AP35326 72 aa0.64□□□□□ -2.31
HMGB3P3-201ENST00000510526 RANBP2P49792 3224 aaKnown RBP0.64□□□□□ -2.31
HMGB3P3-201ENST00000510526 DCHS2Q6V1P9 2916 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 C5orf42Q9H799 3197 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 DNAH12Q6ZR08 3092 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 KALRNO60229 2985 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 SPRR2DP22532 72 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 DNAH11Q96DT5 4516 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 CELSR3Q9NYQ7 3312 aa0.63□□□□□ -2.31
HMGB3P3-201ENST00000510526 DMXL2Q8TDJ6 3036 aa0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 FREM2Q5SZK8 3169 aa0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 ANK2Q01484 3957 aa0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 SZT2Q5T011 3432 aa0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 GOLGB1Q14789 3259 aaKnown RBP0.62□□□□□ -2.31
HMGB3P3-201ENST00000510526 ATMQ13315 3056 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 EP400Q96L91 3159 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 KRTAP19-5Q3LI72 72 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 MXRA5Q9NR99 2828 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 ZANQ9Y493 2812 aa0.61□□□□□ -2.31
HMGB3P3-201ENST00000510526 PDZD2O15018 2839 aa0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 TACC2O95359 2948 aa0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 AKAP9Q99996 3911 aa0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 LAMA3Q16787 3333 aa0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
HMGB3P3-201ENST00000510526 TNXBP22105 4242 aa0.59□□□□□ -2.31
HMGB3P3-201ENST00000510526 DMXL1Q9Y485 3027 aa0.59□□□□□ -2.31
HMGB3P3-201ENST00000510526 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
HMGB3P3-201ENST00000510526 FBN2P35556 2912 aa0.59□□□□□ -2.32
HMGB3P3-201ENST00000510526 HRNRQ86YZ3 2850 aaPredicted RBP0.59□□□□□ -2.32
HMGB3P3-201ENST00000510526 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 LAMA5O15230 3695 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 WDFY4Q6ZS81 3184 aa0.58□□□□□ -2.32
HMGB3P3-201ENST00000510526 MYCBP2O75592 4640 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 RELNP78509 3460 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 SPEGQ15772 3267 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 LAMA1P25391 3075 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 MT1EP04732 61 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 BSNQ9UPA5 3926 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 CSMD1Q96PZ7 3565 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 SACSQ9NZJ4 4579 aa0.57□□□□□ -2.32
HMGB3P3-201ENST00000510526 XIRP2A4UGR9 3374 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 UTRNP46939 3433 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 DCHS1Q96JQ0 3298 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 SPRR2EP22531 72 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 LOC400499M0QZD8 3231 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 CMYA5Q8N3K9 4069 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
HMGB3P3-201ENST00000510526 DYNC2H1Q8NCM8 4307 aaKnown RBP0.55□□□□□ -2.32
HMGB3P3-201ENST00000510526 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
HMGB3P3-201ENST00000510526 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 LAMA2P24043 3122 aaKnown RBP0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 CUBNO60494 3623 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 DNAH8Q96JB1 4490 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 PRKDCP78527 4128 aaKnown RBP0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 MT1HP80294 61 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 MT1LQ93083 61 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 VPS13BQ7Z7G8 4022 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 DMDP11532 3685 aa0.54□□□□□ -2.32
HMGB3P3-201ENST00000510526 FAT2Q9NYQ8 4349 aa0.53□□□□□ -2.32
HMGB3P3-201ENST00000510526 LYSTQ99698 3801 aa0.53□□□□□ -2.32
HMGB3P3-201ENST00000510526 DNAH3Q8TD57 4116 aa0.53□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH10Q8IVF4 4471 aa0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 MUC3AQ02505 3323 aa0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 ANK3Q12955 4377 aaKnown RBP0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 USP34Q70CQ2 3546 aa0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 ZNF469Q96JG9 3925 aaPredicted RBP0.52□□□□□ -2.33
HMGB3P3-201ENST00000510526 ASPMQ8IZT6 3477 aa0.51□□□□□ -2.33
HMGB3P3-201ENST00000510526 SPENQ96T58 3664 aaKnown RBP0.51□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH2Q9P225 4427 aa0.51□□□□□ -2.33
HMGB3P3-201ENST00000510526 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
HMGB3P3-201ENST00000510526 SPTBN5Q9NRC6 3674 aaKnown RBP0.51□□□□□ -2.33
HMGB3P3-201ENST00000510526 CSMD2Q7Z408 3487 aa0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 HSPG2P98160 4391 aa0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 SMG1Q96Q15 3661 aaKnown RBP0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH9Q9NYC9 4486 aa0.5□□□□□ -2.33
HMGB3P3-201ENST00000510526 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
HMGB3P3-201ENST00000510526 PCNTO95613 3336 aa0.49□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH1Q9P2D7 4330 aa0.48□□□□□ -2.33
HMGB3P3-201ENST00000510526 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
HMGB3P3-201ENST00000510526 UNC80Q8N2C7 3258 aa0.48□□□□□ -2.33
HMGB3P3-201ENST00000510526 APOBP04114 4563 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms