RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FAM236BA0A1B0GV22 79 aa6.83□□□□□ -1.32
UBE2D3-228ENST00000508974 LCA10Q71F78 164 aa6.81□□□□□ -1.32
UBE2D3-228ENST00000508974 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
UBE2D3-228ENST00000508974 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
UBE2D3-228ENST00000508974 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
UBE2D3-228ENST00000508974 CYP4F30PQ9H0H9 118 aa6.75□□□□□ -1.33
UBE2D3-228ENST00000508974 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-228ENST00000508974 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
UBE2D3-228ENST00000508974 HIST1H4AP62805 103 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-228ENST00000508974 ACYP1P07311 99 aa6.73□□□□□ -1.33
UBE2D3-228ENST00000508974 A0A087WVE0 104 aa6.7□□□□□ -1.34
UBE2D3-228ENST00000508974 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
UBE2D3-228ENST00000508974 ATP5EP2Q5VTU8 51 aa6.69□□□□□ -1.34
UBE2D3-228ENST00000508974 FAM240AA0A1B0GVK7 77 aa6.68□□□□□ -1.34
UBE2D3-228ENST00000508974 H0Y9P7 68 aa6.66□□□□□ -1.34
UBE2D3-228ENST00000508974 Q5VV11 94 aa6.65□□□□□ -1.34
UBE2D3-228ENST00000508974 MT1BP07438 61 aa6.64□□□□□ -1.35
UBE2D3-228ENST00000508974 UQCRQO14949 82 aa6.63□□□□□ -1.35
UBE2D3-228ENST00000508974 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
UBE2D3-228ENST00000508974 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
UBE2D3-228ENST00000508974 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
UBE2D3-228ENST00000508974 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
UBE2D3-228ENST00000508974 A6NN06 94 aa6.6□□□□□ -1.35
UBE2D3-228ENST00000508974 ATOX1O00244 68 aa6.6□□□□□ -1.35
UBE2D3-228ENST00000508974 KRTAP19-8Q3LI54 63 aa6.59□□□□□ -1.35
UBE2D3-228ENST00000508974 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
UBE2D3-228ENST00000508974 A0A1B0GV90 55 aa6.57□□□□□ -1.36
UBE2D3-228ENST00000508974 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
UBE2D3-228ENST00000508974 LINC00208Q96KT6 92 aa6.55□□□□□ -1.36
UBE2D3-228ENST00000508974 NDUFC1O43677 76 aa6.54□□□□□ -1.36
UBE2D3-228ENST00000508974 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
UBE2D3-228ENST00000508974 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
UBE2D3-228ENST00000508974 MP68P56378 58 aa6.48□□□□□ -1.37
UBE2D3-228ENST00000508974 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
UBE2D3-228ENST00000508974 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
UBE2D3-228ENST00000508974 A8MUN3 132 aa6.46□□□□□ -1.38
UBE2D3-228ENST00000508974 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
UBE2D3-228ENST00000508974 H0YAA0 97 aa6.44□□□□□ -1.38
UBE2D3-228ENST00000508974 J3QR89 54 aa6.38□□□□□ -1.39
UBE2D3-228ENST00000508974 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
UBE2D3-228ENST00000508974 H3BPC8 53 aa6.33□□□□□ -1.4
UBE2D3-228ENST00000508974 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
UBE2D3-228ENST00000508974 P0C880 135 aa6.3□□□□□ -1.4
UBE2D3-228ENST00000508974 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
UBE2D3-228ENST00000508974 NEBP20929 6669 aa6.29□□□□□ -1.4
UBE2D3-228ENST00000508974 R4GN34 69 aa6.28□□□□□ -1.4
UBE2D3-228ENST00000508974 M0QZ58 72 aa6.25□□□□□ -1.41
UBE2D3-228ENST00000508974 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
UBE2D3-228ENST00000508974 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
UBE2D3-228ENST00000508974 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
UBE2D3-228ENST00000508974 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
UBE2D3-228ENST00000508974 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
UBE2D3-228ENST00000508974 MT1XP80297 61 aa6.22□□□□□ -1.41
UBE2D3-228ENST00000508974 KMT2DO14686 5537 aa6.2□□□□□ -1.42
UBE2D3-228ENST00000508974 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
UBE2D3-228ENST00000508974 TRAV7A0A075B6U4 112 aa6.16□□□□□ -1.42
UBE2D3-228ENST00000508974 ACYP2P14621 99 aa6.15□□□□□ -1.42
UBE2D3-228ENST00000508974 MDN1Q9NU22 5596 aa6.15□□□□□ -1.43
UBE2D3-228ENST00000508974 K7ERU9 68 aa6.13□□□□□ -1.43
UBE2D3-228ENST00000508974 KRTAP20-1Q3LI63 56 aa6.12□□□□□ -1.43
UBE2D3-228ENST00000508974 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
UBE2D3-228ENST00000508974 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
UBE2D3-228ENST00000508974 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
UBE2D3-228ENST00000508974 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
UBE2D3-228ENST00000508974 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
UBE2D3-228ENST00000508974 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
UBE2D3-228ENST00000508974 SPRR2EP22531 72 aa6.03□□□□□ -1.44
UBE2D3-228ENST00000508974 SPRR2BP35325 72 aa6.03□□□□□ -1.44
UBE2D3-228ENST00000508974 SPRR2AP35326 72 aa6.03□□□□□ -1.44
UBE2D3-228ENST00000508974 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
UBE2D3-228ENST00000508974 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
UBE2D3-228ENST00000508974 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
UBE2D3-228ENST00000508974 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
UBE2D3-228ENST00000508974 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
UBE2D3-228ENST00000508974 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
UBE2D3-228ENST00000508974 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
UBE2D3-228ENST00000508974 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
UBE2D3-228ENST00000508974 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
UBE2D3-228ENST00000508974 SPRR2DP22532 72 aa5.83□□□□□ -1.48
UBE2D3-228ENST00000508974 COA5Q86WW8 74 aa5.82□□□□□ -1.48
UBE2D3-228ENST00000508974 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
UBE2D3-228ENST00000508974 A0A0D9SG42 100 aa5.74□□□□□ -1.49
UBE2D3-228ENST00000508974 COX7CP15954 63 aa5.73□□□□□ -1.49
UBE2D3-228ENST00000508974 SEC61GP60059 68 aa5.73□□□□□ -1.49
UBE2D3-228ENST00000508974 KRTAP2-2Q9BYT5 123 aa5.73□□□□□ -1.49
UBE2D3-228ENST00000508974 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
UBE2D3-228ENST00000508974 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
UBE2D3-228ENST00000508974 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
UBE2D3-228ENST00000508974 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
UBE2D3-228ENST00000508974 H7BZZ5 65 aa5.65□□□□□ -1.5
UBE2D3-228ENST00000508974 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
UBE2D3-228ENST00000508974 A0A1B0GU33 70 aa5.63□□□□□ -1.51
UBE2D3-228ENST00000508974 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
UBE2D3-228ENST00000508974 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
UBE2D3-228ENST00000508974 A0A1B0GU69 56 aa5.53□□□□□ -1.52
UBE2D3-228ENST00000508974 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
UBE2D3-228ENST00000508974 MT1EP04732 61 aa5.52□□□□□ -1.53
UBE2D3-228ENST00000508974 A8MU10 97 aa5.49□□□□□ -1.53
UBE2D3-228ENST00000508974 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
UBE2D3-228ENST00000508974 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms