RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 COL5A1-AS1Q5SY13 56 aa7.73□□□□□ -1.17
SKP2-204ENST00000508514 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
SKP2-204ENST00000508514 IMUPQ9GZP8 106 aa7.66□□□□□ -1.18
SKP2-204ENST00000508514 TRAV22A0A0B4J277 110 aa7.65□□□□□ -1.18
SKP2-204ENST00000508514 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
SKP2-204ENST00000508514 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
SKP2-204ENST00000508514 H0YAA0 97 aa7.62□□□□□ -1.19
SKP2-204ENST00000508514 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
SKP2-204ENST00000508514 F8W1H4 67 aa7.6□□□□□ -1.19
SKP2-204ENST00000508514 MT1XP80297 61 aa7.57□□□□□ -1.2
SKP2-204ENST00000508514 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
SKP2-204ENST00000508514 NDUFC1O43677 76 aa7.56□□□□□ -1.2
SKP2-204ENST00000508514 KRTAP2-3P0C7H8 128 aa7.54□□□□□ -1.2
SKP2-204ENST00000508514 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SKP2-204ENST00000508514 KRTAP2-4Q9BYR9 128 aa7.54□□□□□ -1.2
SKP2-204ENST00000508514 SPRR2FQ96RM1 72 aa7.52□□□□□ -1.21
SKP2-204ENST00000508514 H0Y9P7 68 aa7.51□□□□□ -1.21
SKP2-204ENST00000508514 UQCRQO14949 82 aa7.51□□□□□ -1.21
SKP2-204ENST00000508514 A8MUN3 132 aa7.48□□□□□ -1.21
SKP2-204ENST00000508514 SPRR2EP22531 72 aa7.47□□□□□ -1.21
SKP2-204ENST00000508514 SPRR2BP35325 72 aa7.47□□□□□ -1.21
SKP2-204ENST00000508514 SPRR2AP35326 72 aa7.47□□□□□ -1.21
SKP2-204ENST00000508514 ATOX1O00244 68 aa7.45□□□□□ -1.22
SKP2-204ENST00000508514 HIST1H4AP62805 103 aaKnown RBP7.45□□□□□ -1.22
SKP2-204ENST00000508514 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
SKP2-204ENST00000508514 ACYP1P07311 99 aa7.44□□□□□ -1.22
SKP2-204ENST00000508514 ATP5EP2Q5VTU8 51 aa7.41□□□□□ -1.22
SKP2-204ENST00000508514 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.22
SKP2-204ENST00000508514 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.22
SKP2-204ENST00000508514 FAM240AA0A1B0GVK7 77 aa7.39□□□□□ -1.23
SKP2-204ENST00000508514 P0C880 135 aa7.38□□□□□ -1.23
SKP2-204ENST00000508514 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
SKP2-204ENST00000508514 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
SKP2-204ENST00000508514 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
SKP2-204ENST00000508514 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
SKP2-204ENST00000508514 PCP4L1A6NKN8 68 aa7.35□□□□□ -1.23
SKP2-204ENST00000508514 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
SKP2-204ENST00000508514 R4GN34 69 aa7.31□□□□□ -1.24
SKP2-204ENST00000508514 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
SKP2-204ENST00000508514 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
SKP2-204ENST00000508514 M0QZ58 72 aa7.26□□□□□ -1.25
SKP2-204ENST00000508514 LINC00643Q86TS7 51 aa7.26□□□□□ -1.25
SKP2-204ENST00000508514 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
SKP2-204ENST00000508514 MP68P56378 58 aa7.23□□□□□ -1.25
SKP2-204ENST00000508514 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
SKP2-204ENST00000508514 SPRR2DP22532 72 aa7.21□□□□□ -1.26
SKP2-204ENST00000508514 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
SKP2-204ENST00000508514 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
SKP2-204ENST00000508514 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
SKP2-204ENST00000508514 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
SKP2-204ENST00000508514 KRTAP4-12Q9BQ66 201 aa7.17□□□□□ -1.26
SKP2-204ENST00000508514 H3BPC8 53 aa7.1□□□□□ -1.27
SKP2-204ENST00000508514 KRTAP9-9Q9BYP9 154 aa7.1□□□□□ -1.27
SKP2-204ENST00000508514 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
SKP2-204ENST00000508514 TRAV7A0A075B6U4 112 aa6.99□□□□□ -1.29
SKP2-204ENST00000508514 A0A1B0GV90 55 aa6.95□□□□□ -1.3
SKP2-204ENST00000508514 SCGB1A1P11684 91 aa6.94□□□□□ -1.3
SKP2-204ENST00000508514 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
SKP2-204ENST00000508514 ACYP2P14621 99 aa6.92□□□□□ -1.3
SKP2-204ENST00000508514 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
SKP2-204ENST00000508514 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
SKP2-204ENST00000508514 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
SKP2-204ENST00000508514 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
SKP2-204ENST00000508514 J3QR89 54 aa6.79□□□□□ -1.32
SKP2-204ENST00000508514 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
SKP2-204ENST00000508514 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
SKP2-204ENST00000508514 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
SKP2-204ENST00000508514 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
SKP2-204ENST00000508514 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
SKP2-204ENST00000508514 MT1EP04732 61 aa6.71□□□□□ -1.34
SKP2-204ENST00000508514 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
SKP2-204ENST00000508514 SNURFQ9Y675 71 aa6.68□□□□□ -1.34
SKP2-204ENST00000508514 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
SKP2-204ENST00000508514 SMIM20Q8N5G0 67 aa6.67□□□□□ -1.34
SKP2-204ENST00000508514 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
SKP2-204ENST00000508514 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
SKP2-204ENST00000508514 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
SKP2-204ENST00000508514 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
SKP2-204ENST00000508514 A0A0D9SG42 100 aa6.5□□□□□ -1.37
SKP2-204ENST00000508514 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
SKP2-204ENST00000508514 MT1GP13640 62 aa6.48□□□□□ -1.37
SKP2-204ENST00000508514 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
SKP2-204ENST00000508514 K7ERU9 68 aa6.44□□□□□ -1.38
SKP2-204ENST00000508514 COA5Q86WW8 74 aa6.44□□□□□ -1.38
SKP2-204ENST00000508514 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
SKP2-204ENST00000508514 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
SKP2-204ENST00000508514 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
SKP2-204ENST00000508514 MT1MQ8N339 61 aa6.39□□□□□ -1.39
SKP2-204ENST00000508514 MT1LQ93083 61 aa6.37□□□□□ -1.39
SKP2-204ENST00000508514 HMCN1Q96RW7 5635 aa6.36□□□□□ -1.39
SKP2-204ENST00000508514 MT4P47944 62 aa6.36□□□□□ -1.39
SKP2-204ENST00000508514 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
SKP2-204ENST00000508514 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
SKP2-204ENST00000508514 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
SKP2-204ENST00000508514 A0A1B0GU33 70 aa6.34□□□□□ -1.39
SKP2-204ENST00000508514 SEC61GP60059 68 aa6.33□□□□□ -1.4
SKP2-204ENST00000508514 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
SKP2-204ENST00000508514 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
SKP2-204ENST00000508514 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
SKP2-204ENST00000508514 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms