RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 LPAP08519 4548 aa3.72□□□□□ -1.81
TNPO1-204ENST00000506351 HERC2O95714 4834 aa3.72□□□□□ -1.81
TNPO1-204ENST00000506351 SEC61GP60059 68 aa3.72□□□□□ -1.81
TNPO1-204ENST00000506351 LRP2P98164 4655 aa3.71□□□□□ -1.82
TNPO1-204ENST00000506351 J3QL48 77 aa3.71□□□□□ -1.82
TNPO1-204ENST00000506351 UQCR11O14957 56 aa3.7□□□□□ -1.82
TNPO1-204ENST00000506351 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
TNPO1-204ENST00000506351 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
TNPO1-204ENST00000506351 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
TNPO1-204ENST00000506351 S4R3F8 94 aa3.69□□□□□ -1.82
TNPO1-204ENST00000506351 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
TNPO1-204ENST00000506351 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
TNPO1-204ENST00000506351 A6NN06 94 aa3.66□□□□□ -1.82
TNPO1-204ENST00000506351 RBM12B-AS1Q9P1G2 102 aa3.65□□□□□ -1.83
TNPO1-204ENST00000506351 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
TNPO1-204ENST00000506351 A0A1B0GU33 70 aa3.63□□□□□ -1.83
TNPO1-204ENST00000506351 H0YAA0 97 aa3.63□□□□□ -1.83
TNPO1-204ENST00000506351 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
TNPO1-204ENST00000506351 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
TNPO1-204ENST00000506351 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
TNPO1-204ENST00000506351 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
TNPO1-204ENST00000506351 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.84
TNPO1-204ENST00000506351 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
TNPO1-204ENST00000506351 P0C880 135 aa3.55□□□□□ -1.84
TNPO1-204ENST00000506351 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
TNPO1-204ENST00000506351 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
TNPO1-204ENST00000506351 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
TNPO1-204ENST00000506351 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
TNPO1-204ENST00000506351 HERC1Q15751 4861 aa3.5□□□□□ -1.85
TNPO1-204ENST00000506351 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
TNPO1-204ENST00000506351 A0A0D9SG42 100 aa3.47□□□□□ -1.85
TNPO1-204ENST00000506351 K7ERS5 55 aa3.47□□□□□ -1.85
TNPO1-204ENST00000506351 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
TNPO1-204ENST00000506351 M0QZ58 72 aa3.44□□□□□ -1.86
TNPO1-204ENST00000506351 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
TNPO1-204ENST00000506351 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
TNPO1-204ENST00000506351 KRTAP12-1P59990 96 aa3.4□□□□□ -1.86
TNPO1-204ENST00000506351 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
TNPO1-204ENST00000506351 R4GN34 69 aa3.39□□□□□ -1.87
TNPO1-204ENST00000506351 MUC2Q02817 5179 aa3.39□□□□□ -1.87
TNPO1-204ENST00000506351 ROMO1P60602 79 aa3.37□□□□□ -1.87
TNPO1-204ENST00000506351 LCE2CQ5TA81 110 aa3.37□□□□□ -1.87
TNPO1-204ENST00000506351 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
TNPO1-204ENST00000506351 H3BS24 57 aa3.35□□□□□ -1.87
TNPO1-204ENST00000506351 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
TNPO1-204ENST00000506351 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
TNPO1-204ENST00000506351 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
TNPO1-204ENST00000506351 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
TNPO1-204ENST00000506351 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
TNPO1-204ENST00000506351 MT1HP80294 61 aa3.29□□□□□ -1.88
TNPO1-204ENST00000506351 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
TNPO1-204ENST00000506351 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
TNPO1-204ENST00000506351 M0R2T5 61 aa3.25□□□□□ -1.89
TNPO1-204ENST00000506351 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
TNPO1-204ENST00000506351 MT2AP02795 61 aa3.2□□□□□ -1.9
TNPO1-204ENST00000506351 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
TNPO1-204ENST00000506351 MT1FP04733 61 aa3.19□□□□□ -1.9
TNPO1-204ENST00000506351 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
TNPO1-204ENST00000506351 KRTAP19-1Q8IUB9 90 aa3.19□□□□□ -1.9
TNPO1-204ENST00000506351 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
TNPO1-204ENST00000506351 LCE2BO14633 110 aa3.17□□□□□ -1.9
TNPO1-204ENST00000506351 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
TNPO1-204ENST00000506351 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
TNPO1-204ENST00000506351 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
TNPO1-204ENST00000506351 KRTAP9-3Q9BYQ3 159 aa3.06□□□□□ -1.92
TNPO1-204ENST00000506351 TNP1P09430 55 aa3.06□□□□□ -1.92
TNPO1-204ENST00000506351 MT1BP07438 61 aa3.06□□□□□ -1.92
TNPO1-204ENST00000506351 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
TNPO1-204ENST00000506351 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
TNPO1-204ENST00000506351 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
TNPO1-204ENST00000506351 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
TNPO1-204ENST00000506351 MT1XP80297 61 aa2.99□□□□□ -1.93
TNPO1-204ENST00000506351 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
TNPO1-204ENST00000506351 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
TNPO1-204ENST00000506351 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
TNPO1-204ENST00000506351 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
TNPO1-204ENST00000506351 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
TNPO1-204ENST00000506351 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
TNPO1-204ENST00000506351 USH2AO75445 5202 aa2.83□□□□□ -1.96
TNPO1-204ENST00000506351 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
TNPO1-204ENST00000506351 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
TNPO1-204ENST00000506351 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
TNPO1-204ENST00000506351 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
TNPO1-204ENST00000506351 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
TNPO1-204ENST00000506351 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
TNPO1-204ENST00000506351 FSIP2Q5CZC0 6907 aa2.74□□□□□ -1.97
TNPO1-204ENST00000506351 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
TNPO1-204ENST00000506351 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
TNPO1-204ENST00000506351 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
TNPO1-204ENST00000506351 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
TNPO1-204ENST00000506351 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
TNPO1-204ENST00000506351 KMT2DO14686 5537 aa2.7□□□□□ -1.98
TNPO1-204ENST00000506351 KRTAP9-2Q9BYQ4 174 aa2.68□□□□□ -1.98
TNPO1-204ENST00000506351 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
TNPO1-204ENST00000506351 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
TNPO1-204ENST00000506351 MT1EP04732 61 aa2.61□□□□□ -1.99
TNPO1-204ENST00000506351 MT1LQ93083 61 aa2.58□□□□□ -2
TNPO1-204ENST00000506351 KRTAP9-6A0A140TA67 174 aa2.56□□□□□ -2
TNPO1-204ENST00000506351 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
TNPO1-204ENST00000506351 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms