RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
TRAPPC11-204ENST00000505676 A8MU10 97 aa8.81□□□□□ -1
TRAPPC11-204ENST00000505676 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
TRAPPC11-204ENST00000505676 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
TRAPPC11-204ENST00000505676 RBM12B-AS1Q9P1G2 102 aa8.79□□□□□ -1
TRAPPC11-204ENST00000505676 S4R3F8 94 aa8.78□□□□□ -1
TRAPPC11-204ENST00000505676 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
TRAPPC11-204ENST00000505676 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
TRAPPC11-204ENST00000505676 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
TRAPPC11-204ENST00000505676 A0A1B0GU33 70 aa8.7□□□□□ -1.02
TRAPPC11-204ENST00000505676 A6NN06 94 aa8.66□□□□□ -1.02
TRAPPC11-204ENST00000505676 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
TRAPPC11-204ENST00000505676 HERC2O95714 4834 aa8.62□□□□□ -1.03
TRAPPC11-204ENST00000505676 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
TRAPPC11-204ENST00000505676 H0YAA0 97 aa8.57□□□□□ -1.04
TRAPPC11-204ENST00000505676 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
TRAPPC11-204ENST00000505676 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
TRAPPC11-204ENST00000505676 LRP2P98164 4655 aa8.53□□□□□ -1.04
TRAPPC11-204ENST00000505676 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC11-204ENST00000505676 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
TRAPPC11-204ENST00000505676 LPAP08519 4548 aa8.44□□□□□ -1.06
TRAPPC11-204ENST00000505676 K7ERS5 55 aa8.44□□□□□ -1.06
TRAPPC11-204ENST00000505676 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
TRAPPC11-204ENST00000505676 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
TRAPPC11-204ENST00000505676 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
TRAPPC11-204ENST00000505676 P0C880 135 aa8.35□□□□□ -1.07
TRAPPC11-204ENST00000505676 M0QZ58 72 aa8.34□□□□□ -1.07
TRAPPC11-204ENST00000505676 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
TRAPPC11-204ENST00000505676 KRTAP13-4Q3LI77 160 aa8.28□□□□□ -1.08
TRAPPC11-204ENST00000505676 A0A0D9SG42 100 aa8.18□□□□□ -1.1
TRAPPC11-204ENST00000505676 PCLOQ9Y6V0 5065 aa8.12□□□□□ -1.11
TRAPPC11-204ENST00000505676 R4GN34 69 aa8.11□□□□□ -1.11
TRAPPC11-204ENST00000505676 ROMO1P60602 79 aa8.07□□□□□ -1.12
TRAPPC11-204ENST00000505676 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
TRAPPC11-204ENST00000505676 HERC1Q15751 4861 aa8.07□□□□□ -1.12
TRAPPC11-204ENST00000505676 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
TRAPPC11-204ENST00000505676 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
TRAPPC11-204ENST00000505676 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
TRAPPC11-204ENST00000505676 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
TRAPPC11-204ENST00000505676 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
TRAPPC11-204ENST00000505676 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC11-204ENST00000505676 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
TRAPPC11-204ENST00000505676 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
TRAPPC11-204ENST00000505676 LINC01554Q52M75 96 aa7.9□□□□□ -1.15
TRAPPC11-204ENST00000505676 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC11-204ENST00000505676 MT1HP80294 61 aa7.77□□□□□ -1.17
TRAPPC11-204ENST00000505676 M0R2T5 61 aa7.76□□□□□ -1.17
TRAPPC11-204ENST00000505676 MUC2Q02817 5179 aa7.74□□□□□ -1.17
TRAPPC11-204ENST00000505676 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
TRAPPC11-204ENST00000505676 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
TRAPPC11-204ENST00000505676 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
TRAPPC11-204ENST00000505676 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
TRAPPC11-204ENST00000505676 MT2AP02795 61 aa7.55□□□□□ -1.2
TRAPPC11-204ENST00000505676 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
TRAPPC11-204ENST00000505676 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
TRAPPC11-204ENST00000505676 KRTAP10-10P60014 251 aa7.52□□□□□ -1.2
TRAPPC11-204ENST00000505676 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.2
TRAPPC11-204ENST00000505676 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
TRAPPC11-204ENST00000505676 MT1FP04733 61 aa7.5□□□□□ -1.21
TRAPPC11-204ENST00000505676 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
TRAPPC11-204ENST00000505676 FAT4Q6V0I7 4981 aa7.44□□□□□ -1.22
TRAPPC11-204ENST00000505676 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
TRAPPC11-204ENST00000505676 TNP1P09430 55 aa7.37□□□□□ -1.23
TRAPPC11-204ENST00000505676 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
TRAPPC11-204ENST00000505676 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
TRAPPC11-204ENST00000505676 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.25
TRAPPC11-204ENST00000505676 MT1BP07438 61 aa7.2□□□□□ -1.26
TRAPPC11-204ENST00000505676 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
TRAPPC11-204ENST00000505676 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
TRAPPC11-204ENST00000505676 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
TRAPPC11-204ENST00000505676 MT1XP80297 61 aa7.05□□□□□ -1.28
TRAPPC11-204ENST00000505676 LCE2BO14633 110 aa6.95□□□□□ -1.3
TRAPPC11-204ENST00000505676 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
TRAPPC11-204ENST00000505676 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
TRAPPC11-204ENST00000505676 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
TRAPPC11-204ENST00000505676 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-204ENST00000505676 LUZP6Q538Z0 58 aa6.68□□□□□ -1.34
TRAPPC11-204ENST00000505676 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
TRAPPC11-204ENST00000505676 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
TRAPPC11-204ENST00000505676 NDUFAF8A1L188 74 aa6.65□□□□□ -1.34
TRAPPC11-204ENST00000505676 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
TRAPPC11-204ENST00000505676 USH2AO75445 5202 aa6.51□□□□□ -1.37
TRAPPC11-204ENST00000505676 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC11-204ENST00000505676 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
TRAPPC11-204ENST00000505676 H3BS24 57 aa6.44□□□□□ -1.38
TRAPPC11-204ENST00000505676 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
TRAPPC11-204ENST00000505676 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
TRAPPC11-204ENST00000505676 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
TRAPPC11-204ENST00000505676 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
TRAPPC11-204ENST00000505676 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
TRAPPC11-204ENST00000505676 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
TRAPPC11-204ENST00000505676 MT1EP04732 61 aa6.17□□□□□ -1.42
TRAPPC11-204ENST00000505676 MT1LQ93083 61 aa6.1□□□□□ -1.43
TRAPPC11-204ENST00000505676 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
TRAPPC11-204ENST00000505676 KMT2DO14686 5537 aa6.04□□□□□ -1.44
TRAPPC11-204ENST00000505676 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
TRAPPC11-204ENST00000505676 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC11-204ENST00000505676 MT1GP13640 62 aa5.89□□□□□ -1.47
TRAPPC11-204ENST00000505676 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
TRAPPC11-204ENST00000505676 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms