RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
LETM1-203ENST00000505551 COX6B2Q6YFQ2 88 aa7.14□□□□□ -1.27
LETM1-203ENST00000505551 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
LETM1-203ENST00000505551 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
LETM1-203ENST00000505551 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
LETM1-203ENST00000505551 APOBP04114 4563 aaKnown RBP7.11□□□□□ -1.27
LETM1-203ENST00000505551 RYR3Q15413 4870 aa7.06□□□□□ -1.28
LETM1-203ENST00000505551 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
LETM1-203ENST00000505551 A0A1B0GVY2 172 aa7.05□□□□□ -1.28
LETM1-203ENST00000505551 A0A0D9SG42 100 aa6.99□□□□□ -1.29
LETM1-203ENST00000505551 LRP1Q07954 4544 aaKnown RBP6.98□□□□□ -1.29
LETM1-203ENST00000505551 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
LETM1-203ENST00000505551 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
LETM1-203ENST00000505551 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
LETM1-203ENST00000505551 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
LETM1-203ENST00000505551 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
LETM1-203ENST00000505551 HSPG2P98160 4391 aa6.92□□□□□ -1.3
LETM1-203ENST00000505551 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
LETM1-203ENST00000505551 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
LETM1-203ENST00000505551 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
LETM1-203ENST00000505551 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
LETM1-203ENST00000505551 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.32
LETM1-203ENST00000505551 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
LETM1-203ENST00000505551 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
LETM1-203ENST00000505551 S4R3F8 94 aa6.81□□□□□ -1.32
LETM1-203ENST00000505551 Q5VSD8 79 aa6.81□□□□□ -1.32
LETM1-203ENST00000505551 RYR1P21817 5038 aa6.81□□□□□ -1.32
LETM1-203ENST00000505551 TNXBP22105 4242 aa6.79□□□□□ -1.32
LETM1-203ENST00000505551 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
LETM1-203ENST00000505551 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
LETM1-203ENST00000505551 XP32Q5T750 250 aa6.75□□□□□ -1.33
LETM1-203ENST00000505551 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
LETM1-203ENST00000505551 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
LETM1-203ENST00000505551 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
LETM1-203ENST00000505551 ABCA13Q86UQ4 5058 aa6.58□□□□□ -1.36
LETM1-203ENST00000505551 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
LETM1-203ENST00000505551 LPAP08519 4548 aa6.54□□□□□ -1.36
LETM1-203ENST00000505551 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
LETM1-203ENST00000505551 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
LETM1-203ENST00000505551 LRP2P98164 4655 aa6.51□□□□□ -1.37
LETM1-203ENST00000505551 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
LETM1-203ENST00000505551 R4GN34 69 aa6.49□□□□□ -1.37
LETM1-203ENST00000505551 M0QZ58 72 aa6.47□□□□□ -1.37
LETM1-203ENST00000505551 HERC2O95714 4834 aa6.41□□□□□ -1.38
LETM1-203ENST00000505551 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
LETM1-203ENST00000505551 MUC2Q02817 5179 aa6.25□□□□□ -1.41
LETM1-203ENST00000505551 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
LETM1-203ENST00000505551 HERC1Q15751 4861 aa6.23□□□□□ -1.41
LETM1-203ENST00000505551 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
LETM1-203ENST00000505551 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
LETM1-203ENST00000505551 KRTAP4-1Q9BYQ7 146 aa6.09□□□□□ -1.43
LETM1-203ENST00000505551 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
LETM1-203ENST00000505551 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
LETM1-203ENST00000505551 INE1O15225 51 aa6.02□□□□□ -1.45
LETM1-203ENST00000505551 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
LETM1-203ENST00000505551 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
LETM1-203ENST00000505551 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
LETM1-203ENST00000505551 FAT4Q6V0I7 4981 aa5.93□□□□□ -1.46
LETM1-203ENST00000505551 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
LETM1-203ENST00000505551 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
LETM1-203ENST00000505551 FLGP20930 4061 aaPredicted RBP5.8□□□□□ -1.48
LETM1-203ENST00000505551 TNP1P09430 55 aa5.77□□□□□ -1.49
LETM1-203ENST00000505551 M0R2T5 61 aa5.62□□□□□ -1.51
LETM1-203ENST00000505551 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
LETM1-203ENST00000505551 MT1HP80294 61 aa5.5□□□□□ -1.53
LETM1-203ENST00000505551 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
LETM1-203ENST00000505551 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
LETM1-203ENST00000505551 MT1FP04733 61 aa5.37□□□□□ -1.55
LETM1-203ENST00000505551 MT2AP02795 61 aa5.35□□□□□ -1.55
LETM1-203ENST00000505551 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
LETM1-203ENST00000505551 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
LETM1-203ENST00000505551 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
LETM1-203ENST00000505551 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
LETM1-203ENST00000505551 USH2AO75445 5202 aa5.22□□□□□ -1.57
LETM1-203ENST00000505551 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
LETM1-203ENST00000505551 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
LETM1-203ENST00000505551 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
LETM1-203ENST00000505551 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
LETM1-203ENST00000505551 MT1BP07438 61 aa5.09□□□□□ -1.59
LETM1-203ENST00000505551 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
LETM1-203ENST00000505551 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
LETM1-203ENST00000505551 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
LETM1-203ENST00000505551 MT1XP80297 61 aa5.01□□□□□ -1.61
LETM1-203ENST00000505551 LCE2BO14633 110 aa5□□□□□ -1.61
LETM1-203ENST00000505551 KMT2DO14686 5537 aa5□□□□□ -1.61
LETM1-203ENST00000505551 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
LETM1-203ENST00000505551 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
LETM1-203ENST00000505551 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
LETM1-203ENST00000505551 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
LETM1-203ENST00000505551 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
LETM1-203ENST00000505551 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
LETM1-203ENST00000505551 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
LETM1-203ENST00000505551 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
LETM1-203ENST00000505551 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
LETM1-203ENST00000505551 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
LETM1-203ENST00000505551 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
LETM1-203ENST00000505551 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.66
LETM1-203ENST00000505551 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
LETM1-203ENST00000505551 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
LETM1-203ENST00000505551 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms