RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 BRK1Q8WUW1 75 aa12.64□□□□□ -0.39
DHFR-203ENST00000505337 MUC17Q685J3 4493 aa12.61□□□□□ -0.39
DHFR-203ENST00000505337 SPTSSBQ8NFR3 76 aa12.58□□□□□ -0.4
DHFR-203ENST00000505337 A0A1B0GU69 56 aa12.55□□□□□ -0.4
DHFR-203ENST00000505337 PRO0628Q9UI54 55 aa12.55□□□□□ -0.4
DHFR-203ENST00000505337 A6NED7 52 aa12.49□□□□□ -0.41
DHFR-203ENST00000505337 SEC61BP60468 96 aaKnown RBP12.42□□□□□ -0.42
DHFR-203ENST00000505337 A8MU10 97 aa12.4□□□□□ -0.43
DHFR-203ENST00000505337 LCA10Q71F78 164 aa12.39□□□□□ -0.43
DHFR-203ENST00000505337 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
DHFR-203ENST00000505337 CDC42SE1Q9NRR8 79 aa12.36□□□□□ -0.43
DHFR-203ENST00000505337 SVIPQ8NHG7 77 aa12.35□□□□□ -0.43
DHFR-203ENST00000505337 H1FX-AS1Q4G0G2 97 aa12.34□□□□□ -0.43
DHFR-203ENST00000505337 S4R3F8 94 aa12.34□□□□□ -0.43
DHFR-203ENST00000505337 RBM12B-AS1Q9P1G2 102 aa12.33□□□□□ -0.44
DHFR-203ENST00000505337 SEC61GP60059 68 aa12.32□□□□□ -0.44
DHFR-203ENST00000505337 KRTAP4-1Q9BYQ7 146 aa12.29□□□□□ -0.44
DHFR-203ENST00000505337 FAT4Q6V0I7 4981 aa12.28□□□□□ -0.44
DHFR-203ENST00000505337 UQCR11O14957 56 aa12.23□□□□□ -0.45
DHFR-203ENST00000505337 SPATA8Q6RVD6 105 aa12.17□□□□□ -0.46
DHFR-203ENST00000505337 LCE2AQ5TA79 106 aaPredicted RBP12.14□□□□□ -0.47
DHFR-203ENST00000505337 MIR22HGQ0VDD5 57 aa12.13□□□□□ -0.47
DHFR-203ENST00000505337 A0A1B0GU33 70 aa12.06□□□□□ -0.48
DHFR-203ENST00000505337 KRTAP10-6P60371 365 aaPredicted RBP12.04□□□□□ -0.48
DHFR-203ENST00000505337 KRTAP3-2Q9BYR7 98 aa12.03□□□□□ -0.48
DHFR-203ENST00000505337 H0YAA0 97 aa12.01□□□□□ -0.49
DHFR-203ENST00000505337 KRTAP19-2Q3LHN2 52 aa12.01□□□□□ -0.49
DHFR-203ENST00000505337 CSAG1Q6PB30 78 aa11.98□□□□□ -0.49
DHFR-203ENST00000505337 PMAIP1Q13794 54 aa11.93□□□□□ -0.5
DHFR-203ENST00000505337 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
DHFR-203ENST00000505337 A6NN06 94 aa11.89□□□□□ -0.51
DHFR-203ENST00000505337 P0C880 135 aa11.87□□□□□ -0.51
DHFR-203ENST00000505337 ADM2Q7Z4H4 148 aa11.84□□□□□ -0.51
DHFR-203ENST00000505337 KRTAP13-4Q3LI77 160 aa11.77□□□□□ -0.52
DHFR-203ENST00000505337 MT1HP80294 61 aa11.74□□□□□ -0.53
DHFR-203ENST00000505337 FLGP20930 4061 aaPredicted RBP11.67□□□□□ -0.54
DHFR-203ENST00000505337 KRTAP9-2Q9BYQ4 174 aa11.66□□□□□ -0.54
DHFR-203ENST00000505337 KTN1-AS1Q86SY8 53 aa11.59□□□□□ -0.55
DHFR-203ENST00000505337 M0QZ58 72 aa11.54□□□□□ -0.56
DHFR-203ENST00000505337 A0A0D9SG42 100 aa11.52□□□□□ -0.57
DHFR-203ENST00000505337 LORP23490 312 aaPredicted RBP11.49□□□□□ -0.57
DHFR-203ENST00000505337 M0R2T5 61 aa11.48□□□□□ -0.57
DHFR-203ENST00000505337 K7ERS5 55 aa11.46□□□□□ -0.58
DHFR-203ENST00000505337 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
DHFR-203ENST00000505337 R4GN34 69 aa11.38□□□□□ -0.59
DHFR-203ENST00000505337 KRTAP12-1P59990 96 aa11.32□□□□□ -0.6
DHFR-203ENST00000505337 KRTAP12-2P59991 146 aa11.32□□□□□ -0.6
DHFR-203ENST00000505337 SPINT4Q6UDR6 99 aa11.2□□□□□ -0.62
DHFR-203ENST00000505337 PRAC1Q96KF2 57 aa11.2□□□□□ -0.62
DHFR-203ENST00000505337 KRTAP9-6A0A140TA67 174 aa11.18□□□□□ -0.62
DHFR-203ENST00000505337 LINC01554Q52M75 96 aa11.18□□□□□ -0.62
DHFR-203ENST00000505337 KRTAP9-8Q9BYQ0 159 aa11.16□□□□□ -0.62
DHFR-203ENST00000505337 CRIPTQ9P021 101 aa11.14□□□□□ -0.63
DHFR-203ENST00000505337 FSIP2Q5CZC0 6907 aa11.13□□□□□ -0.63
DHFR-203ENST00000505337 ROMO1P60602 79 aa11.1□□□□□ -0.63
DHFR-203ENST00000505337 CRCT1Q9UGL9 99 aa11.04□□□□□ -0.64
DHFR-203ENST00000505337 MT2AP02795 61 aa11□□□□□ -0.65
DHFR-203ENST00000505337 MT1FP04733 61 aa10.92□□□□□ -0.66
DHFR-203ENST00000505337 SPRR2GQ9BYE4 73 aa10.88□□□□□ -0.67
DHFR-203ENST00000505337 KRTAP10-10P60014 251 aa10.84□□□□□ -0.67
DHFR-203ENST00000505337 KRTAP25-1Q3LHN0 102 aa10.84□□□□□ -0.67
DHFR-203ENST00000505337 KRTAP19-1Q8IUB9 90 aa10.84□□□□□ -0.67
DHFR-203ENST00000505337 USH2AO75445 5202 aa10.82□□□□□ -0.68
DHFR-203ENST00000505337 KRTAP9-3Q9BYQ3 159 aa10.81□□□□□ -0.68
DHFR-203ENST00000505337 LCE2BO14633 110 aa10.72□□□□□ -0.69
DHFR-203ENST00000505337 C10orf95Q9H7T3 257 aa10.7□□□□□ -0.7
DHFR-203ENST00000505337 CAMK2N1Q7Z7J9 78 aa10.68□□□□□ -0.7
DHFR-203ENST00000505337 SSPOA2VEC9 5147 aa10.68□□□□□ -0.7
DHFR-203ENST00000505337 KRTAP19-8Q3LI54 63 aa10.55□□□□□ -0.72
DHFR-203ENST00000505337 PLAC4Q8WY50 150 aa10.51□□□□□ -0.73
DHFR-203ENST00000505337 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.74
DHFR-203ENST00000505337 MT1BP07438 61 aa10.39□□□□□ -0.75
DHFR-203ENST00000505337 KRTAP19-6Q3LI70 58 aa10.29□□□□□ -0.76
DHFR-203ENST00000505337 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.27□□□□□ -0.76
DHFR-203ENST00000505337 TNP1P09430 55 aa10.24□□□□□ -0.77
DHFR-203ENST00000505337 PP632Q6XCG6 107 aa10.15□□□□□ -0.78
DHFR-203ENST00000505337 MT1XP80297 61 aa10.13□□□□□ -0.79
DHFR-203ENST00000505337 KRTAP10-5P60370 271 aa10.13□□□□□ -0.79
DHFR-203ENST00000505337 KRTAP9-7A8MTY7 169 aa10.07□□□□□ -0.8
DHFR-203ENST00000505337 KRTAP23-1A1A580 65 aa10.06□□□□□ -0.8
DHFR-203ENST00000505337 MACF1Q9UPN3 7388 aaKnown RBP9.99□□□□□ -0.81
DHFR-203ENST00000505337 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.82
DHFR-203ENST00000505337 PRO2289Q9P1D8 64 aa9.88□□□□□ -0.83
DHFR-203ENST00000505337 LCE3AQ5TA76 89 aa9.8□□□□□ -0.84
DHFR-203ENST00000505337 KRTAP10-7P60409 375 aaPredicted RBP9.74□□□□□ -0.85
DHFR-203ENST00000505337 KRTAP10-12P60413 245 aa9.7□□□□□ -0.86
DHFR-203ENST00000505337 KRTAP15-1Q3LI76 137 aa9.7□□□□□ -0.86
DHFR-203ENST00000505337 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
DHFR-203ENST00000505337 KRTAP8-1Q8IUC2 63 aa9.62□□□□□ -0.87
DHFR-203ENST00000505337 KRTAP12-3P60328 96 aa9.37□□□□□ -0.91
DHFR-203ENST00000505337 MUC12Q9UKN1 5478 aa9.34□□□□□ -0.91
DHFR-203ENST00000505337 KMT2DO14686 5537 aa9.31□□□□□ -0.92
DHFR-203ENST00000505337 KRTAP5-9P26371 169 aa9.31□□□□□ -0.92
DHFR-203ENST00000505337 KRTAP4-8A0A0G2JLE6 195 aa9.26□□□□□ -0.93
DHFR-203ENST00000505337 KRTAP4-8Q9BYQ9 185 aa9.26□□□□□ -0.93
DHFR-203ENST00000505337 NEBP20929 6669 aa9.23□□□□□ -0.93
DHFR-203ENST00000505337 SPRR5A0A1B0GTR4 108 aa9.22□□□□□ -0.93
DHFR-203ENST00000505337 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
DHFR-203ENST00000505337 MDN1Q9NU22 5596 aa9.14□□□□□ -0.95
DHFR-203ENST00000505337 NDUFAF8A1L188 74 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms