RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
SNX25-203ENST00000504959 SPINK1P00995 79 aa3.2□□□□□ -1.9
SNX25-203ENST00000504959 SMR3BP02814 79 aaPredicted RBP3.2□□□□□ -1.9
SNX25-203ENST00000504959 LCA10Q71F78 164 aa3.19□□□□□ -1.9
SNX25-203ENST00000504959 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
SNX25-203ENST00000504959 VPS13BQ7Z7G8 4022 aa3.19□□□□□ -1.9
SNX25-203ENST00000504959 HRES1P13985 223 aa3.18□□□□□ -1.9
SNX25-203ENST00000504959 A6NED7 52 aa3.18□□□□□ -1.9
SNX25-203ENST00000504959 Q5W150 140 aa3.18□□□□□ -1.9
SNX25-203ENST00000504959 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
SNX25-203ENST00000504959 SPAG11AQ6PDA7 123 aa3.17□□□□□ -1.9
SNX25-203ENST00000504959 ATP11AUNQ6ZP68 121 aa3.17□□□□□ -1.9
SNX25-203ENST00000504959 RETNLBQ9BQ08 111 aa3.17□□□□□ -1.9
SNX25-203ENST00000504959 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
SNX25-203ENST00000504959 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
SNX25-203ENST00000504959 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
SNX25-203ENST00000504959 PKHD1P08F94 4074 aa3.15□□□□□ -1.91
SNX25-203ENST00000504959 SPTSSBQ8NFR3 76 aa3.15□□□□□ -1.91
SNX25-203ENST00000504959 RPS29P62273 56 aaKnown RBP3.14□□□□□ -1.91
SNX25-203ENST00000504959 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
SNX25-203ENST00000504959 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
SNX25-203ENST00000504959 A6NN06 94 aa3.13□□□□□ -1.91
SNX25-203ENST00000504959 ACYP2P14621 99 aa3.13□□□□□ -1.91
SNX25-203ENST00000504959 SPINK7P58062 85 aa3.13□□□□□ -1.91
SNX25-203ENST00000504959 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
SNX25-203ENST00000504959 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SNX25-203ENST00000504959 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
SNX25-203ENST00000504959 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
SNX25-203ENST00000504959 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
SNX25-203ENST00000504959 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
SNX25-203ENST00000504959 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
SNX25-203ENST00000504959 C9orf92A6NGG3 77 aa3.09□□□□□ -1.92
SNX25-203ENST00000504959 C7orf65Q6ZTY9 151 aa3.07□□□□□ -1.92
SNX25-203ENST00000504959 RYR1P21817 5038 aa3.07□□□□□ -1.92
SNX25-203ENST00000504959 A0A1B0GU69 56 aa3.05□□□□□ -1.92
SNX25-203ENST00000504959 Q5VSD8 79 aa3.05□□□□□ -1.92
SNX25-203ENST00000504959 APOBP04114 4563 aaKnown RBP3.05□□□□□ -1.92
SNX25-203ENST00000504959 A8MUU9 505 aa3.04□□□□□ -1.92
SNX25-203ENST00000504959 C20orf166-AS1Q96NR2 134 aa3.04□□□□□ -1.92
SNX25-203ENST00000504959 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
SNX25-203ENST00000504959 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.92
SNX25-203ENST00000504959 HERC2O95714 4834 aa3.03□□□□□ -1.93
SNX25-203ENST00000504959 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
SNX25-203ENST00000504959 HSPG2P98160 4391 aa3.01□□□□□ -1.93
SNX25-203ENST00000504959 UQCR11O14957 56 aa3.01□□□□□ -1.93
SNX25-203ENST00000504959 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
SNX25-203ENST00000504959 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
SNX25-203ENST00000504959 FLG2Q5D862 2391 aaPredicted RBP2.99□□□□□ -1.93
SNX25-203ENST00000504959 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
SNX25-203ENST00000504959 FAT1Q14517 4588 aa2.98□□□□□ -1.93
SNX25-203ENST00000504959 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
SNX25-203ENST00000504959 KRTAP10-12P60413 245 aa2.96□□□□□ -1.93
SNX25-203ENST00000504959 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
SNX25-203ENST00000504959 TNXBP22105 4242 aa2.94□□□□□ -1.94
SNX25-203ENST00000504959 K7ERS5 55 aa2.94□□□□□ -1.94
SNX25-203ENST00000504959 RPL37P61927 97 aaKnown RBP2.94□□□□□ -1.94
SNX25-203ENST00000504959 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
SNX25-203ENST00000504959 DMBT1Q9UGM3 2413 aaPredicted RBP2.92□□□□□ -1.94
SNX25-203ENST00000504959 LRP1Q07954 4544 aaKnown RBP2.91□□□□□ -1.94
SNX25-203ENST00000504959 MT1HL1P0DM35 61 aa2.91□□□□□ -1.94
SNX25-203ENST00000504959 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
SNX25-203ENST00000504959 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
SNX25-203ENST00000504959 H0YAA0 97 aa2.89□□□□□ -1.95
SNX25-203ENST00000504959 FAT3Q8TDW7 4589 aa2.89□□□□□ -1.95
SNX25-203ENST00000504959 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
SNX25-203ENST00000504959 A0A1B0GU33 70 aa2.88□□□□□ -1.95
SNX25-203ENST00000504959 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
SNX25-203ENST00000504959 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
SNX25-203ENST00000504959 S4R3F8 94 aa2.86□□□□□ -1.95
SNX25-203ENST00000504959 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
SNX25-203ENST00000504959 KRTAP10-5P60370 271 aa2.84□□□□□ -1.96
SNX25-203ENST00000504959 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SNX25-203ENST00000504959 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
SNX25-203ENST00000504959 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
SNX25-203ENST00000504959 HERC1Q15751 4861 aa2.76□□□□□ -1.97
SNX25-203ENST00000504959 R4GN34 69 aa2.75□□□□□ -1.97
SNX25-203ENST00000504959 A0A0D9SG42 100 aa2.74□□□□□ -1.97
SNX25-203ENST00000504959 ROMO1P60602 79 aa2.74□□□□□ -1.97
SNX25-203ENST00000504959 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
SNX25-203ENST00000504959 LPAP08519 4548 aa2.74□□□□□ -1.97
SNX25-203ENST00000504959 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 P0C880 135 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 LRP2P98164 4655 aa2.73□□□□□ -1.97
SNX25-203ENST00000504959 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
SNX25-203ENST00000504959 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
SNX25-203ENST00000504959 M0QZ58 72 aa2.69□□□□□ -1.98
SNX25-203ENST00000504959 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
SNX25-203ENST00000504959 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
SNX25-203ENST00000504959 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
SNX25-203ENST00000504959 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
SNX25-203ENST00000504959 MUC17Q685J3 4493 aa2.64□□□□□ -1.99
SNX25-203ENST00000504959 C10orf95Q9H7T3 257 aa2.63□□□□□ -1.99
SNX25-203ENST00000504959 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
SNX25-203ENST00000504959 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
SNX25-203ENST00000504959 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
SNX25-203ENST00000504959 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms