RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
UBE2D3-212ENST00000502563 OCR1Q9BZK8 76 aa5.21□□□□□ -1.58
UBE2D3-212ENST00000502563 C4orf26Q17RF5 130 aa5.19□□□□□ -1.58
UBE2D3-212ENST00000502563 H0Y9P7 68 aa5.17□□□□□ -1.58
UBE2D3-212ENST00000502563 H3BPC8 53 aa5.17□□□□□ -1.58
UBE2D3-212ENST00000502563 C5orf47Q569G3 176 aa5.17□□□□□ -1.58
UBE2D3-212ENST00000502563 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
UBE2D3-212ENST00000502563 MT2AP02795 61 aa5.15□□□□□ -1.59
UBE2D3-212ENST00000502563 C1orf64Q8NEQ6 169 aa5.15□□□□□ -1.59
UBE2D3-212ENST00000502563 MP68P56378 58 aa5.14□□□□□ -1.59
UBE2D3-212ENST00000502563 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
UBE2D3-212ENST00000502563 A8MUN3 132 aa5.11□□□□□ -1.59
UBE2D3-212ENST00000502563 MT1FP04733 61 aa5.11□□□□□ -1.59
UBE2D3-212ENST00000502563 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
UBE2D3-212ENST00000502563 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
UBE2D3-212ENST00000502563 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
UBE2D3-212ENST00000502563 S4R3F8 94 aa5.09□□□□□ -1.59
UBE2D3-212ENST00000502563 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
UBE2D3-212ENST00000502563 CSAG1Q6PB30 78 aa5.06□□□□□ -1.6
UBE2D3-212ENST00000502563 LCA10Q71F78 164 aa5.05□□□□□ -1.6
UBE2D3-212ENST00000502563 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
UBE2D3-212ENST00000502563 FAM236AA0A1B0GUQ0 79 aa5.04□□□□□ -1.6
UBE2D3-212ENST00000502563 FAM236BA0A1B0GV22 79 aa5.04□□□□□ -1.6
UBE2D3-212ENST00000502563 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
UBE2D3-212ENST00000502563 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
UBE2D3-212ENST00000502563 PCP4P48539 62 aa4.99□□□□□ -1.61
UBE2D3-212ENST00000502563 H0YAA0 97 aa4.98□□□□□ -1.61
UBE2D3-212ENST00000502563 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
UBE2D3-212ENST00000502563 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
UBE2D3-212ENST00000502563 NDUFC1O43677 76 aa4.97□□□□□ -1.61
UBE2D3-212ENST00000502563 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
UBE2D3-212ENST00000502563 USH2AO75445 5202 aa4.93□□□□□ -1.62
UBE2D3-212ENST00000502563 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
UBE2D3-212ENST00000502563 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
UBE2D3-212ENST00000502563 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
UBE2D3-212ENST00000502563 ACYP2P14621 99 aa4.88□□□□□ -1.63
UBE2D3-212ENST00000502563 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
UBE2D3-212ENST00000502563 C20orf197Q8N268 126 aa4.85□□□□□ -1.63
UBE2D3-212ENST00000502563 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
UBE2D3-212ENST00000502563 SNURFQ9Y675 71 aa4.84□□□□□ -1.63
UBE2D3-212ENST00000502563 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
UBE2D3-212ENST00000502563 COX7CP15954 63 aa4.83□□□□□ -1.64
UBE2D3-212ENST00000502563 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
UBE2D3-212ENST00000502563 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
UBE2D3-212ENST00000502563 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
UBE2D3-212ENST00000502563 Q5VV11 94 aa4.77□□□□□ -1.65
UBE2D3-212ENST00000502563 MT1BP07438 61 aa4.76□□□□□ -1.65
UBE2D3-212ENST00000502563 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-212ENST00000502563 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
UBE2D3-212ENST00000502563 H7BZZ5 65 aa4.73□□□□□ -1.65
UBE2D3-212ENST00000502563 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
UBE2D3-212ENST00000502563 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
UBE2D3-212ENST00000502563 P0C880 135 aa4.69□□□□□ -1.66
UBE2D3-212ENST00000502563 R4GN34 69 aa4.69□□□□□ -1.66
UBE2D3-212ENST00000502563 COA5Q86WW8 74 aa4.65□□□□□ -1.67
UBE2D3-212ENST00000502563 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
UBE2D3-212ENST00000502563 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
UBE2D3-212ENST00000502563 M0QZ58 72 aa4.63□□□□□ -1.67
UBE2D3-212ENST00000502563 A6NN06 94 aa4.62□□□□□ -1.67
UBE2D3-212ENST00000502563 ATP5EP56381 51 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-212ENST00000502563 TMEM258P61165 79 aa4.61□□□□□ -1.67
UBE2D3-212ENST00000502563 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
UBE2D3-212ENST00000502563 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
UBE2D3-212ENST00000502563 SEC61GP60059 68 aa4.54□□□□□ -1.68
UBE2D3-212ENST00000502563 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
UBE2D3-212ENST00000502563 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
UBE2D3-212ENST00000502563 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
UBE2D3-212ENST00000502563 MT1XP80297 61 aa4.5□□□□□ -1.69
UBE2D3-212ENST00000502563 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
UBE2D3-212ENST00000502563 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
UBE2D3-212ENST00000502563 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
UBE2D3-212ENST00000502563 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
UBE2D3-212ENST00000502563 A0A1B0GU33 70 aa4.43□□□□□ -1.7
UBE2D3-212ENST00000502563 A0A1B0GU69 56 aa4.42□□□□□ -1.7
UBE2D3-212ENST00000502563 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
UBE2D3-212ENST00000502563 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-212ENST00000502563 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
UBE2D3-212ENST00000502563 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
UBE2D3-212ENST00000502563 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
UBE2D3-212ENST00000502563 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
UBE2D3-212ENST00000502563 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
UBE2D3-212ENST00000502563 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
UBE2D3-212ENST00000502563 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
UBE2D3-212ENST00000502563 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-212ENST00000502563 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
UBE2D3-212ENST00000502563 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
UBE2D3-212ENST00000502563 V9GYY9 64 aa4.3□□□□□ -1.72
UBE2D3-212ENST00000502563 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
UBE2D3-212ENST00000502563 A0A0D9SG42 100 aa4.27□□□□□ -1.73
UBE2D3-212ENST00000502563 Q1T7F1 81 aa4.27□□□□□ -1.73
UBE2D3-212ENST00000502563 KMT2DO14686 5537 aa4.25□□□□□ -1.73
UBE2D3-212ENST00000502563 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
UBE2D3-212ENST00000502563 UQCR11O14957 56 aa4.24□□□□□ -1.73
UBE2D3-212ENST00000502563 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
UBE2D3-212ENST00000502563 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
UBE2D3-212ENST00000502563 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
UBE2D3-212ENST00000502563 A8MU10 97 aa4.19□□□□□ -1.74
UBE2D3-212ENST00000502563 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
UBE2D3-212ENST00000502563 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
UBE2D3-212ENST00000502563 NEBP20929 6669 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms