RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 XP32Q5T750 250 aa8.63□□□□□ -1.03
VCAN-204ENST00000502527 RBM12B-AS1Q9P1G2 102 aa8.62□□□□□ -1.03
VCAN-204ENST00000502527 A0A1B0GU33 70 aa8.61□□□□□ -1.03
VCAN-204ENST00000502527 RYR3Q15413 4870 aa8.6□□□□□ -1.03
VCAN-204ENST00000502527 H0YAA0 97 aa8.58□□□□□ -1.04
VCAN-204ENST00000502527 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
VCAN-204ENST00000502527 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
VCAN-204ENST00000502527 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
VCAN-204ENST00000502527 MT1HL1P0DM35 61 aa8.55□□□□□ -1.04
VCAN-204ENST00000502527 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
VCAN-204ENST00000502527 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
VCAN-204ENST00000502527 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
VCAN-204ENST00000502527 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
VCAN-204ENST00000502527 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
VCAN-204ENST00000502527 S4R3F8 94 aa8.44□□□□□ -1.06
VCAN-204ENST00000502527 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
VCAN-204ENST00000502527 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
VCAN-204ENST00000502527 K7ERS5 55 aa8.34□□□□□ -1.07
VCAN-204ENST00000502527 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
VCAN-204ENST00000502527 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
VCAN-204ENST00000502527 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
VCAN-204ENST00000502527 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
VCAN-204ENST00000502527 P0C880 135 aa8.21□□□□□ -1.1
VCAN-204ENST00000502527 LRP2P98164 4655 aa8.2□□□□□ -1.1
VCAN-204ENST00000502527 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
VCAN-204ENST00000502527 A0A0D9SG42 100 aa8.17□□□□□ -1.1
VCAN-204ENST00000502527 LPAP08519 4548 aa8.15□□□□□ -1.1
VCAN-204ENST00000502527 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
VCAN-204ENST00000502527 ABCA13Q86UQ4 5058 aa8.11□□□□□ -1.11
VCAN-204ENST00000502527 ROMO1P60602 79 aa8.1□□□□□ -1.11
VCAN-204ENST00000502527 KRTAP23-1A1A580 65 aa8.05□□□□□ -1.12
VCAN-204ENST00000502527 M0QZ58 72 aa8.02□□□□□ -1.12
VCAN-204ENST00000502527 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
VCAN-204ENST00000502527 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
VCAN-204ENST00000502527 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
VCAN-204ENST00000502527 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
VCAN-204ENST00000502527 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
VCAN-204ENST00000502527 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
VCAN-204ENST00000502527 HERC2O95714 4834 aa7.87□□□□□ -1.15
VCAN-204ENST00000502527 R4GN34 69 aa7.83□□□□□ -1.16
VCAN-204ENST00000502527 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
VCAN-204ENST00000502527 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
VCAN-204ENST00000502527 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
VCAN-204ENST00000502527 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
VCAN-204ENST00000502527 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
VCAN-204ENST00000502527 LCE2BO14633 110 aa7.53□□□□□ -1.2
VCAN-204ENST00000502527 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
VCAN-204ENST00000502527 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
VCAN-204ENST00000502527 MUC2Q02817 5179 aa7.5□□□□□ -1.21
VCAN-204ENST00000502527 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
VCAN-204ENST00000502527 HERC1Q15751 4861 aa7.45□□□□□ -1.22
VCAN-204ENST00000502527 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
VCAN-204ENST00000502527 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
VCAN-204ENST00000502527 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
VCAN-204ENST00000502527 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
VCAN-204ENST00000502527 M0R2T5 61 aa7.19□□□□□ -1.26
VCAN-204ENST00000502527 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
VCAN-204ENST00000502527 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
VCAN-204ENST00000502527 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
VCAN-204ENST00000502527 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
VCAN-204ENST00000502527 MT1HP80294 61 aa7.15□□□□□ -1.26
VCAN-204ENST00000502527 TNP1P09430 55 aa7.14□□□□□ -1.27
VCAN-204ENST00000502527 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
VCAN-204ENST00000502527 RNF213Q63HN8 5207 aa7.13□□□□□ -1.27
VCAN-204ENST00000502527 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
VCAN-204ENST00000502527 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
VCAN-204ENST00000502527 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
VCAN-204ENST00000502527 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
VCAN-204ENST00000502527 MT2AP02795 61 aa7.02□□□□□ -1.29
VCAN-204ENST00000502527 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
VCAN-204ENST00000502527 MT1FP04733 61 aa7□□□□□ -1.29
VCAN-204ENST00000502527 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
VCAN-204ENST00000502527 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
VCAN-204ENST00000502527 MT1BP07438 61 aa6.75□□□□□ -1.33
VCAN-204ENST00000502527 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
VCAN-204ENST00000502527 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
VCAN-204ENST00000502527 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
VCAN-204ENST00000502527 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
VCAN-204ENST00000502527 MT1XP80297 61 aa6.68□□□□□ -1.34
VCAN-204ENST00000502527 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
VCAN-204ENST00000502527 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
VCAN-204ENST00000502527 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
VCAN-204ENST00000502527 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.37
VCAN-204ENST00000502527 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
VCAN-204ENST00000502527 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
VCAN-204ENST00000502527 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
VCAN-204ENST00000502527 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
VCAN-204ENST00000502527 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
VCAN-204ENST00000502527 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
VCAN-204ENST00000502527 USH2AO75445 5202 aa6.17□□□□□ -1.42
VCAN-204ENST00000502527 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
VCAN-204ENST00000502527 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
VCAN-204ENST00000502527 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
VCAN-204ENST00000502527 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
VCAN-204ENST00000502527 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
VCAN-204ENST00000502527 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
VCAN-204ENST00000502527 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
VCAN-204ENST00000502527 KMT2DO14686 5537 aa6□□□□□ -1.45
VCAN-204ENST00000502527 KRTAP19-7Q3SYF9 63 aa5.95□□□□□ -1.46
VCAN-204ENST00000502527 SSPOA2VEC9 5147 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms