RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 FAM236AA0A1B0GUQ0 79 aa3.32□□□□□ -1.88
SH3RF1-202ENST00000502315 FAM236BA0A1B0GV22 79 aa3.32□□□□□ -1.88
SH3RF1-202ENST00000502315 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
SH3RF1-202ENST00000502315 C7orf65Q6ZTY9 151 aa3.32□□□□□ -1.88
SH3RF1-202ENST00000502315 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
SH3RF1-202ENST00000502315 K7EQZ3 153 aa3.31□□□□□ -1.88
SH3RF1-202ENST00000502315 PCP4P48539 62 aa3.29□□□□□ -1.88
SH3RF1-202ENST00000502315 NEBP20929 6669 aa3.27□□□□□ -1.89
SH3RF1-202ENST00000502315 A6NN06 94 aa3.27□□□□□ -1.89
SH3RF1-202ENST00000502315 NDUFS5O43920 106 aa3.27□□□□□ -1.89
SH3RF1-202ENST00000502315 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
SH3RF1-202ENST00000502315 ATOX1O00244 68 aa3.26□□□□□ -1.89
SH3RF1-202ENST00000502315 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
SH3RF1-202ENST00000502315 Q5VV11 94 aa3.26□□□□□ -1.89
SH3RF1-202ENST00000502315 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
SH3RF1-202ENST00000502315 IGKV2D-30A0A075B6S6 120 aa3.25□□□□□ -1.89
SH3RF1-202ENST00000502315 HCG22E2RYF7 251 aa3.25□□□□□ -1.89
SH3RF1-202ENST00000502315 IGKV2-30P06310 120 aa3.25□□□□□ -1.89
SH3RF1-202ENST00000502315 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
SH3RF1-202ENST00000502315 CCDC179H3BU77 68 aa3.23□□□□□ -1.89
SH3RF1-202ENST00000502315 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
SH3RF1-202ENST00000502315 Q5W150 140 aa3.23□□□□□ -1.89
SH3RF1-202ENST00000502315 CASC2Q6XLA1 102 aa3.23□□□□□ -1.89
SH3RF1-202ENST00000502315 CRIPTQ9P021 101 aa3.23□□□□□ -1.89
SH3RF1-202ENST00000502315 MT1BP07438 61 aa3.22□□□□□ -1.89
SH3RF1-202ENST00000502315 COX7CP15954 63 aa3.22□□□□□ -1.89
SH3RF1-202ENST00000502315 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
SH3RF1-202ENST00000502315 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
SH3RF1-202ENST00000502315 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
SH3RF1-202ENST00000502315 TRAV7A0A075B6U4 112 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 OCR1Q9BZK8 76 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 S4R3F8 94 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
SH3RF1-202ENST00000502315 UQCRQO14949 82 aa3.19□□□□□ -1.9
SH3RF1-202ENST00000502315 KLKP1Q107X0 134 aa3.19□□□□□ -1.9
SH3RF1-202ENST00000502315 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
SH3RF1-202ENST00000502315 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
SH3RF1-202ENST00000502315 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
SH3RF1-202ENST00000502315 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SH3RF1-202ENST00000502315 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
SH3RF1-202ENST00000502315 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
SH3RF1-202ENST00000502315 CYSTM1Q9H1C7 97 aa3.17□□□□□ -1.9
SH3RF1-202ENST00000502315 SNURFQ9Y675 71 aa3.17□□□□□ -1.9
SH3RF1-202ENST00000502315 LCA10Q71F78 164 aa3.16□□□□□ -1.9
SH3RF1-202ENST00000502315 H0Y9P7 68 aa3.15□□□□□ -1.91
SH3RF1-202ENST00000502315 H0YAA0 97 aa3.14□□□□□ -1.91
SH3RF1-202ENST00000502315 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
SH3RF1-202ENST00000502315 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
SH3RF1-202ENST00000502315 TRAV22A0A0B4J277 110 aa3.13□□□□□ -1.91
SH3RF1-202ENST00000502315 MP68P56378 58 aa3.12□□□□□ -1.91
SH3RF1-202ENST00000502315 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
SH3RF1-202ENST00000502315 PRO2289Q9P1D8 64 aa3.12□□□□□ -1.91
SH3RF1-202ENST00000502315 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
SH3RF1-202ENST00000502315 H7BZZ5 65 aa3.1□□□□□ -1.91
SH3RF1-202ENST00000502315 KMT2DO14686 5537 aa3.1□□□□□ -1.91
SH3RF1-202ENST00000502315 H3BPC8 53 aa3.09□□□□□ -1.91
SH3RF1-202ENST00000502315 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
SH3RF1-202ENST00000502315 CYP4F30PQ9H0H9 118 aa3.09□□□□□ -1.91
SH3RF1-202ENST00000502315 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
SH3RF1-202ENST00000502315 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
SH3RF1-202ENST00000502315 NDUFC1O43677 76 aa3.07□□□□□ -1.92
SH3RF1-202ENST00000502315 TMEM258P61165 79 aa3.07□□□□□ -1.92
SH3RF1-202ENST00000502315 A8MUN3 132 aa3.06□□□□□ -1.92
SH3RF1-202ENST00000502315 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
SH3RF1-202ENST00000502315 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
SH3RF1-202ENST00000502315 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
SH3RF1-202ENST00000502315 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
SH3RF1-202ENST00000502315 SPRR2EP22531 72 aa3.02□□□□□ -1.93
SH3RF1-202ENST00000502315 SPRR2BP35325 72 aa3.02□□□□□ -1.93
SH3RF1-202ENST00000502315 SPRR2AP35326 72 aa3.02□□□□□ -1.93
SH3RF1-202ENST00000502315 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
SH3RF1-202ENST00000502315 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
SH3RF1-202ENST00000502315 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
SH3RF1-202ENST00000502315 SPANXA2-OT1Q8N9U9 137 aa3.01□□□□□ -1.93
SH3RF1-202ENST00000502315 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
SH3RF1-202ENST00000502315 MT1XP80297 61 aa2.99□□□□□ -1.93
SH3RF1-202ENST00000502315 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
SH3RF1-202ENST00000502315 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
SH3RF1-202ENST00000502315 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
SH3RF1-202ENST00000502315 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
SH3RF1-202ENST00000502315 R4GN34 69 aa2.96□□□□□ -1.94
SH3RF1-202ENST00000502315 COA5Q86WW8 74 aa2.95□□□□□ -1.94
SH3RF1-202ENST00000502315 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
SH3RF1-202ENST00000502315 SPRR2DP22532 72 aa2.93□□□□□ -1.94
SH3RF1-202ENST00000502315 ACYP2P14621 99 aa2.92□□□□□ -1.94
SH3RF1-202ENST00000502315 SMIM26A0A096LP01 95 aa2.9□□□□□ -1.95
SH3RF1-202ENST00000502315 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
SH3RF1-202ENST00000502315 M0QZ58 72 aa2.88□□□□□ -1.95
SH3RF1-202ENST00000502315 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
SH3RF1-202ENST00000502315 P0C880 135 aa2.86□□□□□ -1.95
SH3RF1-202ENST00000502315 Q1T7F1 81 aa2.83□□□□□ -1.96
SH3RF1-202ENST00000502315 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
SH3RF1-202ENST00000502315 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
SH3RF1-202ENST00000502315 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
SH3RF1-202ENST00000502315 PSPHP1O15172 72 aa2.81□□□□□ -1.96
SH3RF1-202ENST00000502315 LINC01554Q52M75 96 aa2.8□□□□□ -1.96
SH3RF1-202ENST00000502315 V9GYY9 64 aa2.8□□□□□ -1.96
SH3RF1-202ENST00000502315 A0A1B0GU69 56 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms